Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0093 Punica granatum HOM05D002652 ORTHO05D002739 1.7e-70 269.2 138 100.0
PGR044G1935 Punica granatum HOM05D002652 ORTHO05D002739 4.2e-69 264.6 138 97.1
GSVIVG01027929001 Vitis vinifera HOM05D002652 ORTHO05D002739 3.2e-16 89.0 85 51.8
RhsimUnG0058100 Rhododendron simsii HOM05D002652 ORTHO05D002739 9.2e-16 87.4 118 37.3
COL.COLO4_15901 Corchorus olitorius HOM05D002652 ORTHO05D002739 1.7e-14 83.2 83 45.8
HanXRQChr07g0194071 Helianthus annuus HOM05D002652 ORTHO05D002739 1.7e-14 83.2 85 50.6
Oeu059391.1 Olea europaea HOM05D002652 ORTHO05D002739 3.9e-14 82.0 83 51.8
Rhsim02G0046900 Rhododendron simsii HOM05D002652 ORTHO05D002739 5.0e-14 81.6 118 35.6
COL.COLO4_15898 Corchorus olitorius HOM05D002652 ORTHO05D002739 6.6e-14 81.3 85 47.1
FvH4_4g04980 Fragaria vesca HOM05D002652 ORTHO05D002739 8.6e-14 80.9 85 48.2
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 8.6e-14 80.9 85 48.2
Oeu020135.1 Olea europaea HOM05D002652 ORTHO05D002739 8.6e-14 80.9 88 52.3
Hma1.2p1_0042F.1_g025730 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 1.5e-13 80.1 85 50.6
MSTRG.4179 Avicennia marina HOM05D002652 ORTHO05D002739 2.5e-13 79.3 83 50.6
Oeu061866.1 Olea europaea HOM05D002652 ORTHO05D002739 2.5e-13 79.3 88 51.1
FvH4_3g15020 Fragaria vesca HOM05D002652 ORTHO05D002739 1.2e-12 77.0 85 48.2
COL.COLO4_15909 Corchorus olitorius HOM05D002652 ORTHO05D002739 1.6e-12 76.6 83 44.6
SalBow2G0549 Salvia bowleyana HOM05D002652 ORTHO05D002739 1.6e-12 76.6 85 43.5
RcHm_v2.0_Chr4g0395751 Rosa chinensis HOM05D002652 ORTHO05D002739 2.1e-12 76.3 85 43.5
Aa31LG9G4210 Aethionema arabicum HOM05D002652 ORTHO05D002739 2.8e-12 75.9 87 49.4
Nn1g09048 Nelumbo nucifera HOM05D002652 ORTHO05D002739 4.7e-12 75.1 83 44.6
Potri.019G026820 Populus trichocarpa HOM05D002652 ORTHO05D002739 4.7e-12 75.1 85 42.4
COL.COLO4_15902 Corchorus olitorius HOM05D002652 ORTHO05D002739 6.2e-12 74.7 83 43.4
Actinidia39935 Actinidia chinensis HOM05D002652 ORTHO05D002739 1.1e-11 73.9 85 49.4
THA.LOC104821630 Tarenaya hassleriana HOM05D002652 ORTHO05D002739 1.1e-11 73.9 83 48.2
Lsat_1_v5_gn_2_104120 Lactuca sativa HOM05D002652 ORTHO05D002739 1.4e-11 73.6 83 45.8
Prupe.1G050100 Prunus persica HOM05D002652 ORTHO05D002739 1.4e-11 73.6 83 47.0
SalBow3G3644 Salvia bowleyana HOM05D002652 ORTHO05D002739 1.4e-11 73.6 85 45.9
Ciclev10006564m.g Citrus clementina HOM05D002652 ORTHO05D002739 2.3e-11 72.8 85 44.7
COL.COLO4_15908 Corchorus olitorius HOM05D002652 ORTHO05D002739 2.3e-11 72.8 80 42.5
Rhsim02G0047000 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.3e-11 72.8 89 41.6
Ciclev10005927m.g Citrus clementina HOM05D002652 ORTHO05D002739 3.1e-11 72.4 119 37.0
CARHR219080 Cardamine hirsuta HOM05D002652 ORTHO05D002739 4.0e-11 72.0 84 48.8
FAN12G4037 Fragaria x ananassa HOM05D002652 ORTHO05D002739 4.0e-11 72.0 91 42.9
Nn1g00657 Nelumbo nucifera HOM05D002652 ORTHO05D002739 4.0e-11 72.0 87 46.0
Actinidia39934 Actinidia chinensis HOM05D002652 ORTHO05D002739 5.2e-11 71.6 85 41.2
Carub.0007s2911 Capsella rubella HOM05D002652 ORTHO05D002739 6.8e-11 71.2 84 45.2
Cfa014794 Carpinus fangiana HOM05D002652 ORTHO05D002739 6.8e-11 71.2 91 44.0
DCAR_002582 Daucus carota HOM05D002652 ORTHO05D002739 6.8e-11 71.2 86 46.5
Potri.019G027440 Populus trichocarpa HOM05D002652 ORTHO05D002739 6.8e-11 71.2 87 42.5
TAR636G2313 Trochodendron aralioides HOM05D002652 ORTHO05D002739 6.8e-11 71.2 85 45.9
TAR174G0001 Trochodendron aralioides HOM05D002652 ORTHO05D002739 8.9e-11 70.9 103 39.8
COL.COLO4_15907 Corchorus olitorius HOM05D002652 ORTHO05D002739 1.2e-10 70.5 83 41.0
ECA247G3161 Erigeron canadensis HOM05D002652 ORTHO05D002739 1.2e-10 70.5 83 41.0
Eucgr.G01601 Eucalyptus grandis HOM05D002652 ORTHO05D002739 1.2e-10 70.5 83 42.2
FAN17G3082 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.2e-10 70.5 86 39.5
Hma1.2p1_0385F.1_g141620 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 1.2e-10 70.5 85 45.9
Potri.019G026900 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.2e-10 70.5 85 42.4
Potri.019G027100 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.2e-10 70.5 85 42.4
RhsimUnG0058300 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.2e-10 70.5 118 32.2
RcHm_v2.0_Chr5g0024661 Rosa chinensis HOM05D002652 ORTHO05D002739 1.2e-10 70.5 85 48.2
Potri.019G026780 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.5e-10 70.1 87 41.4
Potri.019G028800 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.5e-10 70.1 83 43.4
QL08p018841 Quercus lobata HOM05D002652 ORTHO05D002739 1.5e-10 70.1 85 42.4
Potri.019G027200 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.0e-10 69.7 85 41.2
Prupe.1G050000 Prunus persica HOM05D002652 ORTHO05D002739 2.0e-10 69.7 86 41.9
QL06p021327 Quercus lobata HOM05D002652 ORTHO05D002739 2.0e-10 69.7 85 42.4
Sabra19G0035100 Salix brachista HOM05D002652 ORTHO05D002739 2.0e-10 69.7 85 41.2
Sabra19G0035500 Salix brachista HOM05D002652 ORTHO05D002739 2.0e-10 69.7 85 41.2
Sabra19G0038500 Salix brachista HOM05D002652 ORTHO05D002739 2.0e-10 69.7 83 42.2
TAR365G0384 Trochodendron aralioides HOM05D002652 ORTHO05D002739 2.0e-10 69.7 101 40.6
Aa31LG9G4240 Aethionema arabicum HOM05D002652 ORTHO05D002739 2.6e-10 69.3 84 46.4
CiPaw.02G106000 Carya illinoinensis HOM05D002652 ORTHO05D002739 2.6e-10 69.3 83 47.0
Nn1g00658 Nelumbo nucifera HOM05D002652 ORTHO05D002739 2.6e-10 69.3 88 42.0
TAR636G1048 Trochodendron aralioides HOM05D002652 ORTHO05D002739 2.6e-10 69.3 85 48.2
Aqoxy7G00431 Aquilegia oxysepala HOM05D002652 ORTHO05D002739 3.4e-10 68.9 83 42.2
Dinv29797 Davidia involucrata HOM05D002652 ORTHO05D002739 3.4e-10 68.9 84 45.2
Nn1g00655 Nelumbo nucifera HOM05D002652 ORTHO05D002739 3.4e-10 68.9 88 42.0
Potri.019G026860 Populus trichocarpa HOM05D002652 ORTHO05D002739 3.4e-10 68.9 85 40.0
Sabra19G0035700 Salix brachista HOM05D002652 ORTHO05D002739 3.4e-10 68.9 85 41.2
Aa31LG9G4200 Aethionema arabicum HOM05D002652 ORTHO05D002739 4.4e-10 68.6 84 44.0
MD05G1228500 Malus domestica HOM05D002652 ORTHO05D002739 4.4e-10 68.6 85 45.9
QL06p021274 Quercus lobata HOM05D002652 ORTHO05D002739 4.4e-10 68.6 85 47.1
Nn1g00660 Nelumbo nucifera HOM05D002652 ORTHO05D002739 5.8e-10 68.2 86 38.4
FvH4_4g04990 Fragaria vesca HOM05D002652 ORTHO05D002739 7.5e-10 67.8 85 41.2
FAN25G0267 Fragaria x ananassa HOM05D002652 ORTHO05D002739 7.5e-10 67.8 85 45.9
Rhsim02G0047400 Rhododendron simsii HOM05D002652 ORTHO05D002739 7.5e-10 67.8 85 43.5
RcHm_v2.0_Chr4g0395571 Rosa chinensis HOM05D002652 ORTHO05D002739 7.5e-10 67.8 91 40.7
Sabra19G0038800 Salix brachista HOM05D002652 ORTHO05D002739 7.5e-10 67.8 83 41.0
Migut.N00887 Erythranthe guttata HOM05D002652 ORTHO05D002739 9.8e-10 67.4 83 41.0
Prupe.6G152600 Prunus persica HOM05D002652 ORTHO05D002739 9.8e-10 67.4 80 45.0
Rhsim02G0045100 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.3e-09 67.0 85 42.4
RhsimUnG0195300 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.3e-09 67.0 85 41.2
Sabra19G0038700 Salix brachista HOM05D002652 ORTHO05D002739 1.7e-09 66.6 83 39.8
Haze_11472 Corylus avellana HOM05D002652 ORTHO05D002739 2.2e-09 66.2 85 43.5
Haze_25448 Corylus avellana HOM05D002652 ORTHO05D002739 2.2e-09 66.2 85 41.2
DCAR_002581 Daucus carota HOM05D002652 ORTHO05D002739 2.2e-09 66.2 85 43.5
Potri.019G029000 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.2e-09 66.2 85 41.2
Rhsim02G0044400 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.2e-09 66.2 78 39.7
Rhsim02G0046500 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.2e-09 66.2 78 39.7
RcHm_v2.0_Chr4g0395801 Rosa chinensis HOM05D002652 ORTHO05D002739 2.2e-09 66.2 85 41.2
Sabra19G0038900 Salix brachista HOM05D002652 ORTHO05D002739 2.2e-09 66.2 85 37.6
Sabra19G0039000 Salix brachista HOM05D002652 ORTHO05D002739 2.2e-09 66.2 85 40.0
Actinidia11376 Actinidia chinensis HOM05D002652 ORTHO05D002739 2.9e-09 65.9 83 39.8
Aa31LG7G1800 Aethionema arabicum HOM05D002652 ORTHO05D002739 2.9e-09 65.9 84 45.2
ECA238G3361 Erigeron canadensis HOM05D000095 ORTHO05D002739 2.9e-09 65.9 83 44.6
Ciclev10007025m.g Citrus clementina HOM05D002652 ORTHO05D002739 3.7e-09 65.5 85 42.4
TAR636G3443 Trochodendron aralioides HOM05D002652 ORTHO05D002739 3.7e-09 65.5 85 45.9
Aa31LG7G1750 Aethionema arabicum HOM05D002652 ORTHO05D002739 4.9e-09 65.1 84 45.2
Aa31LG9G4330 Aethionema arabicum HOM05D002652 ORTHO05D002739 4.9e-09 65.1 84 44.0
FAN22G0933 Fragaria x ananassa HOM05D004511 ORTHO05D005348 4.9e-09 65.1 85 41.2
Sabra19G0038300 Salix brachista HOM05D002652 ORTHO05D002739 4.9e-09 65.1 83 39.8
A09p20860 Brassica napus HOM05D002652 ORTHO05D002739 6.4e-09 64.7 83 44.6
BraA09t37688Z Brassica rapa HOM05D002652 ORTHO05D002739 6.4e-09 64.7 83 44.6
Cpa.g.sc59.9 Carica papaya HOM05D002652 ORTHO05D002739 6.4e-09 64.7 83 41.0
BcaC04g21865 Brassica carinata HOM05D002652 ORTHO05D002739 8.3e-09 64.3 84 44.0
C09p26400 Brassica napus HOM05D002652 ORTHO05D002739 8.3e-09 64.3 84 44.0
BolC9t55542H Brassica oleracea HOM05D002652 ORTHO05D002739 8.3e-09 64.3 84 44.0
CSS0002481 Camellia sinensis var. sinensis HOM05D002652 ORTHO05D002739 8.3e-09 64.3 66 48.5
Migut.N00305 Erythranthe guttata HOM05D002652 ORTHO05D002739 8.3e-09 64.3 83 41.0
Migut.N00315 Erythranthe guttata HOM05D002652 ORTHO05D002739 8.3e-09 64.3 83 45.8
Nn5g27876 Nelumbo nucifera HOM05D002652 ORTHO05D002739 8.3e-09 64.3 87 40.2
Atru.chr4.1903 Acer truncatum HOM05D002652 ORTHO05D002739 1.1e-08 63.9 83 45.8
BcaB07g30971 Brassica carinata HOM05D002652 ORTHO05D002739 1.1e-08 63.9 84 44.0
DCAR_030374 Daucus carota HOM05D002652 ORTHO05D002739 1.1e-08 63.9 87 41.4
Migut.N00889 Erythranthe guttata HOM05D002652 ORTHO05D002739 1.1e-08 63.9 89 42.7
Duzib151G0998 Durio zibethinus HOM05D002652 ORTHO05D002739 1.4e-08 63.5 85 41.2
Oeu011206.1 Olea europaea HOM05D002652 ORTHO05D002739 1.4e-08 63.5 82 37.8
Potri.010G191400 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.9e-08 63.2 85 40.0
RcHm_v2.0_Chr4g0395741 Rosa chinensis HOM05D002652 ORTHO05D002739 1.9e-08 63.2 85 40.0
Sabra11G0121600 Salix brachista HOM05D002652 ORTHO05D002739 1.9e-08 63.2 85 40.0
Rhsim02G0046000 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.4e-08 62.8 85 38.8
RhsimUnG0101000 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.4e-08 62.8 85 42.4
Sabra19G0038400 Salix brachista HOM05D002652 ORTHO05D002739 2.4e-08 62.8 85 36.5
Aa31LG7G1790 Aethionema arabicum HOM05D002652 ORTHO05D002739 3.2e-08 62.4 84 42.9
Duzib151G0943 Durio zibethinus HOM05D002652 ORTHO05D002739 3.2e-08 62.4 85 40.0
Prupe.7G106800 Prunus persica HOM05D002652 ORTHO05D002739 3.2e-08 62.4 85 38.8
Nn1g00661 Nelumbo nucifera HOM05D002652 ORTHO05D002739 4.1e-08 62.0 86 39.5
MSTRG.4180 Avicennia marina HOM05D002652 ORTHO05D002739 5.4e-08 61.6 105 32.4
Eucgr.H02910 Eucalyptus grandis HOM05D043694 ORTHO05D002739 5.4e-08 61.6 86 34.9
Sabra19G0035200 Salix brachista HOM05D002652 ORTHO05D002739 5.4e-08 61.6 83 38.6
Sabra19G0035400 Salix brachista HOM05D002652 ORTHO05D002739 5.4e-08 61.6 83 38.6
TAR636G0198 Trochodendron aralioides HOM05D002652 ORTHO05D002739 5.4e-08 61.6 51 56.9
FAN12G2993 Fragaria x ananassa HOM05D002652 ORTHO05D002739 9.2e-08 60.8 87 39.1
Rhsim02G0044300 Rhododendron simsii HOM05D002652 ORTHO05D002739 9.2e-08 60.8 78 37.2
Rhsim02G0044800 Rhododendron simsii HOM05D002652 ORTHO05D002739 9.2e-08 60.8 85 42.4
Haze_11422 Corylus avellana HOM05D001324 ORTHO05D001220 1.2e-07 60.5 85 40.0
Migut.N00884 Erythranthe guttata HOM05D002652 ORTHO05D002739 1.2e-07 60.5 105 33.3
FvH4_4g04740 Fragaria vesca HOM05D002652 ORTHO05D002739 1.2e-07 60.5 82 40.2
vmacro15484 Vaccinium macrocarpon HOM05D002652 ORTHO05D002739 1.2e-07 60.5 85 37.6
FAN10G1323 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.6e-07 60.1 83 38.6
FAN10G2095 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.6e-07 60.1 83 38.6
RcHm_v2.0_Chr4g0397571 Rosa chinensis HOM05D002652 ORTHO05D002739 1.6e-07 60.1 83 41.0
vmacro15483 Vaccinium macrocarpon HOM05D002652 ORTHO05D002739 1.6e-07 60.1 86 34.9
MSTRG.4181 Avicennia marina HOM05D002652 ORTHO05D002739 2.1e-07 59.7 83 37.3
CSS0031417 Camellia sinensis var. sinensis HOM05D002652 ORTHO05D002739 2.1e-07 59.7 85 42.4
Rhsim09G0015400 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.1e-07 59.7 85 41.2
TAR636G0960 Trochodendron aralioides HOM05D002652 ORTHO05D002739 2.1e-07 59.7 59 52.5
Potri.019G029100 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.7e-07 59.3 85 35.3
Rhsim02G0046300 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.7e-07 59.3 78 39.7
Aa31LG7G1660 Aethionema arabicum HOM05D002652 ORTHO05D002739 3.5e-07 58.9 83 39.8
Aa31LG7G1670 Aethionema arabicum HOM05D002652 ORTHO05D002739 3.5e-07 58.9 83 39.8
Cpa.g.sc8968.1 Carica papaya HOM05D002652 ORTHO05D002739 3.5e-07 58.9 80 38.8
Hma1.2p1_0565F.1_g179480 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 3.5e-07 58.9 85 41.2
AL9U10120 Arabidopsis lyrata HOM05D002652 ORTHO05D002739 4.6e-07 58.5 84 41.7
Duzib151G0030 Durio zibethinus HOM05D002652 ORTHO05D002739 6.0e-07 58.2 85 37.6
Potri.019G026740 Populus trichocarpa HOM05D002652 ORTHO05D002739 7.8e-07 57.8 85 36.5
Rhsim02G0046100 Rhododendron simsii HOM05D002652 ORTHO05D002739 7.8e-07 57.8 85 41.2
AT4G13440 Arabidopsis thaliana HOM05D002652 ORTHO05D002739 1.0e-06 57.4 84 40.5
DCAR_030375 Daucus carota HOM05D002652 ORTHO05D002739 1.3e-06 57.0 85 36.5
Migut.G00567 Erythranthe guttata HOM05D002652 ORTHO05D002739 1.7e-06 56.6 86 37.2
COL.COLO4_15900 Corchorus olitorius HOM05D002652 ORTHO05D002739 2.3e-06 56.2 85 35.3
DCAR_030377 Daucus carota HOM05D002652 ORTHO05D002739 2.3e-06 56.2 85 36.5
CiPaw.08G106600 Carya illinoinensis HOM05D002652 ORTHO05D002739 3.0e-06 55.8 84 35.7
Migut.N00313 Erythranthe guttata HOM05D002652 ORTHO05D002739 3.0e-06 55.8 83 42.2
SalBow2G1631 Salvia bowleyana HOM05D002652 ORTHO05D002739 3.0e-06 55.8 85 36.5
Actinidia11377 Actinidia chinensis HOM05D002652 ORTHO05D002739 3.9e-06 55.5 118 31.4
DCAR_030376 Daucus carota HOM05D002652 ORTHO05D002739 3.9e-06 55.5 85 37.6
Migut.N00883 Erythranthe guttata HOM05D002652 ORTHO05D002739 3.9e-06 55.5 89 33.7
Potri.T121000 Populus trichocarpa HOM05D002652 ORTHO05D002739 3.9e-06 55.5 85 31.8
TAR636G2060 Trochodendron aralioides HOM05D002652 ORTHO05D002739 3.9e-06 55.5 85 40.0
MSTRG.4182 Avicennia marina HOM05D002652 ORTHO05D002739 8.6e-06 54.3 83 34.9


User provided reference genes

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