Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G2542 Punica granatum HOM05D008304 ORTHO05D004056 2.9e-34 148.3 90 100.0
ClCG01G001410 Citrullus lanatus HOM05D008304 ORTHO05D004056 1.7e-10 69.3 84 63.1
Sed0018210 Sechium edule HOM05D008304 ORTHO05D004056 2.9e-10 68.6 84 53.6
Haze_09200 Corylus avellana HOM05D008304 ORTHO05D004056 1.9e-09 65.9 87 51.7
QL02p027330 Quercus lobata HOM05D008304 ORTHO05D004056 3.2e-09 65.1 83 49.4
Cfa011898 Carpinus fangiana HOM05D008304 ORTHO05D004056 4.2e-09 64.7 87 51.7
CSS0003921 Camellia sinensis var. sinensis HOM05D008304 ORTHO05D004056 5.4e-09 64.3 90 48.9
Potri.001G449633 Populus trichocarpa HOM05D008304 ORTHO05D004056 5.4e-09 64.3 82 47.6
Sabra16G0303400 Salix brachista HOM05D008304 ORTHO05D004056 7.1e-09 63.9 82 48.8
Actinidia22217 Actinidia chinensis HOM05D008304 ORTHO05D004056 2.1e-08 62.4 84 50.0
Dinv12896 Davidia involucrata HOM05D008304 ORTHO05D004056 2.1e-08 62.4 82 50.0
GSVIVG01019681001 Vitis vinifera HOM05D008304 ORTHO05D004056 2.1e-08 62.4 86 47.7
CiPaw.11G110100 Carya illinoinensis HOM05D008304 ORTHO05D004056 4.6e-08 61.2 88 50.0
Manes.01G055200 Manihot esculenta HOM05D008304 ORTHO05D004056 6.0e-08 60.8 84 48.8
Nitab4.5_0002520g0050 Nicotiana tabacum HOM05D008304 ORTHO05D004056 7.8e-08 60.5 89 41.6
vmacro11488 Vaccinium macrocarpon HOM05D008304 ORTHO05D004056 1.3e-07 59.7 92 51.1
Dinv18759 Davidia involucrata HOM05D008304 ORTHO05D004056 1.7e-07 59.3 100 46.0
Oeu042857.1 Olea europaea HOM05D008304 ORTHO05D004056 1.7e-07 59.3 82 47.6
Oeu015753.1 Olea europaea HOM05D008304 ORTHO05D004056 2.3e-07 58.9 82 47.6
Peaxi162Scf00074g00131 Petunia axillaris HOM05D008304 ORTHO05D004056 2.3e-07 58.9 83 50.6
TAR629G3464 Trochodendron aralioides HOM05D008304 ORTHO05D004056 2.3e-07 58.9 83 50.6
MBI04_g22063_MAGBIO Magnolia biondii HOM05D008304 ORTHO05D004056 3.0e-07 58.5 83 47.0
Sabra11G0136700 Salix brachista HOM05D008304 ORTHO05D004056 8.7e-07 57.0 82 45.1
Sabra11G0148600 Salix brachista HOM05D008304 ORTHO05D004056 8.7e-07 57.0 82 45.1
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 1.1e-06 56.6 84 46.4
Gorai.008G260200 Gossypium raimondii HOM05D008304 ORTHO05D004056 1.5e-06 56.2 82 48.8
Cpa.g.sc37.98 Carica papaya HOM05D008304 ORTHO05D004056 1.9e-06 55.8 83 44.6
Gohir.A12G241800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 2.5e-06 55.5 82 48.8
CDE04G3503 Ceratophyllum demersum HOM05D008304 ORTHO05D004056 3.3e-06 55.1 82 48.8
CDE08G1618 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 3.3e-06 55.1 82 43.9
Gohir.D12G243000 Gossypium hirsutum HOM05D008304 ORTHO05D004056 4.3e-06 54.7 83 47.0
DCAR_013006 Daucus carota HOM05D005953 ORTHO05D004056 7.3e-06 53.9 46 56.5


User provided reference genes

Program Settings