Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 0.0e+00 1117.8 607 100.0
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 2.4e-140 503.4 635 53.2
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 1.7e-138 497.3 640 50.9
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 1.4e-137 494.2 534 55.8
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 1.5e-134 484.2 641 50.4
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 1.9e-134 483.8 633 49.8
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 2.1e-133 480.3 638 49.1
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 2.6e-131 473.4 645 48.5
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 2.9e-130 469.9 637 48.8
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 4.2e-129 466.1 674 46.3
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 7.1e-129 465.3 640 48.4
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 2.1e-128 463.8 652 48.2
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 1.6e-125 454.1 642 46.0
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 6.2e-125 452.2 631 47.2
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 1.4e-124 451.1 636 46.2
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 1.4e-124 451.1 662 46.1
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 1.8e-124 450.7 634 46.8
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 2.0e-123 447.2 644 45.5
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 4.5e-123 446.0 632 48.7
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 2.9e-122 443.4 638 47.2
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 2.9e-122 443.4 691 46.0
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 9.3e-121 438.3 642 44.9
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.3e-119 434.5 641 46.8
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 1.3e-119 434.5 641 46.8
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 1.1e-116 424.9 651 44.2
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 1.2e-115 421.4 618 47.7
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 5.9e-115 419.1 649 45.1
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 5.9e-115 419.1 635 45.4
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 2.2e-114 417.2 636 45.3
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 2.2e-114 417.2 639 45.5
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 6.5e-114 415.6 640 45.6
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 8.5e-114 415.2 651 44.4
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 3.6e-112 409.8 654 44.6
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 7.9e-112 408.7 645 44.5
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 3.9e-111 406.4 628 45.9
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 4.3e-110 402.9 643 43.2
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 2.2e-109 400.6 638 44.2
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 6.3e-109 399.1 651 43.8
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 6.3e-109 399.1 654 44.6
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 6.3e-109 399.1 654 43.6
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 1.1e-108 398.3 634 43.8
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 1.8e-108 397.5 649 44.2
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 5.3e-108 396.0 654 44.0
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 4.5e-107 392.9 642 43.9
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 5.9e-107 392.5 653 43.3
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 2.2e-106 390.6 646 45.5
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 4.2e-105 386.3 659 44.0
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 5.5e-105 386.0 646 44.3
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 1.4e-103 381.3 637 44.3
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 2.3e-103 380.6 659 42.0
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 5.1e-103 379.4 650 42.3
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 5.7e-102 375.9 648 43.2
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 1.8e-100 370.9 644 42.9
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 4.1e-100 369.8 644 42.2
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 4.1e-100 369.8 640 42.7
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 9.1e-100 368.6 658 41.6
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 7.4e-94 349.0 636 41.2
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 2.2e-93 347.4 659 41.0
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 1.1e-92 345.1 369 55.0
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 2.4e-92 344.0 492 46.3
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 5.3e-92 342.8 651 42.5
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 5.9e-91 339.3 660 40.8
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 1.0e-90 338.6 651 41.3
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 1.7e-90 337.8 653 40.4
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 1.7e-90 337.8 654 40.5
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 2.9e-90 337.0 648 40.4
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 1.1e-89 335.1 633 40.4
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 5.5e-89 332.8 529 43.9
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 7.2e-89 332.4 595 42.7
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 2.7e-88 330.5 635 40.6
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 2.0e-86 324.3 704 39.5
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 3.4e-86 323.6 618 41.1
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 2.8e-85 320.5 696 38.1
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 2.4e-84 317.4 654 39.8
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 5.0e-82 309.7 637 38.0
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 5.0e-82 309.7 635 39.4
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 1.9e-81 307.8 650 40.2
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 3.6e-80 303.5 378 52.1
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 1.8e-79 301.2 660 40.0
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 2.3e-79 300.8 660 40.9
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 4.0e-79 300.1 654 37.0
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 7.5e-78 295.8 651 38.4
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 1.3e-77 295.0 600 40.0
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 3.7e-77 293.5 679 38.1
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 1.6e-75 288.1 640 39.7
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 1.6e-75 288.1 631 40.6
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 4.5e-75 286.6 641 40.4
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 2.3e-74 284.3 637 39.4
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 2.9e-74 283.9 629 39.0
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 5.0e-74 283.1 641 39.9
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 1.5e-73 281.6 643 39.3
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 1.5e-73 281.6 480 41.7
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 2.5e-73 280.8 636 38.7
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 7.2e-73 279.3 646 38.5
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 9.5e-73 278.9 636 38.7
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 1.2e-72 278.5 625 40.3
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 3.0e-71 273.9 668 37.1
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 5.2e-71 273.1 655 38.2
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 8.9e-71 272.3 633 37.4
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 2.0e-70 271.2 637 39.1
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 4.4e-70 270.0 638 36.1
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 3.7e-69 266.9 640 38.8
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 2.4e-68 264.2 631 39.0
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 6.6e-66 256.1 489 40.9
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 1.1e-65 255.4 398 45.2
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 4.3e-65 253.4 672 35.7
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 2.8e-64 250.8 543 37.2
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 2.8e-64 250.8 636 37.4
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 3.6e-64 250.4 646 36.4
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 4.0e-63 246.9 642 35.7
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 5.2e-63 246.5 512 39.5
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 6.4e-61 239.6 474 40.3
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.1e-60 238.8 651 38.7
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 7.0e-60 236.1 720 34.6
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 8.6e-58 229.2 402 43.3
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 1.8e-55 221.5 776 31.8
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 7.1e-52 209.5 364 43.1
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 4.7e-48 196.8 669 33.5
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 3.7e-45 187.2 363 40.2
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 6.0e-43 179.9 469 37.5
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 6.0e-43 179.9 161 64.6
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 3.0e-42 177.6 145 67.6
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 8.1e-40 169.5 611 30.6
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 8.9e-39 166.0 659 32.0
Cpa.g.sc81.1 Carica papaya HOM05D005409 ORTHO05D006456 3.4e-38 164.1 200 53.0
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 1.7e-34 151.8 732 32.0
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 1.9e-33 148.3 252 46.4
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 9.9e-30 136.0 655 30.1
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 2.8e-16 91.3 108 51.9
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 2.8e-16 91.3 398 30.4
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 2.4e-15 88.2 120 47.5
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 5.3e-15 87.0 726 25.2
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 1.5e-14 85.5 120 50.8
Atru.chr6.3115 Acer truncatum HOM05D005409 ORTHO05D006456 5.8e-14 83.6 197 36.0
Haze_06667 Corylus avellana HOM05D005409 ORTHO05D006456 7.6e-14 83.2 190 34.7
QL05p012359 Quercus lobata HOM05D005409 ORTHO05D006456 2.5e-12 78.2 115 47.8
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 1.9e-09 68.6 116 42.2
Actinidia26960 Actinidia chinensis HOM05D005409 ORTHO05D006456 7.6e-06 56.6 90 47.8


User provided reference genes

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