Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0323 Punica granatum HOM05D017134 ORTHO05D013817 2.7e-55 218.4 106 100.0
COL.COLO4_00197 Corchorus olitorius HOM05D017134 ORTHO05D013817 4.7e-12 74.7 82 48.8
Manes.03G016650 Manihot esculenta HOM05D017134 ORTHO05D013817 4.0e-11 71.6 104 48.1
Ciclev10010300m.g Citrus clementina HOM05D017134 ORTHO05D013817 6.8e-11 70.9 83 53.0
Thecc.09G150200 Theobroma cacao HOM05D017134 ORTHO05D013817 6.8e-11 70.9 102 44.1
GSVIVG01035828001 Vitis vinifera HOM05D017134 ORTHO05D013817 5.8e-10 67.8 100 44.0
TAR383G0202 Trochodendron aralioides HOM05D002549 ORTHO05D002755 5.4e-08 61.2 106 42.5
Prupe.1G478300 Prunus persica HOM05D031942 ORTHO05D035448 7.1e-08 60.8 90 47.8
Aqoxy7G03731 Aquilegia oxysepala HOM05D002549 ORTHO05D002755 9.2e-08 60.5 103 38.8
CSS0040588 Camellia sinensis var. sinensis HOM05D017135 ORTHO05D013817 9.2e-08 60.5 82 41.5
CSS0044380 Camellia sinensis var. sinensis HOM05D017135 ORTHO05D013817 9.2e-08 60.5 82 41.5
Potri.018G029600 Populus trichocarpa HOM05D017134 ORTHO05D013817 2.7e-07 58.9 77 45.5
Sabra01G0139600 Salix brachista HOM05D002549 ORTHO05D002755 3.5e-07 58.5 111 36.9
Potri.006G251751 Populus trichocarpa HOM05D017134 ORTHO05D013817 4.6e-07 58.2 91 41.8
RcHm_v2.0_Chr2g0136461 Rosa chinensis HOM05D002549 ORTHO05D002755 4.6e-07 58.2 113 36.3
Actinidia08809 Actinidia chinensis HOM05D002549 ORTHO05D002755 6.0e-07 57.8 102 36.3
Migut.I00796 Erythranthe guttata HOM05D002549 ORTHO05D002755 6.0e-07 57.8 103 39.8
SGA_v2.0_scaffold5G02666 Striga asiatica HOM05D002549 ORTHO05D002755 7.8e-07 57.4 114 38.6
Potri.001G172100 Populus trichocarpa HOM05D002549 ORTHO05D002755 1.0e-06 57.0 118 35.6
CiPaw.01G245100 Carya illinoinensis HOM05D002549 ORTHO05D002755 1.3e-06 56.6 108 38.0
TAR625G1243 Trochodendron aralioides HOM05D002549 ORTHO05D002755 1.7e-06 56.2 71 46.5
Lj3g0000921 Lotus japonicus HOM05D002549 ORTHO05D002755 3.9e-06 55.1 106 40.6
Aqoxy7G02107 Aquilegia oxysepala HOM05D002549 ORTHO05D002755 5.1e-06 54.7 102 42.2
ClCG06G010950 Citrullus lanatus HOM05D002549 ORTHO05D002755 6.6e-06 54.3 106 39.6
CsaV3_7G032570 Cucumis sativus L. HOM05D002549 ORTHO05D002755 6.6e-06 54.3 106 39.6
Manes.04G115900 Manihot esculenta HOM05D002549 ORTHO05D002755 6.6e-06 54.3 111 37.8
CsaV3_1G029830 Cucumis sativus L. HOM05D002549 ORTHO05D002755 8.6e-06 53.9 108 37.0


User provided reference genes

Program Settings