Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 3.3e-110 401.7 206 100.0
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 4.5e-83 311.6 205 76.6
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.9e-82 308.9 208 76.9
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.9e-82 308.9 208 76.9
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 6.5e-82 307.8 208 76.4
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.4e-81 306.6 208 76.0
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 5.5e-81 304.7 200 76.5
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 7.1e-81 304.3 208 75.5
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 9.3e-81 303.9 206 74.3
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 1.2e-80 303.5 202 76.7
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 2.1e-80 302.8 207 76.3
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 2.1e-80 302.8 207 75.8
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 2.1e-80 302.8 201 75.6
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 3.5e-80 302.0 202 75.7
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 1.0e-79 300.4 206 72.3
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.8e-79 299.7 208 75.0
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 1.8e-79 299.7 199 73.4
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 2.3e-79 299.3 198 76.8
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 3.0e-79 298.9 209 74.2
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 5.1e-79 298.1 206 75.7
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 8.7e-79 297.4 203 74.9
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 1.1e-78 297.0 206 75.7
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 1.5e-78 296.6 206 75.2
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 1.9e-78 296.2 196 76.0
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 1.9e-78 296.2 199 76.4
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 2.5e-78 295.8 204 74.0
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 3.3e-78 295.4 206 75.2
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 5.7e-78 294.7 200 75.0
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 5.7e-78 294.7 199 74.4
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 5.7e-78 294.7 200 76.5
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 7.4e-78 294.3 206 75.2
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 9.7e-78 293.9 196 74.5
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 1.3e-77 293.5 197 75.6
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 2.1e-77 292.7 201 72.6
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 2.8e-77 292.4 207 74.4
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 3.7e-77 292.0 205 72.7
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 4.8e-77 291.6 201 75.1
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 6.3e-77 291.2 206 72.3
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 8.2e-77 290.8 206 73.8
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 1.4e-76 290.0 205 73.7
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 4.1e-76 288.5 199 73.9
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.1e-76 288.5 208 73.6
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 5.3e-76 288.1 201 73.6
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 9.0e-76 287.3 204 70.6
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 2.0e-75 286.2 199 72.9
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 2.6e-75 285.8 199 73.4
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 2.6e-75 285.8 206 69.9
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 4.5e-75 285.0 199 72.9
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 1.3e-74 283.5 202 72.3
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 1.9e-73 279.6 201 70.6
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 4.2e-73 278.5 199 71.4
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 9.3e-73 277.3 199 70.9
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 2.1e-72 276.2 199 72.9
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 2.7e-72 275.8 201 73.1
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 4.6e-72 275.0 200 71.5
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 7.9e-72 274.2 199 72.9
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 1.3e-71 273.5 205 68.3
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 5.1e-71 271.6 205 70.2
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 6.7e-71 271.2 208 69.2
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 9.7e-70 267.3 199 69.3
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 1.3e-69 266.9 199 69.3
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 2.8e-69 265.8 207 69.1
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 4.8e-69 265.0 200 68.0
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 6.3e-69 264.6 201 68.7
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 1.1e-68 263.8 207 69.6
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 1.4e-68 263.5 196 69.9
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 3.1e-68 262.3 207 69.1
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 5.3e-68 261.5 206 66.0
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 5.3e-68 261.5 198 67.7
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 1.2e-67 260.4 196 68.4
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 1.2e-67 260.4 200 66.5
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 1.5e-67 260.0 204 68.1
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 2.0e-67 259.6 199 67.8
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 2.0e-67 259.6 201 69.2
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 2.6e-67 259.2 197 66.5
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 3.4e-67 258.8 204 65.7
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 3.4e-67 258.8 201 68.2
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 7.7e-67 257.7 198 67.2
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 3.8e-66 255.4 196 69.4
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.4e-65 253.4 190 70.5
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 2.5e-65 252.7 204 66.2
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 2.1e-64 249.6 205 63.4
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 3.6e-64 248.8 200 66.0
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 7.9e-64 247.7 228 59.2
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 2.0e-62 243.0 196 65.3
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 7.4e-62 241.1 203 62.1
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 1.3e-61 240.4 227 58.1
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 2.0e-59 233.0 204 59.3
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 2.6e-59 232.6 196 65.3
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 3.4e-59 232.3 199 61.3
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.1e-56 223.0 208 60.6
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 5.2e-55 218.4 145 75.9
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 1.1e-54 217.2 190 62.1
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 2.0e-54 216.5 195 62.1
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 5.7e-54 214.9 202 58.9
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 4.1e-52 208.8 184 61.4
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 1.6e-51 206.8 206 54.4
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 9.7e-46 187.6 174 60.9
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 5.0e-42 175.3 203 50.2
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 4.2e-41 172.2 137 67.2
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 1.6e-40 170.2 211 46.0
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 3.6e-40 169.1 141 63.1
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 4.8e-37 158.7 174 54.6
BcaC01g06168 Brassica carinata HOM05D006363 ORTHO05D007920 3.7e-29 132.5 92 73.9
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 1.1e-25 120.9 86 70.9
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 1.2e-22 110.9 151 46.4
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 1.2e-19 100.9 93 61.3
Pp3c17_12800 Physcomitrium patens HOM05D006363 ORTHO05D007920 3.5e-19 99.4 312 29.2
C05p38730 Brassica napus HOM05D006363 ORTHO05D007920 4.6e-19 99.0 93 60.2
TAR633G0106 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.1e-17 94.4 72 65.3
TPR.G33086 Trifolium pratense HOM05D006363 ORTHO05D007920 2.8e-16 89.7 62 77.4
TAR291G0005 Trochodendron aralioides HOM05D006363 ORTHO05D007920 3.6e-16 89.4 71 64.8
TAR375G0495 Trochodendron aralioides HOM05D006363 ORTHO05D007920 3.6e-16 89.4 71 64.8
TAR624G1193 Trochodendron aralioides HOM05D006363 ORTHO05D007920 3.6e-16 89.4 71 64.8
TAR614G0003 Trochodendron aralioides HOM05D006363 ORTHO05D007920 8.0e-16 88.2 71 64.8
TAR633G1276 Trochodendron aralioides HOM05D006363 ORTHO05D007920 8.0e-16 88.2 71 64.8
TAR629G0450 Trochodendron aralioides HOM05D006363 ORTHO05D007920 3.1e-15 86.3 71 63.4
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 5.2e-15 85.5 71 62.0
BcaC01g06167 Brassica carinata HOM05D006363 ORTHO05D007920 1.3e-13 80.9 47 78.7
Actinidia03116 Actinidia chinensis HOM05D006363 ORTHO05D007920 3.7e-13 79.3 112 48.2
BcaC05g27871 Brassica carinata HOM05D006363 ORTHO05D007920 1.1e-12 77.8 100 53.0
A01p23910 Brassica napus HOM05D006363 ORTHO05D007920 2.0e-06 57.0 50 60.0
BraA01t02298Z Brassica rapa HOM05D006363 ORTHO05D007920 2.0e-06 57.0 50 60.0


User provided reference genes

Program Settings