Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 1.1e-122 443.4 225 100.0
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 7.6e-60 234.6 233 56.2
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 1.4e-53 213.8 236 51.7
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.9e-50 203.4 241 50.2
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 7.9e-49 198.0 231 48.9
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 7.9e-49 198.0 229 50.2
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 7.9e-49 198.0 241 48.5
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 1.5e-47 193.7 231 48.1
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 2.5e-47 193.0 231 48.9
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 5.6e-47 191.8 231 48.5
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 2.4e-45 186.4 233 47.6
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 5.3e-45 185.3 230 47.8
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 1.0e-43 181.0 231 45.9
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 6.5e-43 178.3 239 46.0
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 1.4e-42 177.2 232 46.6
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 3.2e-42 176.0 233 45.9
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 2.7e-41 172.9 233 44.2
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 2.7e-41 172.9 243 43.6
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 3.5e-41 172.6 224 46.0
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 3.5e-41 172.6 251 43.0
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 1.8e-40 170.2 233 43.3
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 3.9e-40 169.1 227 43.2
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 1.1e-39 167.5 243 42.8
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 2.5e-39 166.4 219 44.3
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 2.5e-39 166.4 244 43.0
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 3.3e-39 166.0 245 43.3
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 7.4e-39 164.9 250 42.0
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 1.3e-38 164.1 231 44.6
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 1.3e-38 164.1 171 56.1
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 1.6e-38 163.7 223 44.8
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 4.8e-38 162.2 239 43.1
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 1.1e-37 161.0 225 41.8
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 2.4e-37 159.8 234 42.7
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 1.2e-36 157.5 208 45.7
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 1.2e-36 157.5 227 43.2
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 1.0e-35 154.5 236 44.5
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 1.0e-35 154.5 238 41.2
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 1.7e-35 153.7 215 42.3
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 2.2e-35 153.3 227 38.8
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 2.9e-35 152.9 216 42.6
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 3.8e-35 152.5 238 41.6
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 3.8e-35 152.5 185 44.9
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 5.0e-35 152.1 239 40.6
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 6.5e-35 151.8 281 37.4
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 1.1e-34 151.0 225 42.2
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 4.6e-33 145.6 218 42.2
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 1.8e-32 143.7 200 44.5
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 5.1e-32 142.1 241 40.7
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 2.5e-31 139.8 246 36.6
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 4.3e-31 139.0 223 40.8
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 5.7e-31 138.7 223 42.6
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 2.2e-30 136.7 211 40.8
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 2.8e-30 136.3 238 39.5
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 1.1e-29 134.4 246 37.8
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 1.4e-29 134.0 246 38.2
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 1.7e-27 127.1 238 41.2
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 1.9e-26 123.6 215 39.1
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 7.9e-25 118.2 219 35.6
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 1.4e-24 117.5 226 36.3
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 1.1e-23 114.4 173 47.4
SalBow5G0344 Salvia bowleyana HOM05D005772 ORTHO05D006468 3.3e-23 112.8 234 36.8
SalBow5G3743 Salvia bowleyana HOM05D005772 ORTHO05D006468 2.8e-22 109.8 237 32.9
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 8.2e-22 108.2 194 36.1
BcaB07g32170 Brassica carinata HOM05D005772 ORTHO05D006468 3.1e-21 106.3 190 40.5
C05p20700 Brassica napus HOM05D005772 ORTHO05D006468 6.9e-21 105.1 196 37.2
Sabra05G0136400 Salix brachista HOM05D005772 ORTHO05D006468 5.9e-20 102.1 176 42.0
SalBow8G0153 Salvia bowleyana HOM05D005772 ORTHO05D006468 2.9e-19 99.8 233 31.8
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 5.0e-19 99.0 210 36.2
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 1.4e-18 97.4 226 29.2
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 1.9e-18 97.1 156 36.5
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 2.1e-17 93.6 162 34.6
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 1.0e-16 91.3 172 33.1
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 1.4e-16 90.9 199 32.2
Rhsim06G0101700 Rhododendron simsii HOM05D005772 ORTHO05D006468 1.8e-16 90.5 160 36.9
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 5.1e-16 89.0 189 32.8
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 1.1e-15 87.8 204 33.3
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 1.5e-15 87.4 140 33.6
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 3.3e-15 86.3 122 35.2
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 3.3e-15 86.3 156 35.3
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 5.7e-15 85.5 224 27.7
Haze_17513 Corylus avellana HOM05D000187 ORTHO05D000926 5.7e-15 85.5 203 35.0
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 5.7e-15 85.5 126 37.3
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 9.7e-15 84.7 195 34.4
unitig_22.g6227 Utricularia gibba HOM05D005772 ORTHO05D006468 9.7e-15 84.7 65 56.9
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.3e-14 84.3 126 35.7
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 1.3e-14 84.3 230 29.1
CSS0004874 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 1.7e-14 84.0 172 31.4
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 1.7e-14 84.0 167 30.5
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 1.7e-14 84.0 193 28.0
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 1.7e-14 84.0 196 34.2
Solyc11g018470.3 Solanum lycopersicum HOM05D005772 ORTHO05D006468 1.7e-14 84.0 180 38.9
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 2.2e-14 83.6 157 31.8
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 2.2e-14 83.6 230 26.1
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 6.3e-14 82.0 187 31.6
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 8.2e-14 81.6 196 32.7
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 8.2e-14 81.6 196 32.7
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 8.2e-14 81.6 228 30.3
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.8e-13 80.5 191 30.9
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 1.8e-13 80.5 132 31.1
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 5.3e-13 79.0 143 32.9
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 9.1e-13 78.2 196 30.6
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 9.1e-13 78.2 175 33.7
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 2.6e-12 76.6 196 32.1
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 3.5e-12 76.3 169 31.4
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 3.5e-12 76.3 216 27.3
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 5.9e-12 75.5 129 33.3
Carub.0002s2577 Capsella rubella HOM05D005772 ORTHO05D006468 1.7e-11 73.9 129 32.6
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 2.2e-11 73.6 241 29.5
Nitab4.5_0003012g0080 Nicotiana tabacum HOM05D005772 ORTHO05D006468 2.9e-11 73.2 50 64.0
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 2.5e-10 70.1 236 27.5
BcaB02g07187 Brassica carinata HOM05D005772 ORTHO05D006468 1.6e-09 67.4 127 33.9
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 1.6e-09 67.4 186 29.6
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 2.7e-09 66.6 127 33.9
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 2.7e-09 66.6 127 33.9
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 2.7e-09 66.6 127 33.9
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 3.6e-09 66.2 132 33.3
Lsat_1_v5_gn_8_150021 Lactuca sativa HOM05D041600 ORTHO05D006468 6.1e-09 65.5 175 35.4
AL2G39360 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 1.0e-08 64.7 121 28.9
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 1.8e-08 63.9 217 26.7
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 2.6e-07 60.1 188 29.3
Manes.14G007000 Manihot esculenta HOM05D005772 ORTHO05D006468 2.6e-07 60.1 232 26.7
SGA_v2.0_scaffold2751G54198 Striga asiatica HOM05D005772 ORTHO05D006468 2.6e-07 60.1 130 35.4
TPR.G38724 Trifolium pratense HOM05D003324 ORTHO05D006468 2.6e-07 60.1 144 31.9
THA.LOC104813627 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 9.7e-07 58.2 186 28.5
Sed0012770 Sechium edule HOM05D005772 ORTHO05D006468 2.2e-06 57.0 186 29.6
Zm00001eb215960 Zea mays HOM05D046982 ORTHO05D006468 4.8e-06 55.8 191 26.7
SHI31127 Sapria himalayana HOM05D005772 ORTHO05D006468 8.2e-06 55.1 61 36.1


User provided reference genes

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