Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 3.8e-71 271.6 152 100.0
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 1.6e-40 169.9 148 71.6
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 2.9e-39 165.6 157 69.4
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 3.8e-39 165.2 152 72.4
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 1.9e-38 162.9 152 68.4
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 3.6e-37 158.7 160 70.0
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 3.6e-37 158.7 158 64.6
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 3.6e-37 158.7 157 66.2
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 1.8e-36 156.4 160 68.8
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 3.0e-36 155.6 156 64.7
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 2.0e-35 152.9 104 89.4
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 2.0e-35 152.9 156 66.0
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 2.6e-35 152.5 145 69.7
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 3.3e-35 152.1 139 71.2
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 3.3e-35 152.1 139 71.2
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 4.4e-35 151.8 151 68.2
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 5.7e-35 151.4 159 66.7
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 5.7e-35 151.4 158 65.8
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 7.5e-35 151.0 139 70.5
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 7.5e-35 151.0 154 66.2
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 7.5e-35 151.0 156 64.7
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 7.5e-35 151.0 157 65.0
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.3e-34 150.2 161 62.7
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.3e-34 150.2 155 65.2
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.3e-34 150.2 155 65.2
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 1.7e-34 149.8 139 69.8
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 1.7e-34 149.8 139 69.8
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 2.2e-34 149.4 108 84.3
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 3.7e-34 148.7 145 67.6
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 4.8e-34 148.3 103 83.5
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 4.8e-34 148.3 146 65.8
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 4.8e-34 148.3 154 66.2
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 8.2e-34 147.5 155 63.9
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 2.4e-33 146.0 108 83.3
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 3.1e-33 145.6 157 65.6
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 4.1e-33 145.2 153 64.7
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 5.3e-33 144.8 153 62.1
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 7.0e-33 144.4 119 75.6
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 9.1e-33 144.1 140 70.0
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 1.2e-32 143.7 132 69.7
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 1.2e-32 143.7 119 75.6
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 1.2e-32 143.7 108 78.7
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.6e-32 143.3 110 67.3
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 2.0e-32 142.9 136 72.1
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 2.7e-32 142.5 109 79.8
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 4.5e-32 141.7 145 65.5
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 5.9e-32 141.4 158 61.4
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 5.9e-32 141.4 158 61.4
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 5.9e-32 141.4 139 69.8
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 1.0e-31 140.6 153 62.1
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 1.3e-31 140.2 161 66.5
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 2.2e-31 139.4 137 65.0
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 2.9e-31 139.0 163 60.7
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 2.9e-31 139.0 158 60.8
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 1.1e-30 137.1 144 63.9
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 2.5e-30 136.0 145 65.5
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 4.2e-30 135.2 114 75.4
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 4.2e-30 135.2 115 61.7
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 9.4e-30 134.0 104 63.5
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 1.6e-29 133.3 100 83.0
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 2.1e-29 132.9 135 66.7
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 2.1e-29 132.9 152 61.8
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 2.7e-29 132.5 154 59.7
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 3.6e-29 132.1 146 64.4
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 3.6e-29 132.1 131 67.9
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 4.7e-29 131.7 103 77.7
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 4.7e-29 131.7 144 63.2
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 1.8e-28 129.8 142 62.7
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 1.8e-28 129.8 98 81.6
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 2.3e-28 129.4 152 59.9
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 2.3e-28 129.4 143 60.8
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 2.3e-28 129.4 98 80.6
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 5.2e-28 128.3 91 87.9
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 5.2e-28 128.3 123 69.9
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 6.8e-28 127.9 101 78.2
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 1.2e-27 127.1 103 77.7
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 1.2e-27 127.1 145 62.8
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 2.0e-27 126.3 152 59.9
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 2.6e-27 125.9 145 61.4
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 4.4e-27 125.2 103 72.8
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 5.7e-27 124.8 143 58.7
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 5.7e-27 124.8 146 58.9
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 7.5e-27 124.4 150 56.7
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 1.3e-26 123.6 110 76.4
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 1.7e-26 123.2 150 58.7
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 2.2e-26 122.9 96 77.1
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 2.2e-26 122.9 96 77.1
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 2.2e-26 122.9 189 52.9
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 2.8e-26 122.5 150 56.7
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 3.7e-26 122.1 101 75.2
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 4.8e-26 121.7 150 57.3
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 1.4e-25 120.2 97 77.3
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 1.4e-25 120.2 67 79.1
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 9.1e-25 117.5 95 77.9
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 3.5e-24 115.5 98 74.5
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 1.7e-23 113.2 143 55.9
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 5.0e-23 111.7 103 70.9
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 3.6e-21 105.5 79 83.5
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 6.1e-21 104.8 87 75.9
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 3.0e-20 102.4 93 65.6
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 5.2e-20 101.7 86 76.7
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 1.5e-19 100.1 84 70.2
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 6.3e-18 94.7 70 81.4
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 8.3e-18 94.4 70 82.9
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 4.7e-13 78.6 94 50.0
QL02p017999 Quercus lobata HOM05D007253 ORTHO05D009055 5.0e-07 58.5 78 51.3
Haze_21370 Corylus avellana HOM05D007253 ORTHO05D009055 2.5e-06 56.2 76 47.4
Cfa013009 Carpinus fangiana HOM05D018710 ORTHO05D009055 3.3e-06 55.8 77 48.1


User provided reference genes

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