Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0367 Punica granatum HOM05D062619 ORTHO05D000119 4.9e-84 314.3 145 100.0
PGR044G2740 Punica granatum HOM05D062619 ORTHO05D000119 1.5e-77 292.7 145 93.8
PGR044G0894 Punica granatum HOM05D000256 ORTHO05D000119 3.0e-33 145.6 145 49.0
PGR044G1580 Punica granatum HOM05D000256 ORTHO05D000119 3.0e-33 145.6 145 49.0
PGR044G1721 Punica granatum HOM05D000256 ORTHO05D000119 3.0e-33 145.6 145 49.0
PGR044G2481 Punica granatum HOM05D000256 ORTHO05D000119 3.0e-33 145.6 145 49.0
PGR044G2379 Punica granatum HOM05D000256 ORTHO05D000119 4.5e-29 131.7 148 43.9
PGR044G1720 Punica granatum HOM05D000256 ORTHO05D000119 7.6e-29 131.0 148 43.2
PGR044G2103 Punica granatum HOM05D000256 ORTHO05D000119 2.5e-24 115.9 129 40.3
PGR044G0281 Punica granatum HOM05D000256 ORTHO05D000119 6.5e-20 101.3 98 45.9
PGR044G1380 Punica granatum HOM05D000256 ORTHO05D000119 6.5e-20 101.3 98 45.9
PGR044G2395 Punica granatum HOM05D000256 ORTHO05D000119 6.5e-20 101.3 98 45.9
PGR044G1218 Punica granatum HOM05D000256 ORTHO05D000119 1.9e-16 89.7 98 41.8
PGR044G0923 Punica granatum HOM05D000256 ORTHO05D000119 1.1e-14 84.0 141 32.6
PGR044G2589 Punica granatum HOM05D000256 ORTHO05D000119 3.1e-14 82.4 136 33.1
PGR044G2343 Punica granatum HOM05D000256 ORTHO05D000119 4.1e-14 82.0 93 37.6
PGR044G1476 Punica granatum HOM05D000256 ORTHO05D000119 6.9e-14 81.3 98 42.9
Lalb_Chr17g0342391 Lupinus albus HOM05D024836 ORTHO05D000119 2.0e-13 79.7 138 32.6
vmacro22823 Vaccinium macrocarpon HOM05D000256 ORTHO05D000119 6.5e-12 74.7 112 37.5
Lalb_Chr17g0342401 Lupinus albus HOM05D024836 ORTHO05D000119 1.4e-11 73.6 137 27.7
CANSAT21G1227 Cannabis sativa HOM05D000256 ORTHO05D000119 2.5e-11 72.8 98 33.7
MELO3C027517.2 Cucumis melo HOM05D000256 ORTHO05D000119 2.5e-11 72.8 103 38.8
MELO3C027521.2 Cucumis melo HOM05D000256 ORTHO05D000119 2.5e-11 72.8 103 38.8
MELO3C030137.2 Cucumis melo HOM05D000256 ORTHO05D000119 2.5e-11 72.8 75 45.3
MELO3C024072.2 Cucumis melo HOM05D000256 ORTHO05D000119 4.2e-11 72.0 96 39.6
MELO3C029931.2 Cucumis melo HOM05D000256 ORTHO05D000119 4.2e-11 72.0 96 39.6
MELO3C027025.2 Cucumis melo HOM05D000256 ORTHO05D000119 5.5e-11 71.6 96 39.6
Sabra18G0125700 Salix brachista HOM05D000256 ORTHO05D000119 7.2e-11 71.2 109 33.9
PGR042G0022 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 122 32.8
PGR042G0549 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 122 32.8
PGR042G0996 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 122 32.8
PGR042G1053 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 122 32.8
PGR042G1377 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 122 32.8
PGR042G1542 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 122 32.8
PGR042G1949 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 122 32.8
PGR042G2280 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 122 32.8
PGR042G2642 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 122 32.8
PGR042G3183 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 122 32.8
PGR042G3343 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 122 32.8
PGR042G3721 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 122 32.8
Sabra18G0124400 Salix brachista HOM05D000256 ORTHO05D000119 1.2e-10 70.5 100 36.0
Sabra18G0129400 Salix brachista HOM05D000256 ORTHO05D000119 2.1e-10 69.7 103 36.9
Gohir.A04G051850 Gossypium hirsutum HOM05D000256 ORTHO05D000119 2.7e-10 69.3 124 35.5
Sc25g0004910 Simmondsia chinensis HOM05D000256 ORTHO05D000119 4.6e-10 68.6 85 38.8
Sabra18G0122400 Salix brachista HOM05D000256 ORTHO05D000119 7.9e-10 67.8 100 35.0
Sc25g0004920 Simmondsia chinensis HOM05D000256 ORTHO05D000119 1.4e-09 67.0 93 35.5
AL3G30060 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 1.8e-09 66.6 122 30.3
Manes.03G153351 Manihot esculenta HOM05D000256 ORTHO05D000119 3.0e-09 65.9 111 30.6
Lalb_Chr15g0076131 Lupinus albus HOM05D000256 ORTHO05D000119 3.9e-09 65.5 111 28.8
Potri.018G148630 Populus trichocarpa HOM05D000256 ORTHO05D000119 3.9e-09 65.5 136 30.1
Actinidia25723 Actinidia chinensis HOM05D000256 ORTHO05D000119 2.0e-08 63.2 94 33.0
Nn1g08719 Nelumbo nucifera HOM05D000256 ORTHO05D000119 2.0e-08 63.2 98 32.7
Cpa.g.sc104.9 Carica papaya HOM05D000545 ORTHO05D004272 2.5e-08 62.8 98 35.7
Manes.03G153800 Manihot esculenta HOM05D000256 ORTHO05D000119 5.7e-08 61.6 137 30.7
Gohir.D05G317450 Gossypium hirsutum HOM05D000256 ORTHO05D000119 7.4e-08 61.2 119 34.5
MD07G1006200 Malus domestica HOM05D000256 ORTHO05D000119 7.4e-08 61.2 74 39.2
Gohir.A04G051675 Gossypium hirsutum HOM05D000256 ORTHO05D000119 9.7e-08 60.8 119 34.5
Cpa.g.sc146.2 Carica papaya HOM05D000256 ORTHO05D000119 1.3e-07 60.5 133 25.6
Gorai.009G340000 Gossypium raimondii HOM05D000256 ORTHO05D000119 1.3e-07 60.5 101 34.7
Gorai.009G340100 Gossypium raimondii HOM05D000256 ORTHO05D000119 1.3e-07 60.5 119 34.5
PGR042G3114 Punica granatum HOM05D000256 ORTHO05D005461 1.3e-07 60.5 75 34.7
PGR042G2906 Punica granatum HOM05D000256 ORTHO05D000119 2.2e-07 59.7 122 29.5
Gorai.005G259300 Gossypium raimondii HOM05D000256 ORTHO05D000119 2.8e-07 59.3 85 32.9
Duzib268G1414 Durio zibethinus HOM05D000256 ORTHO05D000119 3.7e-07 58.9 102 34.3
CARHR004010 Cardamine hirsuta HOM05D000256 ORTHO05D000119 4.8e-07 58.5 90 33.3
BcaC09g48660 Brassica carinata HOM05D000256 ORTHO05D000119 6.3e-07 58.2 136 26.5
BolC1t04690H Brassica oleracea HOM05D000256 ORTHO05D000119 6.3e-07 58.2 136 26.5
Lalb_Chr22g0360131 Lupinus albus HOM05D000256 ORTHO05D000119 6.3e-07 58.2 113 30.1
PGR083G1396 Punica granatum HOM05D000256 ORTHO05D000119 6.3e-07 58.2 94 33.0
Ciclev10006408m.g Citrus clementina HOM05D000256 ORTHO05D000119 1.8e-06 56.6 63 38.1
Sabra18G0129000 Salix brachista HOM05D000256 ORTHO05D000119 1.8e-06 56.6 69 39.1
TAR365G1093 Trochodendron aralioides HOM05D000256 ORTHO05D000119 1.8e-06 56.6 82 35.4
Carub.0003s1671 Capsella rubella HOM05D000256 ORTHO05D000119 3.1e-06 55.8 85 35.3
Sc18g0002440 Simmondsia chinensis HOM05D000256 ORTHO05D000119 3.1e-06 55.8 96 31.2
Phvul.008G062900 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 4.1e-06 55.5 116 31.0
PSO104G0213 Papaver somniferum HOM05D000256 ORTHO05D000119 6.9e-06 54.7 118 25.4
Potri.018G148366 Populus trichocarpa HOM05D000256 ORTHO05D000119 6.9e-06 54.7 82 35.4
QL01p019403 Quercus lobata HOM05D000256 ORTHO05D000119 6.9e-06 54.7 75 33.3


User provided reference genes

Program Settings