Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 4.5e-191 671.0 320 100.0
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 1.2e-127 460.3 322 68.6
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 6.6e-126 454.5 308 68.2
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 4.3e-125 451.8 310 68.4
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 5.6e-125 451.4 320 67.8
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 8.1e-124 447.6 321 66.4
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 1.4e-123 446.8 302 68.2
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 9.0e-123 444.1 302 69.2
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 2.0e-122 443.0 310 68.1
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 1.7e-121 439.9 300 67.7
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 1.7e-121 439.9 300 67.7
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 6.4e-121 438.0 296 69.6
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 1.2e-119 433.7 323 64.7
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 2.7e-119 432.6 300 67.7
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 4.6e-119 431.8 296 67.6
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 7.9e-119 431.0 300 68.0
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 7.9e-119 431.0 299 68.2
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 7.9e-119 431.0 290 70.3
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 3.0e-118 429.1 305 65.6
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 4.8e-116 421.8 297 66.7
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 6.2e-116 421.4 302 65.9
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 8.1e-116 421.0 300 64.0
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 1.1e-115 420.6 321 62.3
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 5.3e-115 418.3 332 61.7
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 9.0e-115 417.5 299 64.5
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 4.5e-114 415.2 303 64.7
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 9.9e-114 414.1 290 64.5
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 2.2e-113 412.9 297 66.0
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 2.2e-113 412.9 301 65.8
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 2.9e-113 412.5 296 65.5
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 3.8e-113 412.1 301 64.8
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 1.1e-112 410.6 309 61.5
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 3.2e-112 409.1 304 63.2
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 4.2e-112 408.7 321 60.4
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 9.3e-112 407.5 318 62.9
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 2.7e-111 406.0 298 63.8
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 2.7e-111 406.0 303 62.0
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 3.5e-111 405.6 310 63.5
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 6.0e-111 404.8 299 62.5
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 1.0e-110 404.1 314 61.1
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 1.3e-110 403.7 299 63.9
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 2.3e-110 402.9 300 62.3
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 3.0e-110 402.5 301 62.1
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 6.7e-110 401.4 299 64.2
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 8.7e-110 401.0 297 62.0
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 1.5e-109 400.2 299 64.2
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 1.9e-109 399.8 288 64.6
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 2.5e-109 399.4 312 63.1
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 3.3e-109 399.1 313 62.0
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 5.6e-109 398.3 304 62.8
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 7.4e-109 397.9 296 61.8
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 2.1e-108 396.4 302 61.3
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 2.1e-108 396.4 288 63.9
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 3.7e-108 395.6 311 61.1
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 8.1e-108 394.4 305 61.3
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 1.4e-107 393.7 313 59.7
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 1.4e-107 393.7 290 64.5
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 1.2e-106 390.6 311 60.1
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 1.5e-106 390.2 303 62.4
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 5.8e-106 388.3 315 59.4
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 7.6e-106 387.9 310 60.3
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 2.2e-105 386.3 322 57.8
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 2.9e-105 386.0 295 62.4
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 2.9e-105 386.0 262 68.7
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 6.5e-105 384.8 303 59.4
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 8.4e-105 384.4 295 61.7
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 8.4e-105 384.4 295 61.7
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 1.9e-104 383.3 293 60.8
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 2.5e-104 382.9 295 62.0
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 4.2e-104 382.1 301 60.1
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 3.5e-103 379.0 426 47.9
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 7.9e-103 377.9 295 61.4
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.0e-102 377.5 336 55.7
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 1.8e-102 376.7 313 59.4
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 3.0e-102 375.9 300 59.7
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 5.1e-102 375.2 295 60.3
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 5.1e-102 375.2 295 60.3
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 5.1e-102 375.2 333 57.1
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 6.7e-102 374.8 295 59.7
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 1.1e-101 374.0 295 60.7
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 2.5e-101 372.9 295 60.7
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 1.8e-99 366.7 299 56.5
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 6.9e-99 364.8 328 55.8
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 1.2e-98 364.0 314 56.7
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 2.0e-98 363.2 296 58.8
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 7.6e-98 361.3 288 60.8
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 2.2e-97 359.8 302 57.9
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 2.2e-97 359.8 303 59.1
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 4.2e-96 355.5 289 58.8
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 5.5e-96 355.1 300 58.3
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 2.3e-94 349.7 302 56.3
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 1.1e-93 347.4 451 43.7
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 5.7e-93 345.1 301 55.1
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 1.3e-92 344.0 289 58.1
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 4.6e-87 325.5 311 53.4
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 4.4e-85 318.9 309 50.5
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 3.7e-84 315.8 297 53.5
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 3.1e-83 312.8 303 50.8
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 3.8e-81 305.8 301 47.5
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 1.3e-73 280.8 299 45.8
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 3.2e-72 276.2 224 59.8
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 4.5e-66 255.8 298 41.9
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 5.0e-65 252.3 180 63.3
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 1.3e-57 227.6 150 68.7
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 6.1e-55 218.8 294 41.2
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.7e-52 210.7 264 39.4
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 4.3e-40 169.5 119 68.1
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 6.4e-36 155.6 89 71.9
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 3.2e-35 153.3 129 56.6
Cre09.g398150 Chlamydomonas reinhardtii HOM05D007134 ORTHO05D009004 7.3e-08 62.4 152 28.9
Nn6g33134 Nelumbo nucifera HOM05D007134 ORTHO05D009004 3.6e-07 60.1 62 50.0


User provided reference genes

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