Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G3076 Punica granatum HOM05D007312 ORTHO05D009209 2.3e-66 255.4 126 100.0
TWI63G0684 Tripterygium wilfordii HOM05D007312 ORTHO05D009209 3.6e-51 204.9 126 81.7
Atru.chr10.560 Acer truncatum HOM05D007312 ORTHO05D009209 4.7e-51 204.5 126 81.7
Duzib052G0161 Durio zibethinus HOM05D007312 ORTHO05D009209 3.1e-50 201.8 117 86.3
Manes.16G055800 Manihot esculenta HOM05D007312 ORTHO05D009209 3.1e-50 201.8 127 80.3
Ciclev10017175m.g Citrus clementina HOM05D007312 ORTHO05D009209 8.9e-50 200.3 130 79.2
Gohir.A12G046700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 8.9e-50 200.3 127 81.1
Potri.012G124500 Populus trichocarpa HOM05D007312 ORTHO05D009209 8.9e-50 200.3 127 80.3
QL11p016282 Quercus lobata HOM05D007312 ORTHO05D009209 8.9e-50 200.3 125 78.4
CANSAT35G0781 Cannabis sativa HOM05D007312 ORTHO05D009209 1.5e-49 199.5 126 80.2
MD05G1250400 Malus domestica HOM05D007312 ORTHO05D009209 3.4e-49 198.4 129 79.8
BcaC07g37774 Brassica carinata HOM05D007312 ORTHO05D009209 7.5e-49 197.2 120 83.3
Nitab4.5_0007745g0050 Nicotiana tabacum HOM05D007312 ORTHO05D009209 9.8e-49 196.8 128 80.5
CiPaw.09G076400 Carya illinoinensis HOM05D007312 ORTHO05D009209 1.7e-48 196.1 126 76.2
GSVIVG01012104001 Vitis vinifera HOM05D007312 ORTHO05D009209 2.2e-48 195.7 126 78.6
Cc09_g06000 Coffea canephora HOM05D007312 ORTHO05D009209 2.9e-48 195.3 126 79.4
MSTRG.7597 Avicennia marina HOM05D007312 ORTHO05D009209 3.7e-48 194.9 128 79.7
Thhalv10009117m.g Eutrema salsugineum HOM05D007312 ORTHO05D009209 8.3e-48 193.7 127 78.7
BcaB04g18176 Brassica carinata HOM05D007312 ORTHO05D009209 1.1e-47 193.4 120 81.7
AL1G49340 Arabidopsis lyrata HOM05D007312 ORTHO05D009209 3.2e-47 191.8 127 77.2
Medtr4g084180 Medicago truncatula HOM05D007312 ORTHO05D009209 4.1e-47 191.4 126 77.0
Sp1g26990 Schrenkiella parvula HOM05D007312 ORTHO05D009209 4.1e-47 191.4 119 81.5
AT1G31170 Arabidopsis thaliana HOM05D007312 ORTHO05D009209 5.4e-47 191.0 127 77.2
EL10Ac5g12681 Beta vulgaris HOM05D007312 ORTHO05D009209 5.4e-47 191.0 126 77.0
CARHR030640 Cardamine hirsuta HOM05D007312 ORTHO05D009209 5.4e-47 191.0 127 76.4
ClCG01G009570 Citrullus lanatus HOM05D007312 ORTHO05D009209 5.4e-47 191.0 119 79.8
MELO3C021735.2 Cucumis melo HOM05D007312 ORTHO05D009209 5.4e-47 191.0 119 79.8
Ca_18754_v3 Cicer arietinum L. HOM05D007312 ORTHO05D009209 1.2e-46 189.9 128 75.8
Hma1.2p1_1005F.1_g246920 Hydrangea macrophylla HOM05D007312 ORTHO05D009209 1.2e-46 189.9 131 76.3
CSS0025621 Camellia sinensis var. sinensis HOM05D007312 ORTHO05D009209 1.6e-46 189.5 128 73.4
CsaV3_1G046220 Cucumis sativus L. HOM05D007312 ORTHO05D009209 1.6e-46 189.5 119 79.0
Sopen02g017880 Solanum pennellii HOM05D007312 ORTHO05D009209 1.6e-46 189.5 129 77.5
PGSC0003DMG400010438 Solanum tuberosum HOM05D007312 ORTHO05D009209 1.6e-46 189.5 129 77.5
TPR.G38271 Trifolium pratense HOM05D007312 ORTHO05D009209 1.6e-46 189.5 126 77.0
Nitab4.5_0001288g0230 Nicotiana tabacum HOM05D007312 ORTHO05D009209 2.0e-46 189.1 128 78.1
TAR624G0630 Trochodendron aralioides HOM05D007312 ORTHO05D009209 2.0e-46 189.1 126 73.8
Glyma.20G019100 Glycine max HOM05D007312 ORTHO05D009209 4.6e-46 188.0 129 76.0
Peaxi162Scf00149g00224 Petunia axillaris HOM05D007312 ORTHO05D009209 4.6e-46 188.0 128 78.9
VMungo0251G1106 Vigna mungo HOM05D007312 ORTHO05D009209 4.6e-46 188.0 129 73.6
BolC8t48163H Brassica oleracea HOM05D007312 ORTHO05D009209 7.8e-46 187.2 115 82.6
Phvul.002G097300 Phaseolus vulgaris HOM05D007312 ORTHO05D009209 1.3e-45 186.4 129 73.6
Solyc02g068710.3 Solanum lycopersicum HOM05D007312 ORTHO05D009209 2.3e-45 185.7 129 76.7
Actinidia22408 Actinidia chinensis HOM05D007312 ORTHO05D009209 3.9e-45 184.9 126 74.6
Sabra12G0094300 Salix brachista HOM05D007312 ORTHO05D009209 3.9e-45 184.9 122 78.7
AUR62010557 Chenopodium quinoa HOM05D007312 ORTHO05D009209 5.0e-45 184.5 121 77.7
Hund14701 Selenicereus undatus HOM05D007312 ORTHO05D009209 5.0e-45 184.5 124 76.6
Ah.01g020500 Amaranthus hybridus HOM05D007312 ORTHO05D009209 6.6e-45 184.1 121 78.5
Carub.0001s2957 Capsella rubella HOM05D007312 ORTHO05D009209 6.6e-45 184.1 127 76.4
A08p10710 Brassica napus HOM05D007312 ORTHO05D009209 8.6e-45 183.7 116 80.2
BraA08t33069Z Brassica rapa HOM05D007312 ORTHO05D009209 8.6e-45 183.7 116 80.2
ECA234G3951 Erigeron canadensis HOM05D007312 ORTHO05D009209 1.9e-44 182.6 131 72.5
Zm00001eb375250 Zea mays HOM05D007312 ORTHO05D009209 1.9e-44 182.6 118 77.1
Os06g0174300 Oryza sativa ssp. japonica HOM05D007312 ORTHO05D009209 2.5e-44 182.2 113 79.6
Eucgr.E04250 Eucalyptus grandis HOM05D007312 ORTHO05D009209 3.3e-44 181.8 135 71.9
HanXRQChr12g0381571 Helianthus annuus HOM05D007312 ORTHO05D009209 3.3e-44 181.8 130 73.1
RcHm_v2.0_Chr5g0020311 Rosa chinensis HOM05D007312 ORTHO05D009209 3.3e-44 181.8 129 72.1
Lsat_1_v5_gn_3_106761 Lactuca sativa HOM05D007312 ORTHO05D009209 5.6e-44 181.0 115 80.0
SalBow8G4543 Salvia bowleyana HOM05D007312 ORTHO05D009209 1.6e-43 179.5 124 76.6
SGA_v2.0_scaffold298G47689 Striga asiatica HOM05D007312 ORTHO05D009209 2.1e-43 179.1 130 73.1
Lj4g0021225 Lotus japonicus HOM05D007312 ORTHO05D009209 3.6e-43 178.3 129 72.9
Lj2A350T56 Lonicera japonica HOM05D007312 ORTHO05D009209 4.7e-43 177.9 113 77.0
MBI18_g11473_MAGBIO Magnolia biondii HOM05D007312 ORTHO05D009209 6.2e-43 177.6 111 77.5
RhsimUnG0109200 Rhododendron simsii HOM05D007312 ORTHO05D009209 1.1e-42 176.8 109 79.8
AUR62017332 Chenopodium quinoa HOM05D007312 ORTHO05D009209 5.2e-42 174.5 121 74.4
Lalb_Chr16g0385171 Lupinus albus HOM05D007312 ORTHO05D009209 5.2e-42 174.5 127 70.1
Rhsim13G0146500 Rhododendron simsii HOM05D007312 ORTHO05D009209 6.8e-42 174.1 109 78.9
Aa31LG2G15110 Aethionema arabicum HOM05D007312 ORTHO05D009209 1.5e-41 172.9 107 77.6
Migut.M01988 Erythranthe guttata HOM05D007312 ORTHO05D009209 1.5e-41 172.9 104 82.7
FvH4_3g12430 Fragaria vesca HOM05D007312 ORTHO05D009209 2.6e-41 172.2 124 71.8
THA.LOC104798553 Tarenaya hassleriana HOM05D007312 ORTHO05D009209 3.4e-41 171.8 122 73.0
unitig_32.g10991 Utricularia gibba HOM05D000532 ORTHO05D009209 7.5e-41 170.6 97 81.4
CDE02G1125 Ceratophyllum demersum HOM05D007312 ORTHO05D009209 9.8e-41 170.2 118 72.0
PSO541G3426 Papaver somniferum HOM05D007312 ORTHO05D009209 2.2e-40 169.1 108 75.0
Psat7g129800 Pisum sativum HOM05D007312 ORTHO05D009209 1.1e-39 166.8 116 74.1
CAN.G149.9 Capsicum annuum HOM05D007312 ORTHO05D009209 1.9e-39 166.0 100 83.0
arahy.Tifrunner.gnm1.ann1.XDA00H Arachis hypogaea HOM05D007312 ORTHO05D009209 3.2e-39 165.2 125 71.2
vmacro03527 Vaccinium macrocarpon HOM05D007312 ORTHO05D009209 1.2e-38 163.3 99 79.8
Haze_06075 Corylus avellana HOM05D007312 ORTHO05D009209 6.0e-38 161.0 122 69.7
arahy.Tifrunner.gnm1.ann1.FJ5394 Arachis hypogaea HOM05D007312 ORTHO05D009209 1.0e-37 160.2 102 78.4
HPP92_010212 Vanilla planifolia HOM05D007312 ORTHO05D009209 1.0e-37 160.2 110 72.7
Aqoxy1G01718 Aquilegia oxysepala HOM05D007312 ORTHO05D009209 5.1e-37 157.9 127 65.4
Nn7g38246 Nelumbo nucifera HOM05D007312 ORTHO05D009209 1.5e-36 156.4 126 67.5
Pp3c7_15740 Physcomitrium patens HOM05D007312 ORTHO05D009209 5.6e-36 154.5 90 77.8
SMO145G0246 Selaginella moellendorffii HOM05D007312 ORTHO05D009209 1.4e-34 149.8 85 77.6
Mapoly0066s0018 Marchantia polymorpha HOM05D007312 ORTHO05D009209 8.4e-32 140.6 167 49.7
RcHm_v2.0_Chr2g0126261 Rosa chinensis HOM05D007312 ORTHO05D009209 3.9e-29 131.7 85 75.3
Cre17.g729950 Chlamydomonas reinhardtii HOM05D007312 ORTHO05D009209 1.5e-28 129.8 95 66.3
CBR_g4 Chara braunii HOM05D007312 ORTHO05D009209 2.5e-28 129.0 88 69.3
Dinv25919 Davidia involucrata HOM05D007312 ORTHO05D009209 1.1e-26 123.6 90 72.2
Oeu056034.1 Olea europaea HOM05D007312 ORTHO05D009209 6.8e-26 120.9 90 74.4
Prupe.4G113200 Prunus persica HOM05D007312 ORTHO05D009209 1.5e-25 119.8 95 70.5
HPP92_010191 Vanilla planifolia HOM05D007312 ORTHO05D009209 2.6e-25 119.0 115 59.1
Sc01g0008940 Simmondsia chinensis HOM05D007312 ORTHO05D009209 7.8e-22 107.5 81 70.4
Thecc.02G008700 Theobroma cacao HOM05D007312 ORTHO05D009209 7.8e-22 107.5 85 70.6
Cpa.g.sc5085.1 Carica papaya HOM05D007312 ORTHO05D009209 1.9e-20 102.8 78 71.8
FAN25G0614 Fragaria x ananassa HOM05D007312 ORTHO05D009209 1.9e-20 102.8 96 63.5
Gohir.D12G045700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 1.9e-20 102.8 80 70.0
Gorai.008G048300 Gossypium raimondii HOM05D007312 ORTHO05D009209 1.9e-20 102.8 80 70.0
Sed0015339 Sechium edule HOM05D007312 ORTHO05D009209 6.9e-18 94.4 73 69.9
ATR0752G167 Amborella trichopoda HOM05D007312 ORTHO05D009209 1.5e-17 93.2 95 55.8
COL.COLO4_17652 Corchorus olitorius HOM05D007312 ORTHO05D009209 1.1e-15 87.0 84 57.1
FAN21G0246 Fragaria x ananassa HOM05D007312 ORTHO05D009209 1.9e-15 86.3 84 58.3
Sabra12G0063500 Salix brachista HOM05D007312 ORTHO05D009209 4.2e-15 85.1 52 82.7
FAN16G3369 Fragaria x ananassa HOM05D007312 ORTHO05D009209 5.4e-15 84.7 81 60.5
Lalb_Chr09g0328681 Lupinus albus HOM05D007312 ORTHO05D009209 3.5e-14 82.0 41 82.9
Potri.015G124601 Populus trichocarpa HOM05D007312 ORTHO05D009209 1.1e-07 60.5 42 64.3
Lalb_Chr09g0328671 Lupinus albus HOM05D007312 ORTHO05D009209 3.2e-07 58.9 89 43.8


User provided reference genes

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