Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G3975 Punica granatum HOM05D005455 ORTHO05D007017 1.2e-181 639.8 334 100.0
PGR042G0533 Punica granatum HOM05D005455 ORTHO05D007017 3.2e-62 243.0 249 57.4
PGR042G2019 Punica granatum HOM05D005455 ORTHO05D007017 1.0e-60 238.0 268 54.5
PGR042G2452 Punica granatum HOM05D005455 ORTHO05D007017 1.1e-51 208.0 287 50.5
TPR.G8005 Trifolium pratense HOM05D005455 ORTHO05D007017 1.3e-39 167.9 213 49.3
Sc05g0006390 Simmondsia chinensis HOM05D005455 ORTHO05D007017 1.7e-39 167.5 226 46.9
Cfa000960 Carpinus fangiana HOM05D005455 ORTHO05D007017 2.9e-39 166.8 221 47.1
Haze_05572 Corylus avellana HOM05D005455 ORTHO05D007017 2.9e-39 166.8 223 45.7
Hma1.2p1_0137F.1_g062520 Hydrangea macrophylla HOM05D005455 ORTHO05D007017 2.9e-39 166.8 278 41.0
Lalb_Chr12g0208911 Lupinus albus HOM05D005455 ORTHO05D007017 3.8e-39 166.4 208 48.1
Eucgr.E02392 Eucalyptus grandis HOM05D005455 ORTHO05D007017 6.4e-39 165.6 212 48.6
Psat4g033760 Pisum sativum HOM05D005455 ORTHO05D007017 6.4e-39 165.6 213 48.8
Lj4g0007804 Lotus japonicus HOM05D005455 ORTHO05D007017 1.1e-38 164.9 198 49.5
COL.COLO4_38289 Corchorus olitorius HOM05D005455 ORTHO05D007017 1.9e-38 164.1 243 43.6
CANSAT35G1403 Cannabis sativa HOM05D005455 ORTHO05D007017 2.4e-38 163.7 238 44.1
Sabra11G0068100 Salix brachista HOM05D005455 ORTHO05D007017 2.4e-38 163.7 220 46.4
Sabra11G0070500 Salix brachista HOM05D005455 ORTHO05D007017 2.4e-38 163.7 220 47.7
Ca_21657_v3 Cicer arietinum L. HOM05D005455 ORTHO05D007017 3.2e-38 163.3 214 48.6
Glyma.05G129900 Glycine max HOM05D005455 ORTHO05D007017 3.2e-38 163.3 204 50.0
Sabra11G0070400 Salix brachista HOM05D005455 ORTHO05D007017 3.2e-38 163.3 220 46.4
Phvul.002G194000 Phaseolus vulgaris HOM05D005455 ORTHO05D007017 4.2e-38 162.9 217 47.9
arahy.Tifrunner.gnm1.ann1.7EEG5T Arachis hypogaea HOM05D005455 ORTHO05D007017 5.4e-38 162.5 213 46.5
Dinv30721 Davidia involucrata HOM05D005455 ORTHO05D007017 5.4e-38 162.5 286 40.9
MSTRG.7476 Avicennia marina HOM05D005455 ORTHO05D007017 7.1e-38 162.2 268 41.0
Glyma.08G084600 Glycine max HOM05D005455 ORTHO05D007017 7.1e-38 162.2 199 51.3
Manes.17G068500 Manihot esculenta HOM05D005455 ORTHO05D007017 9.3e-38 161.8 193 50.3
VMungo0251G3477 Vigna mungo HOM05D005455 ORTHO05D007017 9.3e-38 161.8 215 47.4
Actinidia19517 Actinidia chinensis HOM05D005455 ORTHO05D007017 1.2e-37 161.4 270 41.1
QL05p058950 Quercus lobata HOM05D005455 ORTHO05D007017 1.2e-37 161.4 266 42.9
SGA_v2.0_scaffold333G48999 Striga asiatica HOM05D005455 ORTHO05D007017 1.2e-37 161.4 213 46.9
arahy.Tifrunner.gnm1.ann1.GU59FH Arachis hypogaea HOM05D005455 ORTHO05D007017 1.6e-37 161.0 213 46.0
Ciclev10016368m.g Citrus clementina HOM05D005455 ORTHO05D007017 1.6e-37 161.0 213 46.9
BolC4t27845H Brassica oleracea HOM05D005455 ORTHO05D007017 2.1e-37 160.6 226 43.4
Medtr4g115730 Medicago truncatula HOM05D005455 ORTHO05D007017 2.1e-37 160.6 213 48.4
GSVIVG01021427001 Vitis vinifera HOM05D005455 ORTHO05D007017 2.7e-37 160.2 256 44.1
Atru.chr10.1315 Acer truncatum HOM05D005455 ORTHO05D007017 3.5e-37 159.8 213 46.5
CiPaw.09G125700 Carya illinoinensis HOM05D005455 ORTHO05D007017 4.6e-37 159.5 213 46.5
Oeu042441.1 Olea europaea HOM05D005455 ORTHO05D007017 4.6e-37 159.5 213 46.0
Gohir.D09G078100 Gossypium hirsutum HOM05D005455 ORTHO05D007017 6.0e-37 159.1 285 41.1
Atru.chr10.1291 Acer truncatum HOM05D005455 ORTHO05D007017 7.9e-37 158.7 213 46.0
PSO541G1667 Papaver somniferum HOM05D005455 ORTHO05D007017 7.9e-37 158.7 193 50.3
Thecc.06G152800 Theobroma cacao HOM05D005455 ORTHO05D007017 7.9e-37 158.7 242 42.6
Migut.M00924 Erythranthe guttata HOM05D005455 ORTHO05D007017 1.0e-36 158.3 217 45.2
Cc09_g09230 Coffea canephora HOM05D005455 ORTHO05D007017 1.3e-36 157.9 219 47.0
Gohir.A09G077900 Gossypium hirsutum HOM05D005455 ORTHO05D007017 1.3e-36 157.9 278 40.6
MD05G1286400 Malus domestica HOM05D005455 ORTHO05D007017 1.3e-36 157.9 223 43.9
Aa31LG10G6920 Aethionema arabicum HOM05D005455 ORTHO05D007017 1.8e-36 157.5 231 42.9
CAN.G650.46 Capsicum annuum HOM05D005455 ORTHO05D007017 1.8e-36 157.5 221 45.2
Gorai.006G093300 Gossypium raimondii HOM05D005455 ORTHO05D007017 2.3e-36 157.1 285 40.7
TWI73G0942 Tripterygium wilfordii HOM05D005455 ORTHO05D007017 3.0e-36 156.8 213 46.0
SalBow8G4219 Salvia bowleyana HOM05D005455 ORTHO05D007017 3.9e-36 156.4 246 42.7
BcaB06g28771 Brassica carinata HOM05D005455 ORTHO05D007017 5.1e-36 156.0 225 42.7
Potri.011G079600 Populus trichocarpa HOM05D005455 ORTHO05D007017 5.1e-36 156.0 217 45.6
BraA04t18142Z Brassica rapa HOM05D005455 ORTHO05D007017 6.7e-36 155.6 232 42.2
MD10G1264000 Malus domestica HOM05D005455 ORTHO05D007017 6.7e-36 155.6 221 43.9
Ah.14g086480 Amaranthus hybridus HOM05D005455 ORTHO05D007017 8.7e-36 155.2 235 43.4
Lsat_1_v5_gn_0_45440 Lactuca sativa HOM05D005455 ORTHO05D007017 8.7e-36 155.2 221 43.0
Lsat_1_v5_gn_1_96821 Lactuca sativa HOM05D005455 ORTHO05D007017 8.7e-36 155.2 221 43.0
Sopen02g019840 Solanum pennellii HOM05D005455 ORTHO05D007017 8.7e-36 155.2 221 44.3
TAR627G0560 Trochodendron aralioides HOM05D005455 ORTHO05D007017 8.7e-36 155.2 213 46.0
unitig_899.g15137 Utricularia gibba HOM05D005455 ORTHO05D007017 8.7e-36 155.2 192 47.9
vmacro03379 Vaccinium macrocarpon HOM05D005455 ORTHO05D007017 8.7e-36 155.2 279 39.1
EL10As10g23968 Beta vulgaris HOM05D005455 ORTHO05D007017 1.1e-35 154.8 218 43.6
Carub.0004s1613 Capsella rubella HOM05D005455 ORTHO05D007017 1.1e-35 154.8 229 43.7
A04p26380 Brassica napus HOM05D005455 ORTHO05D007017 1.5e-35 154.5 226 42.5
Prupe.4G078500 Prunus persica HOM05D005455 ORTHO05D007017 1.5e-35 154.5 221 43.9
Solyc02g070770.3 Solanum lycopersicum HOM05D005455 ORTHO05D007017 1.5e-35 154.5 213 45.1
PGSC0003DMG400008307 Solanum tuberosum HOM05D005455 ORTHO05D007017 1.5e-35 154.5 221 44.3
Nitab4.5_0001040g0110 Nicotiana tabacum HOM05D005455 ORTHO05D007017 2.5e-35 153.7 213 45.5
Nitab4.5_0001655g0200 Nicotiana tabacum HOM05D005455 ORTHO05D007017 2.5e-35 153.7 234 42.7
AUR62027611 Chenopodium quinoa HOM05D005455 ORTHO05D007017 4.3e-35 152.9 219 42.9
Sabra11G0068400 Salix brachista HOM05D005455 ORTHO05D007017 4.3e-35 152.9 248 42.7
Cpa.g.sc166.26 Carica papaya HOM05D005455 ORTHO05D007017 5.6e-35 152.5 213 44.1
Actinidia16719 Actinidia chinensis HOM05D005455 ORTHO05D007017 7.4e-35 152.1 221 44.3
AL4G30430 Arabidopsis lyrata HOM05D005455 ORTHO05D007017 9.6e-35 151.8 259 40.9
MELO3C007143.2 Cucumis melo HOM05D005455 ORTHO05D007017 9.6e-35 151.8 193 48.2
AT2G34460 Arabidopsis thaliana HOM05D005455 ORTHO05D007017 1.3e-34 151.4 212 43.4
AUR62030234 Chenopodium quinoa HOM05D005455 ORTHO05D007017 1.3e-34 151.4 217 43.3
Sp4g16730 Schrenkiella parvula HOM05D005455 ORTHO05D007017 1.3e-34 151.4 240 40.4
DCAR_027944 Daucus carota HOM05D000361 ORTHO05D007313 1.6e-34 151.0 210 44.3
Rhsim13G0194200 Rhododendron simsii HOM05D005455 ORTHO05D007017 1.6e-34 151.0 213 44.1
HanXRQChr01g0020421 Helianthus annuus HOM05D005455 ORTHO05D007017 2.1e-34 150.6 213 46.0
CARHR128560 Cardamine hirsuta HOM05D005455 ORTHO05D007017 2.8e-34 150.2 235 41.7
THA.LOC104814289 Tarenaya hassleriana HOM05D005455 ORTHO05D007017 2.8e-34 150.2 261 40.6
Thhalv10017025m.g Eutrema salsugineum HOM05D005455 ORTHO05D007017 3.6e-34 149.8 231 41.6
Hund21522 Selenicereus undatus HOM05D005455 ORTHO05D007017 3.6e-34 149.8 213 44.1
FvH4_3g05850 Fragaria vesca HOM05D005455 ORTHO05D007017 8.1e-34 148.7 259 40.2
Peaxi162Scf00796g00115 Petunia axillaris HOM05D005455 ORTHO05D007017 1.1e-33 148.3 213 45.1
RcHm_v2.0_Chr5g0013671 Rosa chinensis HOM05D005455 ORTHO05D007017 1.1e-33 148.3 258 38.8
CsaV3_6G051640 Cucumis sativus L. HOM05D005455 ORTHO05D007017 1.4e-33 147.9 193 46.6
Sopen02g019830 Solanum pennellii HOM05D005455 ORTHO05D007017 4.0e-33 146.4 219 42.9
FAN21G2466 Fragaria x ananassa HOM05D005455 ORTHO05D007017 5.3e-33 146.0 194 46.4
FAN16G2406 Fragaria x ananassa HOM05D005455 ORTHO05D007017 6.9e-33 145.6 194 46.4
Solyc02g070760.4 Solanum lycopersicum HOM05D005455 ORTHO05D007017 6.9e-33 145.6 219 42.9
CAN.G650.43 Capsicum annuum HOM05D005455 ORTHO05D007017 1.2e-32 144.8 220 42.3
ATR0585G099 Amborella trichopoda HOM05D005455 ORTHO05D007017 1.5e-32 144.4 188 49.5
CDE06G1617 Ceratophyllum demersum HOM05D005455 ORTHO05D007017 1.5e-32 144.4 214 44.9
FAN11G2054 Fragaria x ananassa HOM05D005455 ORTHO05D007017 1.5e-32 144.4 194 45.9
Nitab4.5_0001040g0080 Nicotiana tabacum HOM05D005455 ORTHO05D007017 1.5e-32 144.4 213 43.2
Prupe.4G078400 Prunus persica HOM05D005455 ORTHO05D007017 1.5e-32 144.4 211 43.1
Nitab4.5_0001655g0160 Nicotiana tabacum HOM05D005455 ORTHO05D007017 3.4e-32 143.3 213 42.7
Nn3g20690 Nelumbo nucifera HOM05D005455 ORTHO05D007017 1.3e-31 141.4 193 45.1
HPP92_023862 Vanilla planifolia HOM05D005455 ORTHO05D007017 1.3e-31 141.4 207 43.5
ECA248G1055 Erigeron canadensis HOM05D005455 ORTHO05D007017 2.9e-31 140.2 213 41.8
MBI07_g15283_MAGBIO Magnolia biondii HOM05D005455 ORTHO05D007017 4.9e-31 139.4 210 44.8
Sed0026399 Sechium edule HOM05D005455 ORTHO05D007017 6.0e-29 132.5 193 44.0
SEGI_27230 Sequoiadendron giganteum HOM05D005455 ORTHO05D007017 6.0e-29 132.5 218 43.1
ClCG01G024520 Citrullus lanatus HOM05D005455 ORTHO05D007017 1.9e-27 127.5 226 41.2
Zm00001eb038110 Zea mays HOM05D005455 ORTHO05D007017 9.6e-27 125.2 190 41.6
Os06g0360300 Oryza sativa ssp. japonica HOM05D005455 ORTHO05D007017 2.8e-26 123.6 186 42.5
AagrBONN_evm.TU.Sc2ySwM_344.5105 Anthoceros agrestis HOM05D005455 ORTHO05D007017 4.0e-25 119.8 216 38.4
SMO353G0360 Selaginella moellendorffii HOM05D005455 ORTHO05D007017 1.0e-23 115.2 205 38.5
Pp3c6_24470 Physcomitrium patens HOM05D005455 ORTHO05D007017 4.2e-22 109.8 186 39.8
MD05G1286500 Malus domestica HOM05D005455 ORTHO05D007017 7.4e-19 99.0 137 44.5
Nn4g26542 Nelumbo nucifera HOM05D005455 ORTHO05D007017 2.8e-18 97.1 141 44.0
PRCOL_00003783 Prasinoderma coloniale HOM05D005455 ORTHO05D007017 2.0e-16 90.9 233 27.5
CARHR272540 Cardamine hirsuta HOM05D005455 ORTHO05D007017 2.9e-15 87.0 135 41.5
Cre11.g467755 Chlamydomonas reinhardtii HOM05D005455 ORTHO05D007017 5.0e-15 86.3 220 31.4
SMO171G0077 Selaginella moellendorffii HOM05D005455 ORTHO05D007017 6.7e-12 75.9 120 39.2
Pp3c10_3330 Physcomitrium patens HOM05D005785 ORTHO05D000513 8.7e-12 75.5 187 28.3
MCO09G634 Micromonas commoda HOM05D005455 ORTHO05D007017 2.5e-11 73.9 217 31.3
FAN25G0518 Fragaria x ananassa HOM05D005455 ORTHO05D007017 3.3e-11 73.6 79 46.8
Oeu033099.1 Olea europaea HOM05D005455 ORTHO05D007017 6.9e-09 65.9 81 45.7
Cre07.g349700 Chlamydomonas reinhardtii HOM05D005785 ORTHO05D007017 4.5e-08 63.2 189 30.2
Mapoly0002s0130 Marchantia polymorpha HOM05D005785 ORTHO05D007962 2.2e-07 60.8 235 23.4
SMO146G0207 Selaginella moellendorffii HOM05D005785 ORTHO05D007962 2.9e-07 60.5 190 28.4
CBR_g23485 Chara braunii HOM05D005785 ORTHO05D007962 1.4e-06 58.2 169 30.8


User provided reference genes

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