Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 5.6e-133 477.6 246 100.0
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 9.7e-109 397.1 224 87.5
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 1.6e-108 396.4 224 87.5
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 8.2e-108 394.0 224 86.6
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 8.2e-108 394.0 224 87.5
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 4.1e-107 391.7 224 87.1
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 9.0e-107 390.6 243 80.7
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 1.2e-106 390.2 238 80.7
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 2.0e-106 389.4 226 86.3
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 2.0e-106 389.4 226 86.3
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 2.0e-106 389.4 247 81.8
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 3.4e-106 388.7 226 84.5
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 4.5e-106 388.3 238 83.2
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 7.7e-106 387.5 225 87.1
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 7.7e-106 387.5 223 84.8
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 1.0e-105 387.1 225 84.4
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 1.3e-105 386.7 224 84.8
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 5.0e-105 384.8 223 84.8
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 6.5e-105 384.4 218 87.6
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 6.5e-105 384.4 223 83.9
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 1.4e-104 383.3 226 83.2
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 1.4e-104 383.3 222 85.6
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 1.9e-104 382.9 224 83.9
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 3.2e-104 382.1 223 84.8
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 4.2e-104 381.7 224 83.5
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 9.4e-104 380.6 223 83.9
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 1.6e-103 379.8 232 82.3
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 1.6e-103 379.8 227 83.7
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 2.1e-103 379.4 229 83.4
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 3.6e-103 378.6 218 84.9
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 3.6e-103 378.6 238 81.1
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 3.6e-103 378.6 225 81.8
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 3.6e-103 378.6 229 83.0
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 4.6e-103 378.3 222 83.8
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 6.1e-103 377.9 239 78.7
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 7.9e-103 377.5 251 77.3
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 7.9e-103 377.5 251 77.3
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 1.0e-102 377.1 222 83.3
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 1.4e-102 376.7 223 85.2
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 1.8e-102 376.3 229 83.0
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 3.0e-102 375.6 221 83.3
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 3.9e-102 375.2 221 83.3
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 3.9e-102 375.2 221 83.3
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 3.9e-102 375.2 241 79.3
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 5.1e-102 374.8 221 83.3
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 6.7e-102 374.4 221 82.4
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 2.0e-101 372.9 233 81.1
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 7.4e-101 370.9 230 82.6
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 1.7e-100 369.8 226 80.5
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 2.2e-100 369.4 236 80.5
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 3.7e-100 368.6 226 78.8
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 3.7e-100 368.6 226 78.8
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 1.8e-99 366.3 233 79.8
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 2.4e-99 365.9 222 81.5
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 5.3e-99 364.8 235 80.0
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 1.2e-98 363.6 215 82.8
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 1.5e-98 363.2 224 79.0
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 7.7e-98 360.9 237 79.3
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 1.3e-97 360.1 221 82.4
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 1.4e-96 356.7 227 78.4
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.4e-96 356.7 231 80.1
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 1.4e-96 356.7 231 80.1
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 6.7e-94 347.8 236 77.1
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 5.7e-93 344.7 246 72.0
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 9.7e-93 344.0 229 78.2
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 4.8e-92 341.7 229 77.7
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 3.1e-91 339.0 197 85.8
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 4.5e-90 335.1 224 75.9
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 1.0e-89 334.0 221 75.6
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 1.7e-89 333.2 229 72.5
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 1.1e-88 330.5 223 72.2
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 3.2e-88 328.9 230 71.3
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 2.1e-87 326.2 230 69.6
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 4.7e-87 325.1 223 69.5
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 1.0e-86 323.9 240 71.7
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 2.3e-86 322.8 230 71.7
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 2.3e-86 322.8 240 71.7
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 2.0e-85 319.7 227 70.9
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 7.5e-85 317.8 194 79.4
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 1.7e-84 316.6 194 80.4
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.7e-81 306.6 229 72.5
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 4.2e-80 302.0 168 86.9
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 2.1e-79 299.7 221 69.7
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 1.4e-78 297.0 193 76.2
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 1.0e-70 270.8 223 61.9
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 7.5e-69 264.6 242 60.3
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 4.1e-67 258.8 221 64.3
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 1.5e-61 240.4 133 85.7
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 2.2e-60 236.5 218 52.8
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 5.4e-59 231.9 139 82.7
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 9.5e-56 221.1 154 76.0
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 3.6e-55 219.2 222 52.3
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 8.9e-54 214.5 147 73.5
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 4.4e-53 212.2 241 49.8
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 5.2e-30 135.6 82 76.8
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 5.3e-22 109.0 217 31.3
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 4.3e-16 89.4 117 50.4
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 1.9e-11 73.9 57 64.9


User provided reference genes

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