Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0001 Punica granatum HOM05D007669 ORTHO05D009624 0.0e+00 1577.8 797 100.0
Cfa013482 Carpinus fangiana HOM05D007669 ORTHO05D009624 8.8e-220 767.7 782 51.9
Dinv25484 Davidia involucrata HOM05D007669 ORTHO05D009624 3.8e-207 725.7 771 50.8
Ciclev10007518m.g Citrus clementina HOM05D007669 ORTHO05D009624 1.2e-200 704.1 764 49.6
GSVIVG01029262001 Vitis vinifera HOM05D007669 ORTHO05D009624 1.4e-196 690.6 768 49.7
QL11p009976 Quercus lobata HOM05D007669 ORTHO05D009624 4.4e-195 685.6 904 44.5
Potri.018G133300 Populus trichocarpa HOM05D007669 ORTHO05D009624 6.4e-194 681.8 754 49.6
Sabra18G0113000 Salix brachista HOM05D007669 ORTHO05D009624 4.0e-188 662.5 755 48.2
Manes.14G174400 Manihot esculenta HOM05D007669 ORTHO05D009624 2.4e-185 653.3 770 46.1
Lj4g0015120 Lotus japonicus HOM05D007669 ORTHO05D009624 3.2e-185 652.9 785 45.6
MD13G1236300 Malus domestica HOM05D007669 ORTHO05D009624 1.3e-183 647.5 770 45.8
RcHm_v2.0_Chr4g0398451 Rosa chinensis HOM05D007669 ORTHO05D009624 3.0e-183 646.4 785 45.4
TWI34G1867 Tripterygium wilfordii HOM05D007669 ORTHO05D009624 3.9e-183 646.0 777 45.4
CANSAT11G2077 Cannabis sativa HOM05D007669 ORTHO05D009624 1.1e-182 644.4 761 47.8
arahy.Tifrunner.gnm1.ann1.YI9GDS Arachis hypogaea HOM05D007669 ORTHO05D009624 9.9e-179 631.3 765 45.0
TPR.G5403 Trifolium pratense HOM05D007669 ORTHO05D009624 9.9e-179 631.3 776 44.8
Gohir.D05G246300 Gossypium hirsutum HOM05D007669 ORTHO05D009624 1.3e-178 630.9 747 45.9
arahy.Tifrunner.gnm1.ann1.BQQL35 Arachis hypogaea HOM05D007669 ORTHO05D009624 2.2e-178 630.2 772 44.4
Gorai.009G262500 Gossypium raimondii HOM05D007669 ORTHO05D009624 2.2e-178 630.2 742 45.7
FAN17G0559 Fragaria x ananassa HOM05D007669 ORTHO05D009624 3.7e-178 629.4 774 44.7
Medtr4g126780 Medicago truncatula HOM05D007669 ORTHO05D009624 5.4e-177 625.5 742 46.2
FAN07G2841 Fragaria x ananassa HOM05D007669 ORTHO05D009624 1.2e-176 624.4 774 44.1
Oeu025206.1 Olea europaea HOM05D007669 ORTHO05D009624 3.5e-176 622.9 701 47.2
Phvul.003G138500 Phaseolus vulgaris HOM05D007669 ORTHO05D009624 4.6e-176 622.5 767 44.6
Lalb_Chr07g0180781 Lupinus albus HOM05D007669 ORTHO05D009624 1.3e-175 620.9 775 44.4
Gohir.A05G248100 Gossypium hirsutum HOM05D007669 ORTHO05D009624 5.1e-175 619.0 742 45.4
Duzib177G0349 Durio zibethinus HOM05D007669 ORTHO05D009624 1.4e-172 610.9 763 45.7
Rhsim01G0007900 Rhododendron simsii HOM05D007669 ORTHO05D009624 3.1e-172 609.8 814 44.7
HanXRQChr09g0244441 Helianthus annuus HOM05D007669 ORTHO05D009624 1.5e-171 607.4 763 44.4
Cc06_g12900 Coffea canephora HOM05D007669 ORTHO05D009624 1.7e-170 604.0 771 44.2
Ca_21270_v3 Cicer arietinum L. HOM05D007669 ORTHO05D009624 2.2e-170 603.6 836 40.8
ClCG06G013870 Citrullus lanatus HOM05D007669 ORTHO05D009624 1.9e-169 600.5 758 44.2
Migut.K00227 Erythranthe guttata HOM05D007669 ORTHO05D009624 1.3e-167 594.3 766 44.6
Nn8g40420 Nelumbo nucifera HOM05D007669 ORTHO05D009624 3.3e-166 589.7 778 43.3
Cpa.g.sc115.51 Carica papaya HOM05D007669 ORTHO05D009624 2.4e-164 583.6 734 45.6
Prupe.1G068100 Prunus persica HOM05D007669 ORTHO05D009624 2.4e-164 583.6 596 49.8
Eucgr.D01099 Eucalyptus grandis HOM05D007669 ORTHO05D009624 5.8e-163 578.9 519 57.2
PSO170G1866 Papaver somniferum HOM05D007669 ORTHO05D009624 2.2e-162 577.0 786 42.6
PSO063G2993 Papaver somniferum HOM05D007669 ORTHO05D009624 8.4e-162 575.1 789 42.6
Sed0018351 Sechium edule HOM05D007669 ORTHO05D009624 7.1e-161 572.0 757 42.9
FAN22G2123 Fragaria x ananassa HOM05D007669 ORTHO05D009624 2.1e-157 560.5 610 47.2
Ah.09g232160 Amaranthus hybridus HOM05D007669 ORTHO05D009624 4.8e-157 559.3 764 41.5
SalBow1G4073 Salvia bowleyana HOM05D007669 ORTHO05D009624 2.4e-156 557.0 777 43.4
Lj2g0020468 Lotus japonicus HOM05D007669 ORTHO05D009624 2.0e-155 553.9 784 41.3
Lsat_1_v5_gn_7_54021 Lactuca sativa HOM05D007669 ORTHO05D009624 4.9e-154 549.3 775 41.3
Hund06703 Selenicereus undatus HOM05D007669 ORTHO05D009624 2.4e-153 547.0 813 40.2
CiPaw.08G030700 Carya illinoinensis HOM05D007669 ORTHO05D009624 4.6e-152 542.7 566 53.2
AUR62031310 Chenopodium quinoa HOM05D007669 ORTHO05D009624 3.3e-150 536.6 770 41.4
EL10Ac8g19326 Beta vulgaris HOM05D007669 ORTHO05D009624 5.6e-150 535.8 769 42.0
Aqoxy7G02932 Aquilegia oxysepala HOM05D007669 ORTHO05D009624 1.8e-148 530.8 780 41.5
SGA_v2.0_scaffold17G07944 Striga asiatica HOM05D007669 ORTHO05D009624 1.2e-147 528.1 769 41.0
FvH4_4g06530 Fragaria vesca HOM05D007669 ORTHO05D009624 2.5e-145 520.4 552 48.7
Eucgr.D01111 Eucalyptus grandis HOM05D007669 ORTHO05D009624 1.6e-141 507.7 781 42.0
MELO3C017409.2 Cucumis melo HOM05D007669 ORTHO05D009624 8.2e-141 505.4 724 42.5
VMungo1215G2771 Vigna mungo HOM05D007669 ORTHO05D009624 1.8e-140 504.2 929 34.9
Sc13g0008100 Simmondsia chinensis HOM05D007669 ORTHO05D009624 1.2e-139 501.5 769 39.1
vmacro13101 Vaccinium macrocarpon HOM05D007669 ORTHO05D009624 2.7e-136 490.3 752 40.7
ECA240G0205 Erigeron canadensis HOM05D007669 ORTHO05D009624 3.9e-135 486.5 675 41.9
ATR0580G240 Amborella trichopoda HOM05D007669 ORTHO05D009624 3.7e-133 479.9 763 38.1
Glyma.17G056500 Glycine max HOM05D007669 ORTHO05D009624 9.0e-132 475.3 570 46.0
Zm00001eb432590 Zea mays HOM05D007669 ORTHO05D009624 9.7e-126 455.3 794 37.8
Psat4g013920 Pisum sativum HOM05D007669 ORTHO05D009624 3.2e-121 440.3 562 45.0
Hma1.2p1_0726F.1_g208990 Hydrangea macrophylla HOM05D007669 ORTHO05D009624 1.4e-116 424.9 542 46.9
Eucgr.L01386 Eucalyptus grandis HOM05D007669 ORTHO05D009624 1.2e-115 421.8 399 55.9
MBI16_g09333_MAGBIO Magnolia biondii HOM05D007669 ORTHO05D009624 4.8e-109 399.8 535 43.0
HPP92_010780 Vanilla planifolia HOM05D007669 ORTHO05D009624 1.6e-107 394.8 502 43.0
AUR62027394 Chenopodium quinoa HOM05D007669 ORTHO05D009624 9.1e-100 369.0 452 44.9
Glyma.13G102601 Glycine max HOM05D007669 ORTHO05D009624 9.2e-92 342.4 453 42.2
CsaV3_1G032070 Cucumis sativus L. HOM05D007669 ORTHO05D009624 3.8e-90 337.0 383 46.0
DCAR_017992 Daucus carota HOM05D007669 ORTHO05D009624 1.4e-87 328.6 535 38.9
SEGI_13081 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 3.2e-84 317.4 593 34.1
AagrBONN_evm.TU.Sc2ySwM_117.3295 Anthoceros agrestis HOM05D007669 ORTHO05D009624 3.5e-75 287.3 770 30.1
CDE02G1706 Ceratophyllum demersum HOM05D007669 ORTHO05D009624 3.9e-74 283.9 451 38.1
SEGI_05703 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 1.1e-63 249.2 376 39.1
Pp3c9_5530 Physcomitrium patens HOM05D007669 ORTHO05D009624 3.4e-62 244.2 789 27.5
FAN12G2799 Fragaria x ananassa HOM05D007669 ORTHO05D009624 2.2e-61 241.5 254 48.0
SMO356G0293 Selaginella moellendorffii HOM05D007669 ORTHO05D009624 7.8e-59 233.0 409 37.7
Mapoly0147s0035 Marchantia polymorpha HOM05D007669 ORTHO05D009624 6.6e-58 229.9 883 24.2
Eucgr.D01101 Eucalyptus grandis HOM05D007669 ORTHO05D009624 3.4e-54 217.6 196 56.1
Haze_22064 Corylus avellana HOM05D007669 ORTHO05D009624 4.2e-52 210.7 200 51.0
Psat7g062600 Pisum sativum HOM05D007669 ORTHO05D009624 8.1e-40 169.9 138 56.5
COL.COLO4_25058 Corchorus olitorius HOM05D007669 ORTHO05D009624 2.4e-39 168.3 166 51.8
DCAR_017991 Daucus carota HOM05D007669 ORTHO05D009624 5.8e-30 137.1 201 37.3
Glyma.13G102550 Glycine max HOM05D007669 ORTHO05D009624 1.0e-26 126.3 264 34.1
Haze_22063 Corylus avellana HOM05D007669 ORTHO05D009624 2.2e-21 108.6 178 43.8
Lj3A156T43 Lonicera japonica HOM05D007669 ORTHO05D009624 1.8e-18 99.0 147 40.1
MCO10G383 Micromonas commoda HOM05D024043 ORTHO05D009624 9.1e-15 86.7 117 40.2
Cre07.g356600 Chlamydomonas reinhardtii HOM05D007669 ORTHO05D009624 2.0e-14 85.5 103 45.6
PRCOL_00006584 Prasinoderma coloniale HOM05D024043 ORTHO05D009624 5.9e-14 84.0 138 38.4
COL.COLO4_25059 Corchorus olitorius HOM05D007669 ORTHO05D009624 1.0e-13 83.2 124 44.4
Psat4g139360 Pisum sativum HOM05D007669 ORTHO05D009624 1.0e-13 83.2 89 46.1
Pp3c25_1540 Physcomitrium patens HOM05D024043 ORTHO05D031244 3.8e-13 81.3 153 32.7
Mapoly0004s0046 Marchantia polymorpha HOM05D024043 ORTHO05D031244 2.5e-12 78.6 120 38.3
SEGI_25409 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 3.2e-12 78.2 220 26.8
Os04g0659150 Oryza sativa ssp. japonica HOM05D007669 ORTHO05D009624 7.2e-12 77.0 146 34.2
PRCOL_00001814 Prasinoderma coloniale HOM05D007669 ORTHO05D009624 4.6e-11 74.3 139 36.7
AagrBONN_evm.TU.Sc2ySwM_369.230 Anthoceros agrestis HOM05D024043 ORTHO05D031244 1.1e-09 69.7 214 25.2


User provided reference genes

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