Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0315 Punica granatum HOM05D000880 ORTHO05D009684 3.7e-122 443.0 309 100.0
MD08G1133900 Malus domestica HOM05D000880 ORTHO05D009684 8.4e-42 176.0 306 58.2
Eucgr.H00073 Eucalyptus grandis HOM05D000880 ORTHO05D009684 1.6e-37 161.8 309 56.3
Prupe.1G462500 Prunus persica HOM05D000880 ORTHO05D009684 1.6e-37 161.8 309 55.7
Cfa013251 Carpinus fangiana HOM05D000880 ORTHO05D008158 1.8e-36 158.3 302 57.0
QL12p024656 Quercus lobata HOM05D000880 ORTHO05D009684 3.1e-36 157.5 316 54.4
Dinv15656 Davidia involucrata HOM05D000880 ORTHO05D009684 1.7e-34 151.8 289 59.2
FAN20G2124 Fragaria x ananassa HOM05D000880 ORTHO05D009684 4.9e-34 150.2 305 55.1
Actinidia06447 Actinidia chinensis HOM05D000880 ORTHO05D009684 1.4e-33 148.7 297 58.2
CiPaw.07G214800 Carya illinoinensis HOM05D000880 ORTHO05D009684 2.4e-33 147.9 312 55.1
Cpa.g.sc10.206 Carica papaya HOM05D000880 ORTHO05D009684 9.3e-33 146.0 300 58.3
Manes.07G088100 Manihot esculenta HOM05D000880 ORTHO05D009684 4.6e-32 143.7 294 56.5
Atru.chr7.2671 Acer truncatum HOM05D000880 ORTHO05D009684 7.9e-32 142.9 304 53.9
Ciclev10007859m.g Citrus clementina HOM05D000880 ORTHO05D009684 1.7e-31 141.7 301 56.5
FAN24G3119 Fragaria x ananassa HOM05D000880 ORTHO05D009684 1.7e-31 141.7 309 54.7
Sabra18G0010100 Salix brachista HOM05D000880 ORTHO05D009684 3.9e-31 140.6 304 56.2
Sabra18G0001200 Salix brachista HOM05D000880 ORTHO05D009684 1.1e-30 139.0 304 55.9
Haze_21694 Corylus avellana HOM05D000880 ORTHO05D009684 2.5e-30 137.9 232 65.9
RcHm_v2.0_Chr6g0312241 Rosa chinensis HOM05D000880 ORTHO05D009684 4.3e-30 137.1 314 53.5
CANSAT78G1387 Cannabis sativa HOM05D000880 ORTHO05D009684 7.4e-30 136.3 313 52.7
Thecc.09G004700 Theobroma cacao HOM05D000880 ORTHO05D009684 4.8e-29 133.7 179 43.0
Lalb_Chr03g0032741 Lupinus albus HOM05D000880 ORTHO05D009684 1.1e-28 132.5 318 52.5
TAR626G1204 Trochodendron aralioides HOM05D000880 ORTHO05D009684 5.3e-28 130.2 232 65.5
FAN27G3148 Fragaria x ananassa HOM05D000880 ORTHO05D009684 6.9e-28 129.8 232 62.9
CSS0007644 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 1.2e-27 129.0 240 63.3
Potri.018G004400 Populus trichocarpa HOM05D000880 ORTHO05D009684 1.2e-27 129.0 304 53.3
FvH4_2g30660 Fragaria vesca HOM05D000880 ORTHO05D009684 7.6e-27 126.3 232 62.9
Lj6C69T3 Lonicera japonica HOM05D000880 ORTHO05D009684 9.9e-27 125.9 296 55.4
Rhsim04G0217100 Rhododendron simsii HOM05D000880 ORTHO05D009684 3.8e-26 124.0 297 55.6
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 1.0e-23 115.9 313 48.9
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 2.3e-23 114.8 230 63.0
arahy.Tifrunner.gnm1.ann1.CHY0RW Arachis hypogaea HOM05D000880 ORTHO05D009684 5.1e-23 113.6 313 48.9
vmacro08195 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 5.1e-23 113.6 296 55.1
Lj4A910T18 Lonicera japonica HOM05D000880 ORTHO05D009684 1.1e-22 112.5 293 53.9
Glyma.13G197400 Glycine max HOM05D000880 ORTHO05D009684 3.3e-22 110.9 310 47.7
Phvul.011G207000 Phaseolus vulgaris HOM05D000880 ORTHO05D009684 3.3e-22 110.9 299 51.8
MELO3C011202.2 Cucumis melo HOM05D000880 ORTHO05D009684 5.6e-22 110.2 304 52.6
CsaV3_2G031530 Cucumis sativus L. HOM05D000880 ORTHO05D009684 5.6e-22 110.2 230 62.6
Lj3g0007027 Lotus japonicus HOM05D000880 ORTHO05D009684 5.6e-22 110.2 322 39.4
Migut.E01433 Erythranthe guttata HOM05D000880 ORTHO05D009684 7.4e-22 109.8 284 56.0
Haze_10332 Corylus avellana HOM05D000880 ORTHO05D009684 2.8e-21 107.8 190 71.1
A06p35600 Brassica napus HOM05D000880 ORTHO05D009684 4.8e-21 107.1 309 51.1
Medtr1g010020 Medicago truncatula HOM05D000880 ORTHO05D009684 8.1e-21 106.3 248 58.1
Sed0004667 Sechium edule HOM05D000880 ORTHO05D009684 1.8e-20 105.1 229 55.5
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 2.4e-20 104.8 214 64.5
BraA06t26485Z Brassica rapa HOM05D000880 ORTHO05D009684 5.3e-20 103.6 305 52.1
C07p42940 Brassica napus HOM05D000880 ORTHO05D009684 1.2e-19 102.4 311 50.8
Thhalv10003880m.g Eutrema salsugineum HOM05D000880 ORTHO05D009684 1.2e-19 102.4 308 50.6
EL10Ac6g15284 Beta vulgaris HOM05D000880 ORTHO05D009684 3.4e-19 100.9 225 61.3
BolC7t44823H Brassica oleracea HOM05D000880 ORTHO05D009684 3.4e-19 100.9 305 51.5
Ca_12883_v3 Cicer arietinum L. HOM05D000880 ORTHO05D009684 4.5e-19 100.5 223 53.8
Hund04480 Selenicereus undatus HOM05D000880 ORTHO05D009684 4.5e-19 100.5 214 63.1
VMungo1127G1257 Vigna mungo HOM05D000880 ORTHO05D009684 4.5e-19 100.5 304 51.3
Aqoxy5G01876 Aquilegia oxysepala HOM05D000880 ORTHO05D009684 5.8e-19 100.1 236 61.9
TPR.G12115 Trifolium pratense HOM05D000880 ORTHO05D009684 7.6e-19 99.8 311 46.0
MD15G1110300 Malus domestica HOM05D000880 ORTHO05D009684 1.7e-18 98.6 177 68.9
CARHR188620 Cardamine hirsuta HOM05D000880 ORTHO05D009684 2.9e-18 97.8 308 50.6
Sp2g22620 Schrenkiella parvula HOM05D000880 ORTHO05D009684 3.8e-18 97.4 308 50.0
MSTRG.13951 Avicennia marina HOM05D000880 ORTHO05D009684 4.9e-18 97.1 201 67.7
Nitab4.5_0000502g0180 Nicotiana tabacum HOM05D000880 ORTHO05D009684 4.9e-18 97.1 312 50.6
GSVIVG01003996001 Vitis vinifera HOM05D000880 ORTHO05D009684 4.9e-18 97.1 193 68.4
AT5G24830 Arabidopsis thaliana HOM05D000880 ORTHO05D009684 6.5e-18 96.7 301 50.2
AL6G36470 Arabidopsis lyrata HOM05D000880 ORTHO05D009684 8.4e-18 96.3 312 49.0
Cc08_g06370 Coffea canephora HOM05D000880 ORTHO05D009684 1.1e-17 95.9 203 66.5
ECA232G0576 Erigeron canadensis HOM05D000880 ORTHO05D009684 1.4e-17 95.5 90 50.0
Carub.0006s2268 Capsella rubella HOM05D000880 ORTHO05D009684 1.9e-17 95.1 303 49.8
Psat6g031840 Pisum sativum HOM05D000880 ORTHO05D009684 3.2e-17 94.4 308 48.4
Lsat_1_v5_gn_5_33201 Lactuca sativa HOM05D000880 ORTHO05D009684 4.2e-17 94.0 160 39.4
Oeu040613.1 Olea europaea HOM05D000880 ORTHO05D009684 9.3e-17 92.8 185 37.3
Ah.02g121750 Amaranthus hybridus HOM05D000880 ORTHO05D009684 2.1e-16 91.7 222 60.8
ECA236G3570 Erigeron canadensis HOM05D000705 ORTHO05D002970 2.1e-16 91.7 90 48.9
Nn8g39798 Nelumbo nucifera HOM05D000880 ORTHO05D009684 2.1e-16 91.7 231 58.0
AUR62017906 Chenopodium quinoa HOM05D000880 ORTHO05D009684 2.7e-16 91.3 229 48.5
vmacro08192 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 2.7e-16 91.3 295 48.8
AUR62003593 Chenopodium quinoa HOM05D000880 ORTHO05D009684 6.0e-16 90.1 222 50.0
Aa31LG10G9610 Aethionema arabicum HOM05D000880 ORTHO05D009684 1.3e-15 89.0 327 41.9
Glyma.15G236000 Glycine max HOM05D000880 ORTHO05D009684 1.8e-15 88.6 184 57.1
SGA_v2.0_scaffold121G33022 Striga asiatica HOM05D000880 ORTHO05D009684 5.1e-15 87.0 215 50.2
HanXRQChr07g0202221 Helianthus annuus HOM05D000880 ORTHO05D009684 1.5e-14 85.5 131 41.2
Solyc03g120070.4 Solanum lycopersicum HOM05D000880 ORTHO05D009684 1.5e-14 85.5 297 50.2
Aa31LG10G9680 Aethionema arabicum HOM05D000880 ORTHO05D009684 5.7e-14 83.6 231 56.3
Peaxi162Scf00288g01016 Petunia axillaris HOM05D000880 ORTHO05D009684 1.6e-13 82.0 298 50.0
MBI13_g01685_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D001950 2.1e-13 81.6 95 44.2
BcaNung01260 Brassica carinata HOM05D000880 ORTHO05D009684 1.4e-12 79.0 172 34.3
Nitab4.5_0001956g0020 Nicotiana tabacum HOM05D000880 ORTHO05D009684 1.4e-12 79.0 234 55.1
Sopen03g038940 Solanum pennellii HOM05D000880 ORTHO05D009684 1.4e-12 79.0 300 49.3
Sc07g0001710 Simmondsia chinensis HOM05D000880 ORTHO05D009684 2.4e-12 78.2 100 40.0
PGSC0003DMG400005692 Solanum tuberosum HOM05D000880 ORTHO05D009684 4.1e-12 77.4 300 49.0
HPP92_017364 Vanilla planifolia HOM05D003382 ORTHO05D003930 1.9e-09 68.6 118 34.7
CiPaw.15G081300 Carya illinoinensis HOM05D000880 ORTHO05D009684 1.6e-08 65.5 83 44.6
PSO017G1147 Papaver somniferum HOM05D000880 ORTHO05D001950 3.5e-08 64.3 92 43.5
Cpa.g.sc10.208 Carica papaya HOM05D000880 ORTHO05D009684 7.9e-08 63.2 74 43.2


User provided reference genes

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