Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0133 Punica granatum HOM05D000690 ORTHO05D002679 5.4e-116 421.0 211 100.0
CiPaw.15G156500 Carya illinoinensis HOM05D000690 ORTHO05D002679 1.5e-22 110.5 198 40.4
MD16G1238400 Malus domestica HOM05D000690 ORTHO05D002679 2.2e-21 106.7 195 41.0
Cfa020749 Carpinus fangiana HOM05D000690 ORTHO05D002679 3.8e-21 105.9 199 39.2
Haze_19104 Corylus avellana HOM05D000690 ORTHO05D002679 1.1e-20 104.4 199 39.7
MD13G1233400 Malus domestica HOM05D000690 ORTHO05D002679 1.9e-20 103.6 195 39.5
RcHm_v2.0_Chr4g0397681 Rosa chinensis HOM05D000690 ORTHO05D002679 2.7e-19 99.8 194 37.6
CiPaw.16G103700 Carya illinoinensis HOM05D000690 ORTHO05D002679 8.0e-19 98.2 203 36.9
Atru.chr7.957 Acer truncatum HOM05D000690 ORTHO05D002679 1.4e-18 97.4 189 39.7
FAN22G0604 Fragaria x ananassa HOM05D000690 ORTHO05D002679 1.4e-18 97.4 193 38.9
FvH4_4g06100 Fragaria vesca HOM05D000690 ORTHO05D002679 2.3e-18 96.7 193 38.9
FAN12G4257 Fragaria x ananassa HOM05D000690 ORTHO05D002679 2.3e-18 96.7 193 38.9
Prupe.1G064600 Prunus persica HOM05D000690 ORTHO05D002679 3.0e-18 96.3 188 36.2
FAN17G1426 Fragaria x ananassa HOM05D000690 ORTHO05D002679 8.8e-18 94.7 193 38.3
CDE05G0061 Ceratophyllum demersum HOM05D000690 ORTHO05D002679 3.7e-16 89.4 202 35.6
Thecc.09G195800 Theobroma cacao HOM05D000690 ORTHO05D002679 6.3e-16 88.6 181 35.9
CANSAT80G0586 Cannabis sativa HOM05D000690 ORTHO05D002679 1.1e-15 87.8 209 33.0
CDE05G1367 Ceratophyllum demersum HOM05D000690 ORTHO05D002679 1.4e-15 87.4 203 35.5
FAN07G2002 Fragaria x ananassa HOM05D000690 ORTHO05D002679 1.4e-15 87.4 193 37.3
Actinidia07569 Actinidia chinensis HOM05D000690 ORTHO05D002679 2.4e-15 86.7 186 36.0
QL11p008788 Quercus lobata HOM05D000690 ORTHO05D002679 2.4e-15 86.7 197 35.0
Ciclev10009331m.g Citrus clementina HOM05D000690 ORTHO05D002679 4.1e-15 85.9 191 33.5
vmacro22699 Vaccinium macrocarpon HOM05D000690 ORTHO05D002679 4.1e-15 85.9 159 35.2
MBI16_g00846_MAGBIO Magnolia biondii HOM05D000690 ORTHO05D002679 5.3e-15 85.5 192 35.4
Sed0009416 Sechium edule HOM05D000690 ORTHO05D002679 7.0e-15 85.1 196 34.2
Actinidia02479 Actinidia chinensis HOM05D000690 ORTHO05D002679 1.2e-14 84.3 187 35.8
MELO3C003931.2 Cucumis melo HOM05D000690 ORTHO05D002679 1.6e-14 84.0 197 31.5
CsaV3_2G009080 Cucumis sativus L. HOM05D000690 ORTHO05D002679 1.6e-14 84.0 197 31.5
DCAR_009045 Daucus carota HOM05D000690 ORTHO05D002679 2.0e-14 83.6 233 32.6
GSVIVG01032258001 Vitis vinifera HOM05D000690 ORTHO05D002679 2.6e-14 83.2 203 35.0
ClCG11G011410 Citrullus lanatus HOM05D000690 ORTHO05D002679 1.3e-13 80.9 197 31.5
DCAR_020463 Daucus carota HOM05D000690 ORTHO05D002679 1.7e-13 80.5 205 33.2
Cfa009294 Carpinus fangiana HOM05D000690 ORTHO05D002679 2.2e-13 80.1 103 42.7
Solyc07g017220.3 Solanum lycopersicum HOM05D000690 ORTHO05D002679 2.2e-13 80.1 182 35.2
Potri.018G146800 Populus trichocarpa HOM05D000690 ORTHO05D002679 2.9e-13 79.7 188 31.4
Sopen00g005940 Solanum pennellii HOM05D000690 ORTHO05D002679 2.9e-13 79.7 182 35.2
Rhsim01G0110200 Rhododendron simsii HOM05D000690 ORTHO05D002679 6.5e-13 78.6 164 34.1
TAR383G0298 Trochodendron aralioides HOM05D000690 ORTHO05D002679 6.5e-13 78.6 190 32.1
HPP92_010800 Vanilla planifolia HOM05D000690 ORTHO05D000388 1.9e-12 77.0 152 32.2
PGSC0003DMG400009560 Solanum tuberosum HOM05D000690 ORTHO05D002679 3.2e-12 76.3 182 33.5
ATR0626G267 Amborella trichopoda HOM05D000690 ORTHO05D002679 9.4e-12 74.7 197 32.5
Cfa010120 Carpinus fangiana HOM05D000690 ORTHO05D002679 2.1e-11 73.6 96 43.8
Peaxi162Scf00320g00121 Petunia axillaris HOM05D000690 ORTHO05D002679 2.7e-11 73.2 213 31.0
CDE02G0199 Ceratophyllum demersum HOM05D000690 ORTHO05D002679 3.6e-11 72.8 162 30.9
Os02g0174800 Oryza sativa ssp. japonica HOM05D000690 ORTHO05D002679 3.6e-11 72.8 168 36.3
Potri.006G078300 Populus trichocarpa HOM05D000690 ORTHO05D002679 6.1e-11 72.0 194 28.4
Sabra18G0128200 Salix brachista HOM05D000690 ORTHO05D002679 8.0e-11 71.6 195 27.7
SalBow6G0007 Salvia bowleyana HOM05D000690 ORTHO05D002679 8.0e-11 71.6 186 32.8
Sabra06G0059200 Salix brachista HOM05D000690 ORTHO05D002679 1.0e-10 71.2 194 27.8
PGSC0003DMG400020401 Solanum tuberosum HOM05D000690 ORTHO05D002679 1.8e-10 70.5 191 30.4
Cc00_g00160 Coffea canephora HOM05D000690 ORTHO05D000388 2.3e-10 70.1 86 45.3
Aqoxy7G02612 Aquilegia oxysepala HOM05D000690 ORTHO05D002679 3.0e-10 69.7 188 30.3
Dinv12609 Davidia involucrata HOM05D000690 ORTHO05D002679 3.0e-10 69.7 212 28.8
Oeu028824.2 Olea europaea HOM05D000690 ORTHO05D002679 5.2e-10 68.9 193 29.5
Nitab4.5_0005753g0020 Nicotiana tabacum HOM05D000690 ORTHO05D002679 1.2e-09 67.8 187 29.9
Solyc12g017850.2 Solanum lycopersicum HOM05D000690 ORTHO05D002679 1.2e-09 67.8 195 29.7
Nitab4.5_0000219g0120 Nicotiana tabacum HOM05D000690 ORTHO05D002679 1.5e-09 67.4 190 28.4
HanXRQChr12g0359181 Helianthus annuus HOM05D000690 ORTHO05D002679 2.0e-09 67.0 164 31.7
Hma1.2p1_0314F.1_g122000 Hydrangea macrophylla HOM05D000690 ORTHO05D002679 2.6e-09 66.6 94 39.4
Sp1g17100 Schrenkiella parvula HOM05D000690 ORTHO05D002679 3.4e-09 66.2 193 33.2
Lj5A749T42 Lonicera japonica HOM05D000690 ORTHO05D002679 7.5e-09 65.1 92 39.1
Sopen12g008660 Solanum pennellii HOM05D000690 ORTHO05D002679 7.5e-09 65.1 197 29.4
Nitab4.5_0001535g0010 Nicotiana tabacum HOM05D000690 ORTHO05D002679 1.3e-08 64.3 101 35.6
Sabra18G0121100 Salix brachista HOM05D000690 ORTHO05D002679 1.3e-08 64.3 188 27.1
HanXRQChr10g0309571 Helianthus annuus HOM05D000690 ORTHO05D002679 1.7e-08 63.9 140 30.7
TWI34G1037 Tripterygium wilfordii HOM05D000690 ORTHO05D002679 1.7e-08 63.9 187 29.9
HPP92_017377 Vanilla planifolia HOM05D000690 ORTHO05D002679 2.2e-08 63.5 91 36.3
Hma1.2p1_0263F.1_g105470 Hydrangea macrophylla HOM05D000690 ORTHO05D002679 3.7e-08 62.8 191 31.4
Lsat_1_v5_gn_5_81400 Lactuca sativa HOM05D000690 ORTHO05D002679 3.7e-08 62.8 188 29.8
ECA234G4314 Erigeron canadensis HOM05D000690 ORTHO05D002679 4.8e-08 62.4 195 28.7
Gohir.A03G021300 Gossypium hirsutum HOM05D000690 ORTHO05D002679 4.8e-08 62.4 187 29.9
unitig_578.g15827 Utricularia gibba HOM05D000690 ORTHO05D002679 4.8e-08 62.4 192 30.2
AL1G31780 Arabidopsis lyrata HOM05D000690 ORTHO05D002679 8.3e-08 61.6 187 32.1
Gorai.003G155000 Gossypium raimondii HOM05D000690 ORTHO05D002679 8.3e-08 61.6 187 29.9
CAN.G8.45 Capsicum annuum HOM05D000690 ORTHO05D002679 1.1e-07 61.2 163 32.5
HPP92_010416 Vanilla planifolia HOM05D000690 ORTHO05D000388 1.1e-07 61.2 204 28.4
CANSAT56G1930 Cannabis sativa HOM05D000690 ORTHO05D002679 2.4e-07 60.1 193 31.6
Gohir.D03G147500 Gossypium hirsutum HOM05D000690 ORTHO05D002679 3.1e-07 59.7 187 28.9
Gohir.A06G078600 Gossypium hirsutum HOM05D000690 ORTHO05D002679 4.1e-07 59.3 200 31.0
Manes.03G042600 Manihot esculenta HOM05D000690 ORTHO05D002679 5.4e-07 58.9 215 30.7
Gohir.D06G077700 Gossypium hirsutum HOM05D000690 ORTHO05D002679 7.0e-07 58.5 200 30.5
Gorai.010G090800 Gossypium raimondii HOM05D000690 ORTHO05D002679 9.1e-07 58.2 200 30.5
C06p48950 Brassica napus HOM05D000690 ORTHO05D002679 1.2e-06 57.8 204 29.9
Aa31LG7G3910 Aethionema arabicum HOM05D000690 ORTHO05D002679 1.6e-06 57.4 176 31.8
C06p33030 Brassica napus HOM05D000690 ORTHO05D002679 1.6e-06 57.4 213 30.5
TAR383G0827 Trochodendron aralioides HOM05D000690 ORTHO05D002679 1.6e-06 57.4 132 31.8
BcaC08g46927 Brassica carinata HOM05D000690 ORTHO05D002679 2.0e-06 57.0 204 29.9
BolC6t38420H Brassica oleracea HOM05D000690 ORTHO05D002679 2.0e-06 57.0 213 30.0
BolC6t39932H Brassica oleracea HOM05D000690 ORTHO05D002679 2.0e-06 57.0 204 29.4
Hund26063 Selenicereus undatus HOM05D000690 ORTHO05D002679 3.5e-06 56.2 232 26.3
CARHR019800 Cardamine hirsuta HOM05D000690 ORTHO05D002679 4.5e-06 55.8 148 31.1
Duzib168G1432 Durio zibethinus HOM05D000690 ORTHO05D002679 7.7e-06 55.1 184 31.0
Zm00001eb233410 Zea mays HOM05D000690 ORTHO05D002679 7.7e-06 55.1 147 32.0


User provided reference genes

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