Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 5.0e-64 247.7 130 100.0
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 9.8e-52 206.8 130 82.3
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 4.9e-51 204.5 130 82.3
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 5.4e-50 201.1 128 82.0
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 5.4e-50 201.1 130 81.5
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 7.0e-50 200.7 128 82.0
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 7.0e-50 200.7 130 82.3
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 9.2e-50 200.3 128 82.0
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 9.2e-50 200.3 128 82.0
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 1.2e-49 199.9 128 81.2
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 1.2e-49 199.9 128 82.0
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 1.6e-49 199.5 130 80.8
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.0e-49 199.1 128 82.0
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 2.7e-49 198.7 130 80.8
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 2.7e-49 198.7 127 81.1
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 2.7e-49 198.7 130 80.0
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 3.5e-49 198.4 128 81.2
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 3.5e-49 198.4 128 81.2
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 3.5e-49 198.4 130 80.0
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 4.5e-49 198.0 130 78.5
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 5.9e-49 197.6 130 79.2
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 5.9e-49 197.6 128 79.7
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 5.9e-49 197.6 130 81.5
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 7.8e-49 197.2 128 79.7
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 7.8e-49 197.2 128 79.7
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.0e-48 196.8 130 78.5
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.0e-48 196.8 130 78.5
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 1.3e-48 196.4 128 79.7
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.3e-48 196.4 128 78.9
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 1.3e-48 196.4 126 81.0
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 1.3e-48 196.4 126 81.0
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 1.3e-48 196.4 128 80.5
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 1.7e-48 196.1 128 79.7
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 1.7e-48 196.1 130 77.7
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 2.9e-48 195.3 130 79.2
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 2.9e-48 195.3 130 78.5
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 3.9e-48 194.9 128 80.5
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 6.6e-48 194.1 130 78.5
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 6.6e-48 194.1 130 79.2
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 8.6e-48 193.7 128 78.1
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 8.6e-48 193.7 130 78.5
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 8.6e-48 193.7 128 79.7
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 1.9e-47 192.6 130 75.4
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 1.9e-47 192.6 130 77.7
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 1.9e-47 192.6 130 79.2
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 2.5e-47 192.2 130 77.7
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 3.3e-47 191.8 130 75.4
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 4.3e-47 191.4 134 77.6
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 9.5e-47 190.3 128 77.3
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 1.2e-46 189.9 130 76.9
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 1.2e-46 189.9 130 76.2
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 1.2e-46 189.9 130 76.2
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 1.6e-46 189.5 130 76.2
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 2.8e-46 188.7 128 77.3
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 3.6e-46 188.3 122 78.7
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 3.6e-46 188.3 126 78.6
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 4.7e-46 188.0 128 75.0
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 6.1e-46 187.6 130 75.4
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 6.1e-46 187.6 130 76.2
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 6.1e-46 187.6 128 76.6
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 8.0e-46 187.2 128 77.3
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 8.0e-46 187.2 130 75.4
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 8.0e-46 187.2 130 79.2
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.4e-45 186.4 128 75.0
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 4.0e-45 184.9 130 73.8
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 5.2e-45 184.5 130 73.8
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 1.5e-44 183.0 130 73.1
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 2.0e-44 182.6 128 73.4
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 2.6e-44 182.2 123 77.2
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 5.8e-44 181.0 125 73.6
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 7.5e-44 180.6 132 74.2
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 1.7e-43 179.5 128 71.9
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 1.7e-43 179.5 127 72.4
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 2.2e-43 179.1 128 75.0
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 2.9e-43 178.7 118 79.7
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 3.7e-43 178.3 127 70.1
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 4.9e-43 177.9 130 71.5
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 1.1e-42 176.8 128 75.0
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 1.4e-42 176.4 112 82.1
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 1.4e-42 176.4 128 70.3
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 3.2e-42 175.3 120 75.0
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 9.2e-42 173.7 126 69.8
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 1.6e-41 172.9 122 77.0
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 2.0e-41 172.6 130 70.0
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 3.5e-41 171.8 171 57.3
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 3.5e-41 171.8 127 70.1
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 7.8e-41 170.6 131 74.8
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 1.9e-39 166.0 136 65.4
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 3.3e-39 165.2 123 71.5
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 7.3e-39 164.1 125 72.0
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 2.1e-38 162.5 128 69.5
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 3.6e-38 161.8 128 68.8
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 3.6e-38 161.8 128 68.8
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 7.5e-36 154.1 103 78.6
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 9.8e-36 153.7 185 51.4
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 3.7e-35 151.8 128 60.9
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 4.9e-35 151.4 98 76.5
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 6.4e-35 151.0 128 60.9
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.4e-34 149.8 98 78.6
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 4.1e-34 148.3 103 72.8
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 7.0e-34 147.5 96 79.2
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 2.7e-33 145.6 116 68.1
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 4.6e-33 144.8 101 78.2
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 2.1e-30 136.0 92 76.1
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 3.4e-28 128.6 92 72.8
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 4.9e-27 124.8 120 55.0
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 3.5e-25 118.6 92 70.7
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 4.6e-25 118.2 94 68.1
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 2.3e-24 115.9 93 68.8
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 5.1e-24 114.8 72 80.6
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 1.6e-22 109.8 99 50.5
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 5.2e-21 104.8 66 78.8
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 6.8e-21 104.4 108 61.1
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 3.8e-19 98.6 62 79.0
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 6.4e-19 97.8 63 74.6
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 2.4e-18 95.9 62 79.0
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 2.1e-17 92.8 62 74.2
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 3.9e-16 88.6 64 70.3
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 1.5e-15 86.7 62 71.0
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 3.3e-15 85.5 64 68.8
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 4.3e-15 85.1 57 82.5
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 5.8e-12 74.7 117 35.9
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 5.4e-10 68.2 115 35.7
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 2.3e-08 62.8 61 49.2
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 1.5e-07 60.1 56 66.1
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 2.1e-06 56.2 38 73.7


User provided reference genes

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