Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G3956 Punica granatum HOM05D008523 ORTHO05D010723 1.1e-207 726.5 374 100.0
GSVIVG01008905001 Vitis vinifera HOM05D008523 ORTHO05D010723 7.3e-100 368.2 318 61.6
Dinv40375 Davidia involucrata HOM05D008523 ORTHO05D010723 3.2e-95 352.8 338 58.9
Atru.chr13.1404 Acer truncatum HOM05D008523 ORTHO05D010723 1.3e-93 347.4 354 57.3
MD08G1168300 Malus domestica HOM05D008523 ORTHO05D010723 1.1e-92 344.4 305 61.3
TAR381G0860 Trochodendron aralioides HOM05D008523 ORTHO05D010723 4.3e-92 342.4 355 54.6
Nn1g08698 Nelumbo nucifera HOM05D008523 ORTHO05D010723 9.9e-89 331.3 329 53.8
CANSAT25G1340 Cannabis sativa HOM05D008523 ORTHO05D010723 5.6e-84 315.5 286 59.4
PSO170G6317 Papaver somniferum HOM05D008523 ORTHO05D010723 8.1e-83 311.6 321 53.6
Migut.C01156 Erythranthe guttata HOM05D008523 ORTHO05D010723 8.4e-80 301.6 278 57.6
Aqoxy6G00203 Aquilegia oxysepala HOM05D008523 ORTHO05D010723 5.4e-79 298.9 308 54.5
Rhsim07G0163700 Rhododendron simsii HOM05D008523 ORTHO05D010723 5.6e-76 288.9 287 55.4
Thecc.08G120800 Theobroma cacao HOM05D008523 ORTHO05D010723 2.1e-70 270.4 246 59.8
Solyc11g013090.2 Solanum lycopersicum HOM05D008523 ORTHO05D010723 7.9e-62 241.9 479 36.5
HPP92_005840 Vanilla planifolia HOM05D008523 ORTHO05D010723 2.8e-59 233.4 215 54.9
HPP92_005846 Vanilla planifolia HOM05D008523 ORTHO05D010723 1.1e-58 231.5 215 54.4
Ciclev10003859m.g Citrus clementina HOM05D008523 ORTHO05D010723 1.8e-58 230.7 208 62.5
Dinv01183 Davidia involucrata HOM05D008523 ORTHO05D010723 6.9e-58 228.8 193 63.2
QL05p051451 Quercus lobata HOM05D000038 ORTHO05D000423 2.9e-56 223.4 192 63.5
SEGI_03454 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 2.9e-56 223.4 176 63.6
SMO347G0131 Selaginella moellendorffii HOM05D008523 ORTHO05D010723 1.9e-55 220.7 173 61.8
AagrBONN_evm.TU.Sc2ySwM_362.1100 Anthoceros agrestis HOM05D008523 ORTHO05D010723 2.5e-55 220.3 183 59.6
CBR_g66722 Chara braunii HOM05D008523 ORTHO05D010723 9.4e-55 218.4 178 59.6
Nitab4.5_0004554g0040 Nicotiana tabacum HOM05D000038 ORTHO05D000423 1.6e-54 217.6 203 60.1
Nitab4.5_0010364g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000423 1.6e-54 217.6 201 60.2
Mapoly0082s0057 Marchantia polymorpha HOM05D008523 ORTHO05D010723 2.1e-54 217.2 194 56.2
Cfa015985 Carpinus fangiana HOM05D008523 ORTHO05D000423 3.6e-54 216.5 199 60.3
Pp3c11_25910 Physcomitrium patens HOM05D008523 ORTHO05D010723 7.9e-54 215.3 184 58.7
QL05p051411 Quercus lobata HOM05D000038 ORTHO05D000423 8.8e-53 211.8 210 58.1
Gorai.010G048500 Gossypium raimondii HOM05D000038 ORTHO05D000423 1.1e-50 204.9 203 58.1
HPP92_027951 Vanilla planifolia HOM05D008523 ORTHO05D010723 1.1e-50 204.9 223 50.7
Cpa.g.sc36.25 Carica papaya HOM05D008523 ORTHO05D010723 1.9e-47 194.1 176 59.7
Haze_00486 Corylus avellana HOM05D008523 ORTHO05D010723 2.0e-44 184.1 168 59.5
PRCOL_00001244 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 5.7e-44 182.6 158 58.2
Peaxi162Scf00451g00722 Petunia axillaris HOM05D000038 ORTHO05D000423 2.2e-43 180.6 136 66.9
MBI03_g26564_MAGBIO Magnolia biondii HOM05D008523 ORTHO05D010723 8.2e-43 178.7 185 50.3
Gohir.A06G042301 Gossypium hirsutum HOM05D008523 ORTHO05D010723 5.5e-39 166.0 177 56.5
MCO15G259 Micromonas commoda HOM05D008523 ORTHO05D010723 3.6e-38 163.3 179 46.4
PRCOL_00000745 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 4.7e-38 162.9 200 44.5
MBI03_g05982_MAGBIO Magnolia biondii HOM05D008523 ORTHO05D010723 7.4e-36 155.6 223 43.0
SalBow7G0429 Salvia bowleyana HOM05D008523 ORTHO05D010723 6.3e-35 152.5 153 57.5
PGSC0003DMG402000914 Solanum tuberosum HOM05D008523 ORTHO05D010723 3.8e-32 143.3 122 63.1
COL.COLO4_07273 Corchorus olitorius HOM05D000038 ORTHO05D000423 1.9e-31 141.0 159 49.7
Gohir.D06G043400 Gossypium hirsutum HOM05D000038 ORTHO05D000423 7.5e-28 129.0 168 47.6
Gohir.A06G042401 Gossypium hirsutum HOM05D000038 ORTHO05D000423 9.7e-28 128.6 135 53.3
Haze_00484 Corylus avellana HOM05D008523 ORTHO05D010723 2.8e-27 127.1 125 52.8
CSS0029332 Camellia sinensis var. sinensis HOM05D008523 ORTHO05D010723 4.1e-26 123.2 94 63.8
SalBow7G3869 Salvia bowleyana HOM05D008523 ORTHO05D010723 1.2e-25 121.7 152 48.7
PGSC0003DMG401000914 Solanum tuberosum HOM05D008523 ORTHO05D010723 5.0e-24 116.3 93 63.4
Sopen11g007810 Solanum pennellii HOM05D000038 ORTHO05D000423 2.1e-22 110.9 92 62.0
HPP92_009511 Vanilla planifolia HOM05D008523 ORTHO05D010723 6.6e-16 89.4 115 48.7
Duzib041G0488 Durio zibethinus HOM05D008523 ORTHO05D010723 3.6e-14 83.6 99 47.5
COL.COLO4_00988 Corchorus olitorius HOM05D008523 ORTHO05D010723 1.0e-13 82.0 131 33.6
Ca_31317_v3 Cicer arietinum L. HOM05D008523 ORTHO05D010723 5.2e-13 79.7 100 46.0
Ca_29195_v3 Cicer arietinum L. HOM05D008523 ORTHO05D010723 2.6e-12 77.4 193 33.2
SEGI_37575 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 3.7e-11 73.6 46 73.9
Nitab4.5_0029384g0020 Nicotiana tabacum HOM05D008523 ORTHO05D010723 5.0e-08 63.2 130 36.9


User provided reference genes

Program Settings