Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 7.1e-74 280.4 133 100.0
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 7.4e-63 243.8 133 82.0
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 3.7e-62 241.5 133 81.2
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 1.1e-61 240.0 133 80.5
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 1.1e-61 240.0 133 80.5
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 1.1e-61 240.0 133 80.5
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 6.9e-61 237.3 133 79.7
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 2.6e-60 235.3 133 78.2
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 2.6e-60 235.3 133 80.5
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 4.5e-60 234.6 133 78.9
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 7.7e-60 233.8 133 78.9
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 7.7e-60 233.8 133 78.2
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 1.3e-59 233.0 133 78.2
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 1.3e-59 233.0 130 80.8
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 1.7e-59 232.6 133 77.4
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 1.7e-59 232.6 130 79.2
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 2.2e-59 232.3 130 80.0
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 2.9e-59 231.9 130 78.5
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 3.8e-59 231.5 133 77.4
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 5.0e-59 231.1 129 79.1
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 8.5e-59 230.3 130 77.7
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 8.5e-59 230.3 133 78.2
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 8.5e-59 230.3 133 78.2
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 1.1e-58 229.9 133 76.7
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 1.1e-58 229.9 133 76.7
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 1.1e-58 229.9 133 76.7
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 1.1e-58 229.9 133 75.2
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 1.4e-58 229.6 133 75.9
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 1.4e-58 229.6 131 78.6
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 1.4e-58 229.6 133 77.4
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 1.9e-58 229.2 129 79.1
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 2.5e-58 228.8 129 79.8
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 2.5e-58 228.8 133 75.9
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 3.2e-58 228.4 133 78.2
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 4.2e-58 228.0 129 79.8
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 4.2e-58 228.0 130 76.9
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 4.2e-58 228.0 130 76.9
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 7.2e-58 227.3 133 77.4
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 7.2e-58 227.3 133 75.2
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 9.4e-58 226.9 133 75.2
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 1.2e-57 226.5 133 74.4
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 2.1e-57 225.7 133 75.2
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 2.1e-57 225.7 133 75.2
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 2.1e-57 225.7 133 72.2
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 6.1e-57 224.2 130 74.6
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 1.0e-56 223.4 133 73.7
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 1.8e-56 222.6 130 74.6
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 3.0e-56 221.9 133 75.9
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 3.0e-56 221.9 129 76.0
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 6.7e-56 220.7 133 73.7
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 6.7e-56 220.7 132 75.8
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 6.7e-56 220.7 133 72.2
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 6.7e-56 220.7 134 76.1
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 1.1e-55 219.9 132 76.5
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 1.1e-55 219.9 132 76.5
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 2.0e-55 219.2 127 76.4
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 2.5e-55 218.8 133 75.2
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 2.5e-55 218.8 135 74.8
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 2.5e-55 218.8 130 74.6
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 7.4e-55 217.2 133 73.7
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 2.8e-54 215.3 133 75.2
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 4.8e-54 214.5 133 72.2
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 4.8e-54 214.5 175 60.0
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 6.3e-54 214.2 130 73.8
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 1.1e-53 213.4 130 73.1
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 3.1e-53 211.8 132 75.8
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 4.1e-53 211.5 133 69.9
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 5.3e-53 211.1 130 70.8
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 9.1e-53 210.3 133 71.4
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 9.1e-53 210.3 133 72.2
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 1.2e-52 209.9 129 72.9
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 1.5e-52 209.5 133 68.4
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 1.5e-52 209.5 130 71.5
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 3.4e-52 208.4 129 71.3
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 3.4e-52 208.4 130 71.5
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 5.9e-52 207.6 133 69.2
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 6.5e-51 204.1 134 72.4
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 1.4e-50 203.0 130 69.2
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 4.2e-50 201.4 130 71.5
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 2.7e-49 198.7 130 70.0
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 8.8e-48 193.7 129 65.9
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 1.1e-47 193.4 126 70.6
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 1.1e-47 193.4 131 64.9
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 3.3e-47 191.8 129 66.7
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 5.7e-47 191.0 130 66.2
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 2.4e-45 185.7 227 43.6
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 2.2e-43 179.1 131 58.8
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 2.2e-43 179.1 131 58.0
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 2.2e-43 179.1 131 58.0
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 2.9e-43 178.7 131 58.8
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 3.8e-43 178.3 131 59.5
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 5.0e-43 177.9 131 58.0
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 6.5e-43 177.6 131 59.5
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 1.1e-42 176.8 131 56.5
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 1.1e-42 176.8 131 56.5
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 1.1e-42 176.8 131 56.5
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 1.9e-42 176.0 133 61.7
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 5.5e-42 174.5 131 58.0
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 9.4e-42 173.7 131 57.3
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 9.4e-42 173.7 156 56.4
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 1.2e-41 173.3 129 58.9
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 8.0e-41 170.6 136 58.1
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 3.9e-40 168.3 133 60.2
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 5.2e-40 167.9 126 61.9
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 1.1e-39 166.8 132 57.6
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 2.0e-39 166.0 130 55.4
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 4.1e-37 158.3 85 81.2
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 7.0e-37 157.5 129 57.4
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 5.9e-36 154.5 85 81.2
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 6.5e-35 151.0 122 58.2
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 7.2e-34 147.5 130 52.3
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 9.4e-34 147.1 83 77.1
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 2.3e-32 142.5 102 58.8
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 2.3e-32 142.5 129 53.5
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 5.0e-27 124.8 76 73.7
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 9.4e-26 120.6 119 52.1
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 8.0e-25 117.5 67 76.1
MD01G1062200 Malus domestica HOM05D006442 ORTHO05D007980 5.0e-19 98.2 72 65.3
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 9.5e-18 94.0 55 69.1
Aa31LG8G5750 Aethionema arabicum HOM05D006442 ORTHO05D007980 1.2e-17 93.6 126 38.9
CsaV3_3G032380 Cucumis sativus L. HOM05D002156 ORTHO05D002328 2.4e-13 79.3 48 75.0
MELO3C023952.2 Cucumis melo HOM05D002156 ORTHO05D002328 9.2e-13 77.4 48 70.8
Cre07.g315100 Chlamydomonas reinhardtii HOM05D006442 ORTHO05D007980 1.5e-10 70.1 115 33.9
AL8G12830 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 5.6e-10 68.2 52 57.7
MD00G1052400 Malus domestica HOM05D006442 ORTHO05D007980 6.1e-09 64.7 42 66.7
AL5G40550 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 8.0e-09 64.3 46 60.9


User provided reference genes

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