Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0105 Punica granatum HOM05D003537 ORTHO05D004180 5.0e-56 221.1 129 100.0
Eucgr.C02783 Eucalyptus grandis HOM05D003537 ORTHO05D004180 1.9e-23 112.8 123 54.5
QL02p021910 Quercus lobata HOM05D003537 ORTHO05D004180 5.2e-21 104.8 118 47.5
Haze_21529 Corylus avellana HOM05D003537 ORTHO05D004180 1.2e-20 103.6 131 48.9
Manes.16G121200 Manihot esculenta HOM05D003537 ORTHO05D004180 1.2e-20 103.6 89 78.7
CiPaw.08G011800 Carya illinoinensis HOM05D003537 ORTHO05D004180 3.4e-20 102.1 121 63.6
COL.COLO4_18845 Corchorus olitorius HOM05D003537 ORTHO05D004180 5.7e-20 101.3 129 45.7
Lalb_Chr08g0244061 Lupinus albus HOM05D003537 ORTHO05D004180 9.8e-20 100.5 108 65.7
CsaV3_3G046470 Cucumis sativus L. HOM05D003537 ORTHO05D004180 1.3e-19 100.1 90 61.1
VMungo1309G0037 Vigna mungo HOM05D003537 ORTHO05D004180 2.2e-19 99.4 89 60.7
ClCG05G016980 Citrullus lanatus HOM05D003537 ORTHO05D004180 3.7e-19 98.6 90 65.6
Potri.018G028500 Populus trichocarpa HOM05D003537 ORTHO05D004180 3.7e-19 98.6 84 72.6
Thecc.09G026400 Theobroma cacao HOM05D003537 ORTHO05D004180 6.4e-19 97.8 89 76.4
Sabra18G0030700 Salix brachista HOM05D003537 ORTHO05D004180 8.3e-19 97.4 84 70.2
Cpa.g.sc259.5 Carica papaya HOM05D003537 ORTHO05D004180 1.4e-18 96.7 114 64.9
RcHm_v2.0_Chr6g0298061 Rosa chinensis HOM05D003537 ORTHO05D004180 2.4e-18 95.9 123 58.5
CANSAT25G1571 Cannabis sativa HOM05D003537 ORTHO05D004180 3.2e-18 95.5 123 45.5
Cfa003377 Carpinus fangiana HOM05D003537 ORTHO05D004180 4.1e-18 95.1 89 75.3
Glyma.04G067500 Glycine max HOM05D003537 ORTHO05D004180 7.0e-18 94.4 117 62.4
CSS0014531 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 9.2e-18 94.0 86 60.5
Glyma.06G069100 Glycine max HOM05D003537 ORTHO05D004180 1.2e-17 93.6 92 72.8
Gorai.010G114400 Gossypium raimondii HOM05D003537 ORTHO05D004180 1.2e-17 93.6 85 63.5
GSVIVG01035845001 Vitis vinifera HOM05D003537 ORTHO05D004180 1.2e-17 93.6 91 75.8
FAN15G0527 Fragaria x ananassa HOM05D003537 ORTHO05D004180 2.0e-17 92.8 123 57.7
FAN27G1347 Fragaria x ananassa HOM05D003537 ORTHO05D004180 2.0e-17 92.8 123 57.7
QL10p023445 Quercus lobata HOM05D003537 ORTHO05D004180 2.0e-17 92.8 88 50.0
Ciclev10009875m.g Citrus clementina HOM05D003537 ORTHO05D004180 2.7e-17 92.4 94 68.1
Dinv18245 Davidia involucrata HOM05D003537 ORTHO05D004180 2.7e-17 92.4 88 71.6
FvH4_2g29200 Fragaria vesca HOM05D003537 ORTHO05D004180 2.7e-17 92.4 123 57.7
Medtr3g107397 Medicago truncatula HOM05D003537 ORTHO05D004180 3.5e-17 92.0 124 51.6
Eucgr.C01175 Eucalyptus grandis HOM05D003537 ORTHO05D004180 4.6e-17 91.7 92 48.9
Gohir.A06G098204 Gossypium hirsutum HOM05D003537 ORTHO05D004180 4.6e-17 91.7 85 62.4
Sed0007274 Sechium edule HOM05D003537 ORTHO05D004180 4.6e-17 91.7 111 48.6
Prupe.1G480000 Prunus persica HOM05D003537 ORTHO05D004180 7.8e-17 90.9 92 65.2
arahy.Tifrunner.gnm1.ann1.9FI3T7 Arachis hypogaea HOM05D003537 ORTHO05D004180 1.0e-16 90.5 85 51.8
arahy.Tifrunner.gnm1.ann1.DMU7Q7 Arachis hypogaea HOM05D003537 ORTHO05D004180 1.0e-16 90.5 85 51.8
Haze_25576 Corylus avellana HOM05D003537 ORTHO05D004180 1.0e-16 90.5 89 56.2
Lj1g0012711 Lotus japonicus HOM05D003537 ORTHO05D004180 1.0e-16 90.5 104 51.9
Gohir.A13G199600 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.7e-16 89.7 94 47.9
Manes.06G058601 Manihot esculenta HOM05D003537 ORTHO05D004180 1.7e-16 89.7 102 49.0
Manes.14G132200 Manihot esculenta HOM05D003537 ORTHO05D004180 1.7e-16 89.7 89 62.9
Duzib150G0412 Durio zibethinus HOM05D003537 ORTHO05D004180 2.3e-16 89.4 94 47.9
Gohir.D13G205100 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.3e-16 89.4 94 47.9
Gorai.013G234000 Gossypium raimondii HOM05D003537 ORTHO05D004180 2.3e-16 89.4 94 47.9
HanXRQChr16g0505371 Helianthus annuus HOM05D003537 ORTHO05D004180 2.3e-16 89.4 89 52.8
Cc06_g08500 Coffea canephora HOM05D003537 ORTHO05D004180 3.0e-16 89.0 123 42.3
ECA246G5170 Erigeron canadensis HOM05D003537 ORTHO05D004180 3.0e-16 89.0 88 53.4
Potri.018G068300 Populus trichocarpa HOM05D003537 ORTHO05D004180 3.0e-16 89.0 92 50.0
Actinidia40471 Actinidia chinensis HOM05D003537 ORTHO05D004180 6.6e-16 87.8 89 48.3
Gohir.A06G055900 Gossypium hirsutum HOM05D003537 ORTHO05D004180 6.6e-16 87.8 94 47.9
Gohir.D06G054550 Gossypium hirsutum HOM05D003537 ORTHO05D004180 6.6e-16 87.8 94 47.9
TPR.G3106 Trifolium pratense HOM05D003537 ORTHO05D004180 6.6e-16 87.8 101 56.4
Dinv41510 Davidia involucrata HOM05D003537 ORTHO05D004180 8.6e-16 87.4 89 68.5
CiPaw.04G171200 Carya illinoinensis HOM05D003537 ORTHO05D004180 1.1e-15 87.0 94 50.0
Nn8g39452 Nelumbo nucifera HOM05D003537 ORTHO05D004180 1.1e-15 87.0 89 70.8
Actinidia21987 Actinidia chinensis HOM05D003537 ORTHO05D004180 1.5e-15 86.7 88 46.6
EL10Ac8g18657 Beta vulgaris HOM05D003537 ORTHO05D004180 1.5e-15 86.7 101 48.5
Gorai.010G063900 Gossypium raimondii HOM05D003537 ORTHO05D004180 1.5e-15 86.7 94 51.1
HPP92_000667 Vanilla planifolia HOM05D003537 ORTHO05D004180 1.5e-15 86.7 81 70.4
Nitab4.5_0010481g0030 Nicotiana tabacum HOM05D003537 ORTHO05D004180 1.9e-15 86.3 121 47.9
Solyc12g009440.2 Solanum lycopersicum HOM05D003537 ORTHO05D004180 1.9e-15 86.3 115 55.7
Sopen12g004440 Solanum pennellii HOM05D003537 ORTHO05D004180 1.9e-15 86.3 115 55.7
THA.LOC104808988 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 1.9e-15 86.3 94 60.6
arahy.Tifrunner.gnm1.ann1.4IXQ36 Arachis hypogaea HOM05D003537 ORTHO05D004180 2.5e-15 85.9 90 56.7
arahy.Tifrunner.gnm1.ann1.EPB35R Arachis hypogaea HOM05D003537 ORTHO05D004180 2.5e-15 85.9 90 56.7
arahy.Tifrunner.gnm1.ann1.P86YY0 Arachis hypogaea HOM05D003537 ORTHO05D004180 2.5e-15 85.9 90 56.7
Glyma.06G222000 Glycine max HOM05D003537 ORTHO05D004180 2.5e-15 85.9 87 72.4
Lalb_Chr07g0178961 Lupinus albus HOM05D003537 ORTHO05D004180 3.3e-15 85.5 85 68.2
Atru.chr7.1160 Acer truncatum HOM05D003537 ORTHO05D004180 4.3e-15 85.1 104 55.8
Nitab4.5_0002658g0060 Nicotiana tabacum HOM05D003537 ORTHO05D004180 4.3e-15 85.1 121 43.0
GSVIVG01015532001 Vitis vinifera HOM05D003537 ORTHO05D004180 4.3e-15 85.1 133 42.9
Dinv15950 Davidia involucrata HOM05D003537 ORTHO05D004180 7.3e-15 84.3 84 70.2
Phvul.003G164500 Phaseolus vulgaris HOM05D003537 ORTHO05D004180 7.3e-15 84.3 95 66.3
SGA_v2.0_scaffold12G06124 Striga asiatica HOM05D003537 ORTHO05D004180 7.3e-15 84.3 93 45.2
TWI34G1168 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 7.3e-15 84.3 120 52.5
Glyma.04G147800 Glycine max HOM05D003537 ORTHO05D004180 9.5e-15 84.0 81 67.9
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 9.5e-15 84.0 89 61.8
TAR636G0369 Trochodendron aralioides HOM05D003537 ORTHO05D004180 9.5e-15 84.0 89 58.4
arahy.Tifrunner.gnm1.ann1.F0XIJD Arachis hypogaea HOM05D003537 ORTHO05D004180 1.2e-14 83.6 90 54.4
ClCG11G003050 Citrullus lanatus HOM05D003537 ORTHO05D004180 1.6e-14 83.2 87 59.8
MD15G1124500 Malus domestica HOM05D003537 ORTHO05D004180 1.6e-14 83.2 80 55.0
Psat0s2233g0360 Pisum sativum HOM05D003537 ORTHO05D004180 1.6e-14 83.2 75 61.3
Thecc.09G126600 Theobroma cacao HOM05D003537 ORTHO05D004180 1.6e-14 83.2 94 45.7
TAR625G0117 Trochodendron aralioides HOM05D003537 ORTHO05D004180 1.6e-14 83.2 89 62.9
VMungo1215G2386 Vigna mungo HOM05D003537 ORTHO05D004180 1.6e-14 83.2 95 64.2
CANSAT11G2285 Cannabis sativa HOM05D003537 ORTHO05D004180 2.1e-14 82.8 93 53.8
Rhsim01G0071100 Rhododendron simsii HOM05D003537 ORTHO05D004180 2.1e-14 82.8 89 66.3
RhsimUnG0194700 Rhododendron simsii HOM05D003537 ORTHO05D004180 2.1e-14 82.8 89 66.3
Cpa.g.sc75.27 Carica papaya HOM05D003537 ORTHO05D004180 2.8e-14 82.4 89 53.9
TWI63G0509 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 2.8e-14 82.4 120 49.2
Nn2g12030 Nelumbo nucifera HOM05D003537 ORTHO05D004180 3.6e-14 82.0 128 48.4
Peaxi162Scf00157g01525 Petunia axillaris HOM05D003537 ORTHO05D004180 3.6e-14 82.0 125 47.2
Atru.BG.3.p Acer truncatum HOM05D003537 ORTHO05D004180 8.0e-14 80.9 68 60.3
Ca_21681_v3 Cicer arietinum L. HOM05D003537 ORTHO05D004180 8.0e-14 80.9 88 52.3
Glyma.17G114800 Glycine max HOM05D003537 ORTHO05D004180 8.0e-14 80.9 124 40.3
Lalb_Chr13g0301861 Lupinus albus HOM05D003537 ORTHO05D004180 8.0e-14 80.9 87 70.1
CsaV3_2G002870 Cucumis sativus L. HOM05D003537 ORTHO05D004180 1.1e-13 80.5 87 47.1
Gohir.A06G143050 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.8e-13 79.7 88 44.3
PGR142G2689 Punica granatum HOM05D003537 ORTHO05D004180 1.8e-13 79.7 89 43.8
AUR62011130 Chenopodium quinoa HOM05D003537 ORTHO05D004180 3.1e-13 79.0 93 60.2
Migut.K00478 Erythranthe guttata HOM05D003537 ORTHO05D004180 3.1e-13 79.0 89 51.7
Sed0005083 Sechium edule HOM05D003537 ORTHO05D004180 3.1e-13 79.0 95 51.6
MBI01_g36269_MAGBIO Magnolia biondii HOM05D003537 ORTHO05D004180 4.0e-13 78.6 109 61.5
Hund09242 Selenicereus undatus HOM05D003537 ORTHO05D004180 4.0e-13 78.6 95 58.9
SGA_v2.0_scaffold17G08031 Striga asiatica HOM05D003537 ORTHO05D004180 4.0e-13 78.6 73 54.8
AUR62013357 Chenopodium quinoa HOM05D003537 ORTHO05D004180 8.9e-13 77.4 92 59.8
Oeu018469.1 Olea europaea HOM05D003537 ORTHO05D004180 8.9e-13 77.4 93 59.1
Aa31LG8G16720 Aethionema arabicum HOM05D003537 ORTHO05D004180 1.2e-12 77.0 89 48.3
Cc08_g00790 Coffea canephora HOM05D003537 ORTHO05D004180 1.2e-12 77.0 123 43.1
DCAR_003091 Daucus carota HOM05D003537 ORTHO05D004180 1.5e-12 76.6 60 70.0
FAN24G0346 Fragaria x ananassa HOM05D003537 ORTHO05D004180 2.0e-12 76.3 97 48.5
Glyma.13G167200 Glycine max HOM05D003537 ORTHO05D004180 2.0e-12 76.3 87 46.0
Oeu007500.1 Olea europaea HOM05D003537 ORTHO05D004180 2.0e-12 76.3 117 58.1
Ciclev10009876m.g Citrus clementina HOM05D003537 ORTHO05D004180 2.6e-12 75.9 92 48.9
BcaB01g00893 Brassica carinata HOM05D003537 ORTHO05D004180 3.4e-12 75.5 92 44.6
Lj4g0026965 Lotus japonicus HOM05D003537 ORTHO05D004180 4.4e-12 75.1 88 51.1
THA.LOC104815279 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 4.4e-12 75.1 96 57.3
CDE06G2093 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 5.8e-12 74.7 94 58.5
MSTRG.21979 Avicennia marina HOM05D003537 ORTHO05D004180 7.5e-12 74.3 93 44.1
Lsat_1_v5_gn_8_58621 Lactuca sativa HOM05D003537 ORTHO05D004180 7.5e-12 74.3 91 40.7
RcHm_v2.0_Chr2g0088401 Rosa chinensis HOM05D003537 ORTHO05D004180 7.5e-12 74.3 94 56.4
unitig_26.g9662 Utricularia gibba HOM05D003537 ORTHO05D004180 7.5e-12 74.3 87 42.5
AL5G26940 Arabidopsis lyrata HOM05D003537 ORTHO05D004180 9.8e-12 73.9 123 35.8
A06p19950 Brassica napus HOM05D003537 ORTHO05D004180 1.3e-11 73.6 92 58.7
BraA06t25078Z Brassica rapa HOM05D003537 ORTHO05D004180 1.3e-11 73.6 92 58.7
FvH4_1g03260 Fragaria vesca HOM05D003537 ORTHO05D004180 1.3e-11 73.6 94 62.8
FAN19G1671 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.3e-11 73.6 94 62.8
FAN28G2448 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.3e-11 73.6 94 62.8
Medtr4g114180 Medicago truncatula HOM05D003537 ORTHO05D004180 1.3e-11 73.6 85 45.9
PSO170G5454 Papaver somniferum HOM05D003537 ORTHO05D004180 1.3e-11 73.6 99 49.5
Psat4g040120 Pisum sativum HOM05D003537 ORTHO05D004180 1.3e-11 73.6 89 56.2
A06p27250 Brassica napus HOM05D003537 ORTHO05D004180 1.7e-11 73.2 96 54.2
Migut.K00479 Erythranthe guttata HOM05D003537 ORTHO05D004180 1.7e-11 73.2 93 43.0
Gohir.D06G099500 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.7e-11 73.2 55 72.7
Hma1.2p1_0018F.1_g012400 Hydrangea macrophylla HOM05D003537 ORTHO05D004180 2.2e-11 72.8 99 39.4
C03p71880 Brassica napus HOM05D003537 ORTHO05D004180 2.9e-11 72.4 92 65.2
Prupe.7G243100 Prunus persica HOM05D003537 ORTHO05D004180 2.9e-11 72.4 94 61.7
ATR1120G202 Amborella trichopoda HOM05D003537 ORTHO05D004180 3.7e-11 72.0 73 53.4
vmacro20557 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 3.7e-11 72.0 89 59.6
BcaC01g01786 Brassica carinata HOM05D003537 ORTHO05D004180 4.9e-11 71.6 92 58.7
BraA06t25666Z Brassica rapa HOM05D003537 ORTHO05D004180 4.9e-11 71.6 100 57.0
Os06g0332800 Oryza sativa ssp. japonica HOM05D003537 ORTHO05D004180 4.9e-11 71.6 91 65.9
Sp5g14270 Schrenkiella parvula HOM05D003537 ORTHO05D004180 4.9e-11 71.6 89 58.4
BcaB02g10692 Brassica carinata HOM05D003537 ORTHO05D004180 6.4e-11 71.2 81 66.7
FAN23G0028 Fragaria x ananassa HOM05D003537 ORTHO05D004180 6.4e-11 71.2 92 47.8
vmacro23102 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 8.3e-11 70.9 72 68.1
CARHR156330 Cardamine hirsuta HOM05D003537 ORTHO05D004180 1.1e-10 70.5 103 53.4
Ah.14g079820 Amaranthus hybridus HOM05D003537 ORTHO05D004180 1.4e-10 70.1 103 42.7
BcaB05g23065 Brassica carinata HOM05D003537 ORTHO05D004180 1.4e-10 70.1 81 67.9
ECA240G1743 Erigeron canadensis HOM05D003537 ORTHO05D004180 1.4e-10 70.1 128 43.8
MD02G1031600 Malus domestica HOM05D003537 ORTHO05D004180 1.4e-10 70.1 94 46.8
PSO455G0045 Papaver somniferum HOM05D003537 ORTHO05D004180 1.4e-10 70.1 96 47.9
AT3G47650 Arabidopsis thaliana HOM05D003537 ORTHO05D004180 1.9e-10 69.7 123 45.5
BcaC09g49812 Brassica carinata HOM05D003537 ORTHO05D004180 1.9e-10 69.7 89 62.9
C01p32690 Brassica napus HOM05D003537 ORTHO05D004180 1.9e-10 69.7 89 62.9
BolC1t03207H Brassica oleracea HOM05D003537 ORTHO05D004180 1.9e-10 69.7 89 60.7
MD15G1173100 Malus domestica HOM05D003537 ORTHO05D004180 1.9e-10 69.7 92 60.9
Mapoly0035s0118 Marchantia polymorpha HOM05D002896 ORTHO05D003263 2.4e-10 69.3 72 55.6
A01p25800 Brassica napus HOM05D003537 ORTHO05D004180 3.2e-10 68.9 111 48.6
BraA01t02496Z Brassica rapa HOM05D003537 ORTHO05D004180 3.2e-10 68.9 111 48.6
Carub.0005s1378 Capsella rubella HOM05D003537 ORTHO05D004180 3.2e-10 68.9 120 53.3
Lsat_1_v5_gn_7_45281 Lactuca sativa HOM05D003537 ORTHO05D004180 3.2e-10 68.9 73 52.1
Pp3c18_21980 Physcomitrium patens HOM05D003537 ORTHO05D004180 3.2e-10 68.9 82 41.5
MELO3C030460.2 Cucumis melo HOM05D003537 ORTHO05D004180 4.1e-10 68.6 56 71.4
CDE04G0424 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 5.4e-10 68.2 94 56.4
TPR.G10724 Trifolium pratense HOM05D003537 ORTHO05D004180 2.0e-09 66.2 70 52.9
SEGI_36836 Sequoiadendron giganteum HOM05D003537 ORTHO05D004180 3.5e-09 65.5 83 50.6
Peaxi162Scf00256g00035 Petunia axillaris HOM05D003537 ORTHO05D004180 6.0e-09 64.7 107 36.4
HanXRQChr09g0242821 Helianthus annuus HOM05D003537 ORTHO05D004180 7.8e-09 64.3 90 61.1
SMO145G0190 Selaginella moellendorffii HOM05D003537 ORTHO05D004180 1.0e-08 63.9 70 44.3
MELO3C004506.2 Cucumis melo HOM05D003537 ORTHO05D004180 2.3e-08 62.8 116 41.4
Aqoxy7G02181 Aquilegia oxysepala HOM05D003537 ORTHO05D004180 3.0e-08 62.4 89 56.2
Duzib168G0240 Durio zibethinus HOM05D003537 ORTHO05D004180 3.3e-07 58.9 73 41.1
Thhalv10010812m.g Eutrema salsugineum HOM05D003537 ORTHO05D004180 9.5e-07 57.4 89 50.6
Lsat_1_v5_gn_5_30800 Lactuca sativa HOM05D003537 ORTHO05D004180 9.5e-07 57.4 59 47.5
SalBow1G5494 Salvia bowleyana HOM05D003537 ORTHO05D004180 9.5e-07 57.4 66 47.0
GSVIVG01015534001 Vitis vinifera HOM05D003537 ORTHO05D004180 1.6e-06 56.6 71 42.3
FAN26G0344 Fragaria x ananassa HOM05D003537 ORTHO05D004180 2.1e-06 56.2 53 60.4
BcaC01g02287 Brassica carinata HOM05D003537 ORTHO05D004180 3.6e-06 55.5 101 34.7


User provided reference genes

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