Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G2567 Punica granatum HOM05D008143 ORTHO05D010256 1.1e-41 172.9 94 100.0
Cpa.g.sc41.41 Carica papaya HOM05D008143 ORTHO05D010256 2.1e-19 99.0 77 68.8
Ca_26206_v3 Cicer arietinum L. HOM05D008143 ORTHO05D010256 1.0e-18 96.7 72 72.2
CiPaw.14G012000 Carya illinoinensis HOM05D008143 ORTHO05D010256 3.9e-18 94.7 86 66.3
Medtr7g034335 Medicago truncatula HOM05D008143 ORTHO05D010256 2.5e-17 92.0 90 58.9
GSVIVG01026763001 Vitis vinifera HOM05D008143 ORTHO05D010256 4.3e-17 91.3 71 70.4
Atru.chr5.8 Acer truncatum HOM05D008143 ORTHO05D010256 5.7e-17 90.9 78 64.1
Dinv43993 Davidia involucrata HOM05D008143 ORTHO05D010256 7.4e-17 90.5 72 69.4
Lj1g0022952 Lotus japonicus HOM05D008143 ORTHO05D010256 9.7e-17 90.1 77 62.3
Dinv43549 Davidia involucrata HOM05D000307 ORTHO05D010256 2.2e-16 89.0 69 69.6
Dinv43557 Davidia involucrata HOM05D008143 ORTHO05D010256 2.2e-16 89.0 69 69.6
QL04p024258 Quercus lobata HOM05D008143 ORTHO05D010256 2.8e-16 88.6 71 67.6
Sed0007849 Sechium edule HOM05D000473 ORTHO05D009707 4.8e-16 87.8 81 61.7
arahy.Tifrunner.gnm1.ann1.H93UBA Arachis hypogaea HOM05D008143 ORTHO05D010256 6.3e-16 87.4 72 68.1
Migut.N01814 Erythranthe guttata HOM05D008143 ORTHO05D010256 6.3e-16 87.4 69 71.0
Psat3g161880 Pisum sativum HOM05D008143 ORTHO05D010256 1.1e-15 86.7 71 66.2
PGSC0003DMG400001819 Solanum tuberosum HOM05D008143 ORTHO05D010256 1.8e-15 85.9 69 69.6
MD00G1098100 Malus domestica HOM05D008143 ORTHO05D010256 3.1e-15 85.1 64 70.3
Oeu020235.1 Olea europaea HOM05D008143 ORTHO05D010256 3.1e-15 85.1 88 54.5
Ciclev10023977m.g Citrus clementina HOM05D008143 ORTHO05D010256 4.1e-15 84.7 93 53.8
Glyma.04G128500 Glycine max HOM05D008143 ORTHO05D010256 6.9e-15 84.0 72 61.1
Glyma.06G310300 Glycine max HOM05D008143 ORTHO05D010256 6.9e-15 84.0 72 59.7
Sopen01g032540 Solanum pennellii HOM05D008143 ORTHO05D010256 6.9e-15 84.0 69 69.6
Prupe.2G109300 Prunus persica HOM05D008143 ORTHO05D010256 9.0e-15 83.6 64 67.2
Solyc01g080950.3 Solanum lycopersicum HOM05D008143 ORTHO05D010256 9.0e-15 83.6 91 56.0
FvH4_7g08030 Fragaria vesca HOM05D008143 ORTHO05D010256 2.0e-14 82.4 64 71.9
FAN01G0067 Fragaria x ananassa HOM05D008143 ORTHO05D010256 2.0e-14 82.4 64 71.9
FAN10G1551 Fragaria x ananassa HOM05D008143 ORTHO05D010256 2.0e-14 82.4 64 71.9
RcHm_v2.0_Chr1g0341271 Rosa chinensis HOM05D008143 ORTHO05D010256 2.0e-14 82.4 64 70.3
TWI59G0267 Tripterygium wilfordii HOM05D008143 ORTHO05D010256 2.0e-14 82.4 89 55.1
Duzib128G1063 Durio zibethinus HOM05D008143 ORTHO05D010256 4.5e-14 81.3 66 66.7
arahy.Tifrunner.gnm1.ann1.3N3IDJ Arachis hypogaea HOM05D008143 ORTHO05D010256 5.9e-14 80.9 72 65.3
CAN.G700.4 Capsicum annuum HOM05D008143 ORTHO05D010256 5.9e-14 80.9 98 52.0
SHI04152 Sapria himalayana HOM05D008143 ORTHO05D010256 7.7e-14 80.5 59 72.9
Lalb_Chr19g0126471 Lupinus albus HOM05D008143 ORTHO05D010256 1.3e-13 79.7 89 57.3
Thecc.10G157800 Theobroma cacao HOM05D008143 ORTHO05D010256 1.3e-13 79.7 81 58.0
FAN03G3180 Fragaria x ananassa HOM05D008143 ORTHO05D010256 1.7e-13 79.3 64 68.8
HanXRQChr01g0020571 Helianthus annuus HOM05D008143 ORTHO05D010256 2.9e-13 78.6 69 63.8
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 3.8e-13 78.2 69 62.3
Aqoxy3G02407 Aquilegia oxysepala HOM05D008143 ORTHO05D010256 6.5e-13 77.4 95 50.5
CiPaw.13G019200 Carya illinoinensis HOM05D008143 ORTHO05D010256 1.1e-12 76.6 69 62.3
Sabra14G0139000 Salix brachista HOM05D008143 ORTHO05D010256 1.4e-12 76.3 69 60.9
ClCG05G002660 Citrullus lanatus HOM05D008143 ORTHO05D010256 3.2e-12 75.1 77 58.4
Cc02_g26140 Coffea canephora HOM05D008143 ORTHO05D010256 3.2e-12 75.1 71 62.0
MELO3C006232.2 Cucumis melo HOM05D008143 ORTHO05D010256 3.2e-12 75.1 77 58.4
Hma1.2p1_0076F.1_g039560 Hydrangea macrophylla HOM05D008143 ORTHO05D010256 3.2e-12 75.1 84 54.8
Nitab4.5_0001209g0030 Nicotiana tabacum HOM05D008143 ORTHO05D010256 5.5e-12 74.3 78 53.8
CsaV3_3G010110 Cucumis sativus L. HOM05D008143 ORTHO05D010256 7.2e-12 73.9 77 57.1
ECA248G2885 Erigeron canadensis HOM05D008143 ORTHO05D010256 7.2e-12 73.9 83 54.2
MSTRG.28120 Avicennia marina HOM05D008143 ORTHO05D010256 9.4e-12 73.6 61 65.6
Actinidia21604 Actinidia chinensis HOM05D008143 ORTHO05D010256 1.6e-11 72.8 94 46.8
Migut.N01697 Erythranthe guttata HOM05D008143 ORTHO05D010256 1.6e-11 72.8 63 61.9
Sed0022797 Sechium edule HOM05D008143 ORTHO05D010256 6.1e-11 70.9 76 53.9
Potri.014G178900 Populus trichocarpa HOM05D008143 ORTHO05D010256 1.4e-10 69.7 69 56.5
PSO017G2691 Papaver somniferum HOM05D008143 ORTHO05D010256 1.8e-10 69.3 88 45.5
TAR636G2193 Trochodendron aralioides HOM05D008143 ORTHO05D010256 3.0e-10 68.6 89 44.9
Peaxi162Scf01110g00012 Petunia axillaris HOM05D008143 ORTHO05D010256 5.1e-10 67.8 76 55.3
AUR62023336 Chenopodium quinoa HOM05D008143 ORTHO05D010256 8.8e-10 67.0 65 61.5
SGA_v2.0_scaffold4G02202 Striga asiatica HOM05D008143 ORTHO05D010256 1.5e-09 66.2 80 50.0
MD02G1236800 Malus domestica HOM05D008143 ORTHO05D010256 2.8e-08 62.0 45 68.9
Phvul.005G016300 Phaseolus vulgaris HOM05D008143 ORTHO05D010256 4.8e-08 61.2 72 48.6
Nn1g00548 Nelumbo nucifera HOM05D008143 ORTHO05D010256 6.3e-08 60.8 79 44.3
Sabra05G0099100 Salix brachista HOM05D008143 ORTHO05D010256 6.3e-08 60.8 57 61.4
Nn6g33614 Nelumbo nucifera HOM05D008143 ORTHO05D010256 3.1e-07 58.5 70 47.1
PSO170G4801 Papaver somniferum HOM05D008143 ORTHO05D010256 1.5e-06 56.2 88 39.8
DCAR_015763 Daucus carota HOM05D008143 ORTHO05D010256 5.9e-06 54.3 69 50.7


User provided reference genes

Program Settings