Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0131 Punica granatum HOM05D003529 ORTHO05D004106 2.5e-110 402.1 202 100.0
COL.COLO4_23282 Corchorus olitorius HOM05D003529 ORTHO05D004106 1.1e-14 84.3 137 43.1
Thecc.01G308200 Theobroma cacao HOM05D003529 ORTHO05D004106 1.6e-13 80.5 137 42.3
TPR.G19765 Trifolium pratense HOM05D003529 ORTHO05D004106 6.2e-13 78.6 146 37.7
Ca_10307_v3 Cicer arietinum L. HOM05D003529 ORTHO05D004106 2.4e-12 76.6 145 37.2
Glyma.02G015200 Glycine max HOM05D003529 ORTHO05D004106 3.1e-12 76.3 152 38.8
Manes.01G224100 Manihot esculenta HOM05D003529 ORTHO05D004106 6.9e-12 75.1 151 35.1
Duzib211G0236 Durio zibethinus HOM05D003529 ORTHO05D004106 9.0e-12 74.7 137 40.9
Cfa005855 Carpinus fangiana HOM05D003529 ORTHO05D004106 2.6e-11 73.2 133 40.6
Gohir.D12G131300 Gossypium hirsutum HOM05D003529 ORTHO05D004106 3.4e-11 72.8 138 39.1
Gorai.008G142600 Gossypium raimondii HOM05D003529 ORTHO05D004106 3.4e-11 72.8 138 39.1
Hma1.2p1_0212F.1_g090160 Hydrangea macrophylla HOM05D003529 ORTHO05D004106 3.4e-11 72.8 138 39.9
Dinv10056 Davidia involucrata HOM05D003529 ORTHO05D004106 4.5e-11 72.4 124 42.7
Gohir.A12G127800 Gossypium hirsutum HOM05D003529 ORTHO05D004106 4.5e-11 72.4 138 39.1
Dinv33090 Davidia involucrata HOM05D003529 ORTHO05D004106 7.6e-11 71.6 121 43.0
Duzib133G0282 Durio zibethinus HOM05D003529 ORTHO05D004106 7.6e-11 71.6 137 39.4
Atru.chr5.1067 Acer truncatum HOM05D003529 ORTHO05D004106 1.7e-10 70.5 130 37.7
Glyma.10G015800 Glycine max HOM05D003529 ORTHO05D004106 1.7e-10 70.5 138 38.4
MD03G1298600 Malus domestica HOM05D003529 ORTHO05D004106 1.7e-10 70.5 141 36.2
Ciclev10022679m.g Citrus clementina HOM05D003529 ORTHO05D004106 2.9e-10 69.7 128 39.1
Duzib138G1135 Durio zibethinus HOM05D003529 ORTHO05D004106 2.9e-10 69.7 137 39.4
Phvul.007G217000 Phaseolus vulgaris HOM05D003529 ORTHO05D004106 3.8e-10 69.3 146 38.4
VMungo0720G2108 Vigna mungo HOM05D003529 ORTHO05D004106 3.8e-10 69.3 159 37.1
CANSAT25G0832 Cannabis sativa HOM05D003529 ORTHO05D004106 8.4e-10 68.2 126 37.3
QL12p028794 Quercus lobata HOM05D003529 ORTHO05D004106 1.1e-09 67.8 138 37.7
Haze_04995 Corylus avellana HOM05D003529 ORTHO05D004106 1.4e-09 67.4 131 38.9
Gohir.A11G112000 Gossypium hirsutum HOM05D003529 ORTHO05D004106 2.5e-09 66.6 137 38.7
Medtr1g087775 Medicago truncatula HOM05D003529 ORTHO05D004106 2.5e-09 66.6 148 34.5
Gorai.007G125400 Gossypium raimondii HOM05D003529 ORTHO05D004106 4.2e-09 65.9 137 38.7
Lalb_Chr21g0309411 Lupinus albus HOM05D003529 ORTHO05D004106 4.2e-09 65.9 124 37.9
Haze_04994 Corylus avellana HOM05D003529 ORTHO05D004106 5.5e-09 65.5 132 38.6
Eucgr.K03517 Eucalyptus grandis HOM05D003529 ORTHO05D004106 5.5e-09 65.5 151 35.1
Lj5g0005836 Lotus japonicus HOM05D003529 ORTHO05D004106 5.5e-09 65.5 143 33.6
Gohir.D11G117100 Gossypium hirsutum HOM05D003529 ORTHO05D004106 9.3e-09 64.7 137 38.0
Carub.0005s2931 Capsella rubella HOM05D003529 ORTHO05D004106 1.6e-08 63.9 101 40.6
Eucgr.H01074 Eucalyptus grandis HOM05D003529 ORTHO05D004106 1.6e-08 63.9 151 35.1
Lj1C21T4 Lonicera japonica HOM05D003529 ORTHO05D004106 1.6e-08 63.9 133 36.1
Prupe.8G268600 Prunus persica HOM05D003529 ORTHO05D004106 1.6e-08 63.9 148 34.5
PGR044G1489 Punica granatum HOM05D003529 ORTHO05D004106 1.6e-08 63.9 105 40.0
RcHm_v2.0_Chr7g0242001 Rosa chinensis HOM05D003529 ORTHO05D004106 1.6e-08 63.9 131 35.1
TWI36G0365 Tripterygium wilfordii HOM05D003529 ORTHO05D004106 2.1e-08 63.5 149 37.6
Psat6g162960 Pisum sativum HOM05D003529 ORTHO05D004106 2.7e-08 63.2 145 33.8
Hma1.2p1_0494F.1_g165600 Hydrangea macrophylla HOM05D003529 ORTHO05D004106 3.5e-08 62.8 124 40.3
unitig_578.g16622 Utricularia gibba HOM05D003529 ORTHO05D004106 6.1e-08 62.0 146 36.3
Actinidia21017 Actinidia chinensis HOM05D001306 ORTHO05D001159 7.9e-08 61.6 107 37.4
Cc01_g21210 Coffea canephora HOM05D003529 ORTHO05D004106 7.9e-08 61.6 156 33.3
FAN08G2441 Fragaria x ananassa HOM05D003529 ORTHO05D004106 7.9e-08 61.6 118 37.3
arahy.Tifrunner.gnm1.ann1.VI73GY Arachis hypogaea HOM05D003529 ORTHO05D004106 1.0e-07 61.2 125 37.6
CSS0040208 Camellia sinensis var. sinensis HOM05D003529 ORTHO05D004106 1.0e-07 61.2 138 36.2
PGR119G1167 Punica granatum HOM05D003529 ORTHO05D004106 1.0e-07 61.2 137 34.3
Psat3g020880 Pisum sativum HOM05D003529 ORTHO05D004106 2.3e-07 60.1 129 33.3
Potri.014G124900 Populus trichocarpa HOM05D003529 ORTHO05D004106 3.0e-07 59.7 134 35.8
Sabra14G0092800 Salix brachista HOM05D003529 ORTHO05D004106 3.9e-07 59.3 148 33.8
Migut.D00112 Erythranthe guttata HOM05D003529 ORTHO05D004106 5.1e-07 58.9 145 35.9
Lalb_Chr02g0146621 Lupinus albus HOM05D003529 ORTHO05D004106 5.1e-07 58.9 129 34.1
TAR633G2691 Trochodendron aralioides HOM05D003529 ORTHO05D004106 5.1e-07 58.9 125 36.0
FvH4_5g28940 Fragaria vesca HOM05D003529 ORTHO05D004106 6.7e-07 58.5 114 36.8
Nn4g25678 Nelumbo nucifera HOM05D003529 ORTHO05D004106 8.7e-07 58.2 125 39.2
Thhalv10006300m.g Eutrema salsugineum HOM05D003529 ORTHO05D004106 1.1e-06 57.8 118 34.7
AL5G45400 Arabidopsis lyrata HOM05D003529 ORTHO05D004106 1.9e-06 57.0 125 34.4
Rhsim13G0007500 Rhododendron simsii HOM05D003529 ORTHO05D004106 1.9e-06 57.0 126 38.9
CSS0011800 Camellia sinensis var. sinensis HOM05D003529 ORTHO05D004106 3.3e-06 56.2 138 34.1
Cpa.g.sc151.47 Carica papaya HOM05D003529 ORTHO05D004106 3.3e-06 56.2 115 38.3
Aa31LG10G16460 Aethionema arabicum HOM05D003529 ORTHO05D004106 4.3e-06 55.8 105 36.2
DCAR_002866 Daucus carota HOM05D003529 ORTHO05D004106 4.3e-06 55.8 130 37.7
Sp5g00860 Schrenkiella parvula HOM05D003529 ORTHO05D004106 4.3e-06 55.8 118 34.7
AT3G62650 Arabidopsis thaliana HOM05D003529 ORTHO05D004106 5.7e-06 55.5 125 33.6
Ca_29579_v3 Cicer arietinum L. HOM05D003529 ORTHO05D004106 5.7e-06 55.5 131 31.3
BcaC07g40776 Brassica carinata HOM05D003529 ORTHO05D004106 7.4e-06 55.1 118 34.7
Potri.002G200000 Populus trichocarpa HOM05D003529 ORTHO05D004106 7.4e-06 55.1 127 37.0
A07p26020 Brassica napus HOM05D003529 ORTHO05D004106 9.7e-06 54.7 118 33.1
BolC6t38003H Brassica oleracea HOM05D003529 ORTHO05D004106 9.7e-06 54.7 118 33.1
BraA07t30250Z Brassica rapa HOM05D003529 ORTHO05D004106 9.7e-06 54.7 118 33.1
CARHR172920 Cardamine hirsuta HOM05D003529 ORTHO05D004106 9.7e-06 54.7 99 38.4
SGA_v2.0_scaffold376G50256 Striga asiatica HOM05D003529 ORTHO05D004106 9.7e-06 54.7 148 33.1


User provided reference genes

Program Settings