Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G2475 Punica granatum HOM05D006477 ORTHO05D008311 4.5e-43 177.6 91 100.0
Eucgr.E04248 Eucalyptus grandis HOM05D006477 ORTHO05D008311 3.1e-36 154.8 91 85.7
MELO3C020371.2 Cucumis melo HOM05D006477 ORTHO05D008311 4.0e-36 154.5 91 83.5
Cc02_g26330 Coffea canephora HOM05D006477 ORTHO05D008311 1.2e-35 152.9 91 84.6
Cfa003675 Carpinus fangiana HOM05D006477 ORTHO05D008311 4.5e-35 151.0 91 82.4
CSS0043287 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 5.8e-35 150.6 91 80.2
MBI04_g32195_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 5.8e-35 150.6 91 81.3
CSS0025225 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 7.6e-35 150.2 91 80.2
Haze_15813 Corylus avellana HOM05D006477 ORTHO05D008311 9.9e-35 149.8 91 81.3
AUR62007820 Chenopodium quinoa HOM05D006477 ORTHO05D008311 1.3e-34 149.4 91 80.2
Nitab4.5_0004594g0090 Nicotiana tabacum HOM05D006477 ORTHO05D008311 1.3e-34 149.4 90 81.1
QL05p054895 Quercus lobata HOM05D006477 ORTHO05D008311 1.3e-34 149.4 90 81.1
QL05p056339 Quercus lobata HOM05D006477 ORTHO05D008311 1.3e-34 149.4 90 81.1
ClCG06G008130 Citrullus lanatus HOM05D006477 ORTHO05D008311 1.7e-34 149.1 91 78.0
EL10Ac6g14607 Beta vulgaris HOM05D006477 ORTHO05D008311 2.2e-34 148.7 91 79.1
Rhsim07G0044200 Rhododendron simsii HOM05D006477 ORTHO05D008311 2.2e-34 148.7 91 79.1
FvH4_7g07070 Fragaria vesca HOM05D006477 ORTHO05D008311 2.9e-34 148.3 89 80.9
HanXRQChr15g0495711 Helianthus annuus HOM05D006477 ORTHO05D008311 3.8e-34 147.9 91 79.1
HanXRQChr16g0522681 Helianthus annuus HOM05D006477 ORTHO05D008311 3.8e-34 147.9 91 79.1
Rhsim07G0044700 Rhododendron simsii HOM05D006477 ORTHO05D008311 3.8e-34 147.9 91 78.0
FAN10G2338 Fragaria x ananassa HOM05D006477 ORTHO05D008311 4.9e-34 147.5 89 80.9
Hma1.2p1_0915F.1_g236330 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 8.4e-34 146.7 91 80.2
Hma1.2p1_2755F.1_g327960 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 1.1e-33 146.4 91 79.1
Migut.J00830 Erythranthe guttata HOM05D006477 ORTHO05D008311 1.4e-33 146.0 91 76.9
Prupe.2G097300 Prunus persica HOM05D006477 ORTHO05D008311 1.4e-33 146.0 91 78.0
MD07G1076600 Malus domestica HOM05D006477 ORTHO05D008311 2.4e-33 145.2 91 76.9
TWI59G0878 Tripterygium wilfordii HOM05D006477 ORTHO05D008311 3.2e-33 144.8 89 77.5
vmacro13578 Vaccinium macrocarpon HOM05D006477 ORTHO05D008311 4.2e-33 144.4 91 76.9
ECA234G3546 Erigeron canadensis HOM05D006477 ORTHO05D008311 7.1e-33 143.7 91 76.9
Lsat_1_v5_gn_4_40501 Lactuca sativa HOM05D006477 ORTHO05D008311 7.1e-33 143.7 91 76.9
RcHm_v2.0_Chr1g0337021 Rosa chinensis HOM05D006477 ORTHO05D008311 9.3e-33 143.3 91 76.9
Duzib128G0861 Durio zibethinus HOM05D006477 ORTHO05D008311 1.2e-32 142.9 91 78.0
Rhsim07G0124700 Rhododendron simsii HOM05D006477 ORTHO05D008311 1.2e-32 142.9 91 75.8
Manes.06G016700 Manihot esculenta HOM05D006477 ORTHO05D008311 1.6e-32 142.5 90 76.7
Manes.06G016750 Manihot esculenta HOM05D006477 ORTHO05D008311 1.6e-32 142.5 90 76.7
COL.COLO4_15215 Corchorus olitorius HOM05D006477 ORTHO05D008311 3.5e-32 141.4 91 78.0
FAN06G1803 Fragaria x ananassa HOM05D006477 ORTHO05D008311 3.5e-32 141.4 85 80.0
MD02G1240300 Malus domestica HOM05D006477 ORTHO05D008311 3.5e-32 141.4 91 75.8
Nitab4.5_0004800g0020 Nicotiana tabacum HOM05D006477 ORTHO05D008311 3.5e-32 141.4 90 77.8
FAN03G3069 Fragaria x ananassa HOM05D006477 ORTHO05D029725 6.0e-32 140.6 85 78.8
SalBow6G6803 Salvia bowleyana HOM05D006477 ORTHO05D008311 6.0e-32 140.6 88 76.1
GSVIVG01001179001 Vitis vinifera HOM05D006477 ORTHO05D008311 6.0e-32 140.6 91 76.9
ECA234G1029 Erigeron canadensis HOM05D006477 ORTHO05D008311 7.9e-32 140.2 91 75.8
Actinidia05816 Actinidia chinensis HOM05D006477 ORTHO05D008311 1.0e-31 139.8 89 75.3
Gohir.A12G270700 Gossypium hirsutum HOM05D006477 ORTHO05D008311 1.0e-31 139.8 91 74.7
Gohir.D12G271100 Gossypium hirsutum HOM05D006477 ORTHO05D008311 1.0e-31 139.8 91 74.7
Gorai.008G291500 Gossypium raimondii HOM05D006477 ORTHO05D008311 1.0e-31 139.8 91 74.7
MBI04_g32196_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 1.0e-31 139.8 89 75.3
COL.COLO4_37808 Corchorus olitorius HOM05D006477 ORTHO05D008311 1.8e-31 139.0 91 76.9
SGA_v2.0_scaffold120G32938 Striga asiatica HOM05D006477 ORTHO05D008311 1.8e-31 139.0 88 75.0
Thecc.07G155600 Theobroma cacao HOM05D006477 ORTHO05D008311 1.8e-31 139.0 91 76.9
CiPaw.03G039600 Carya illinoinensis HOM05D006477 ORTHO05D008311 3.0e-31 138.3 86 79.1
Actinidia31748 Actinidia chinensis HOM05D006477 ORTHO05D008311 3.9e-31 137.9 89 75.3
HanXRQChr17g0567251 Helianthus annuus HOM05D006477 ORTHO05D008311 1.1e-30 136.3 92 75.0
arahy.Tifrunner.gnm1.ann1.2E1B03 Arachis hypogaea HOM05D006477 ORTHO05D008311 1.9e-30 135.6 90 74.4
arahy.Tifrunner.gnm1.ann1.B2599V Arachis hypogaea HOM05D006477 ORTHO05D008311 1.9e-30 135.6 90 74.4
CAN.G700.29 Capsicum annuum HOM05D006477 ORTHO05D008311 1.9e-30 135.6 86 74.4
Potri.005G094100 Populus trichocarpa HOM05D006477 ORTHO05D008311 1.9e-30 135.6 86 75.6
PGSC0003DMG400001789 Solanum tuberosum HOM05D006477 ORTHO05D008311 1.9e-30 135.6 86 76.7
Solyc01g081120.2 Solanum lycopersicum HOM05D006477 ORTHO05D008311 3.3e-30 134.8 86 76.7
Sopen01g032730 Solanum pennellii HOM05D006477 ORTHO05D008311 3.3e-30 134.8 86 76.7
TPR.G24136 Trifolium pratense HOM05D006477 ORTHO05D008311 3.3e-30 134.8 86 74.4
Lj1g0022259 Lotus japonicus HOM05D006477 ORTHO05D008311 9.6e-30 133.3 90 71.1
ATR0829G122 Amborella trichopoda HOM05D006477 ORTHO05D008311 1.6e-29 132.5 91 70.3
QL05p056259 Quercus lobata HOM05D006477 ORTHO05D008311 1.6e-29 132.5 82 79.3
TPR.G19239 Trifolium pratense HOM05D006477 ORTHO05D008311 1.6e-29 132.5 86 72.1
Aqoxy7G00962 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 2.1e-29 132.1 89 73.0
Ca_18942_v3 Cicer arietinum L. HOM05D006477 ORTHO05D008311 2.8e-29 131.7 90 72.2
HPP92_026480 Vanilla planifolia HOM05D006477 ORTHO05D008311 2.8e-29 131.7 86 72.1
Lalb_Chr25g0285311 Lupinus albus HOM05D006477 ORTHO05D008311 8.2e-29 130.2 88 71.6
Phvul.010G094300 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 1.4e-28 129.4 83 77.1
QL03p061357 Quercus lobata HOM05D006477 ORTHO05D008311 5.3e-28 127.5 86 72.1
Aqoxy6G02884 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.2e-27 126.3 89 68.5
Medtr4g078485 Medicago truncatula HOM05D006477 ORTHO05D008311 1.2e-27 126.3 82 75.6
Sabra05G0077900 Salix brachista HOM05D006477 ORTHO05D008311 7.6e-27 123.6 82 73.2
Glyma.06G291500 Glycine max HOM05D006477 ORTHO05D008311 1.3e-26 122.9 89 68.5
Glyma.12G115400 Glycine max HOM05D006477 ORTHO05D008311 1.3e-26 122.9 83 71.1
CsaV3_2G011040 Cucumis sativus L. HOM05D006477 ORTHO05D008311 2.9e-26 121.7 74 79.7
Phvul.011G119800 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 2.9e-26 121.7 81 71.6
Aqoxy7G00965 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 3.8e-26 121.3 83 72.3
Ciclev10023972m.g Citrus clementina HOM05D006477 ORTHO05D008311 8.4e-26 120.2 89 68.5
unitig_27.g24761 Utricularia gibba HOM05D006477 ORTHO05D008311 1.1e-25 119.8 87 65.5
SEGI_06535 Sequoiadendron giganteum HOM05D006477 ORTHO05D008311 1.9e-25 119.0 88 64.8
Cpa.g.sc53.139 Carica papaya HOM05D006477 ORTHO05D008311 3.2e-25 118.2 83 69.9
Aqoxy5G03392 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 4.2e-25 117.9 83 71.1
THA.LOC104823802 Tarenaya hassleriana HOM05D006477 ORTHO05D008311 5.5e-25 117.5 85 65.9
PSO017G7014 Papaver somniferum HOM05D006477 ORTHO05D008311 2.7e-24 115.2 73 75.3
SHI34920 Sapria himalayana HOM05D006477 ORTHO05D008311 2.7e-24 115.2 85 63.5
Zm00001eb326860 Zea mays HOM05D006477 ORTHO05D008311 3.5e-24 114.8 88 64.8
AL2G19670 Arabidopsis lyrata HOM05D006477 ORTHO05D008311 2.3e-23 112.1 84 61.9
AT1G65032 Arabidopsis thaliana HOM05D006477 ORTHO05D008311 2.3e-23 112.1 84 60.7
Sp5g22520 Schrenkiella parvula HOM05D006477 ORTHO05D008311 5.1e-23 110.9 82 62.2
Thhalv10019379m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 6.7e-23 110.5 82 62.2
BcaNung05073 Brassica carinata HOM05D006477 ORTHO05D008311 8.7e-23 110.2 82 61.0
Atru.chr3.3240 Acer truncatum HOM05D006477 ORTHO05D008311 1.5e-22 109.4 89 64.0
A07p34050 Brassica napus HOM05D006477 ORTHO05D008311 1.5e-22 109.4 82 59.8
C06p42740 Brassica napus HOM05D006477 ORTHO05D008311 1.5e-22 109.4 82 59.8
C06p42790 Brassica napus HOM05D006477 ORTHO05D008311 1.5e-22 109.4 82 59.8
BolC6t39165H Brassica oleracea HOM05D006477 ORTHO05D008311 1.5e-22 109.4 82 59.8
Carub.0002s1025 Capsella rubella HOM05D006477 ORTHO05D008311 1.5e-22 109.4 84 59.5
Zm00001eb251360 Zea mays HOM05D006477 ORTHO05D008311 1.5e-22 109.4 83 61.4
Os02g0695700 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 1.9e-22 109.0 83 62.7
BraA07t31031Z Brassica rapa HOM05D006477 ORTHO05D008311 5.7e-22 107.5 82 58.5
C06p41870 Brassica napus HOM05D006477 ORTHO05D008311 9.7e-22 106.7 82 58.5
BolC6t39243H Brassica oleracea HOM05D006477 ORTHO05D008311 9.7e-22 106.7 82 58.5
Pp3c3_2840 Physcomitrium patens HOM05D006477 ORTHO05D008311 8.2e-21 103.6 87 58.6
CSS0008051 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 1.4e-20 102.8 91 59.3
Peaxi162Scf00592g00428 Petunia axillaris HOM05D000001 ORTHO05D000003 2.4e-20 102.1 65 76.9
Os04g0624900 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 2.0e-19 99.0 79 59.5
Mapoly0009s0212 Marchantia polymorpha HOM05D006477 ORTHO05D008311 2.2e-18 95.5 86 55.8
DCAR_024347 Daucus carota HOM05D006477 ORTHO05D008311 2.9e-18 95.1 60 76.7
Sed0027346 Sechium edule HOM05D006477 ORTHO05D008311 6.5e-18 94.0 63 76.2
Thhalv10019610m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 1.2e-16 89.7 68 61.8
BcaC08g46243 Brassica carinata HOM05D006477 ORTHO05D008311 3.9e-15 84.7 82 51.2
MBI16_g31701_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 5.7e-14 80.9 60 70.0
Psat0s466g0120 Pisum sativum HOM05D006477 ORTHO05D008311 1.7e-13 79.3 60 65.0
Psat7g168960 Pisum sativum HOM05D006477 ORTHO05D008311 4.8e-13 77.8 60 63.3
BcaB03g15190 Brassica carinata HOM05D006477 ORTHO05D008311 6.3e-13 77.4 82 48.8
arahy.Tifrunner.gnm1.ann1.HM6XW1 Arachis hypogaea HOM05D006477 ORTHO05D008311 8.2e-13 77.0 70 58.6
Sc21g0001600 Simmondsia chinensis HOM05D006477 ORTHO05D008311 4.1e-12 74.7 49 69.4
Rhsim13G0110700 Rhododendron simsii HOM05D006477 ORTHO05D008311 5.3e-12 74.3 81 50.6
SGA_v2.0_scaffold195G40833 Striga asiatica HOM05D006477 ORTHO05D404429 1.3e-10 69.7 60 58.3
PSO017G6472 Papaver somniferum HOM05D006477 ORTHO05D008311 7.2e-09 63.9 48 64.6
PSO017G6604 Papaver somniferum HOM05D006477 ORTHO05D008311 7.2e-09 63.9 48 64.6


User provided reference genes

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