Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G2392 Punica granatum HOM05D007507 ORTHO05D009420 2.4e-72 275.4 140 100.0
MD10G1289800 Malus domestica HOM05D007507 ORTHO05D009420 7.4e-29 131.0 134 59.0
MD05G1310700 Malus domestica HOM05D007507 ORTHO05D009420 1.6e-28 129.8 139 58.3
Prupe.4G051900 Prunus persica HOM05D007507 ORTHO05D009420 6.2e-28 127.9 134 56.0
RcHm_v2.0_Chr5g0009091 Rosa chinensis HOM05D007507 ORTHO05D009420 2.2e-25 119.4 141 51.1
Duzib192G0611 Durio zibethinus HOM05D007507 ORTHO05D009420 6.4e-25 117.9 139 48.9
Eucgr.E03247 Eucalyptus grandis HOM05D007507 ORTHO05D009420 8.4e-25 117.5 144 50.7
FvH4_3g08680 Fragaria vesca HOM05D007507 ORTHO05D009420 1.1e-24 117.1 141 51.1
Lalb_Chr20g0121601 Lupinus albus HOM05D007507 ORTHO05D009420 1.4e-24 116.7 135 51.1
Thecc.06G181600 Theobroma cacao HOM05D007507 ORTHO05D009420 2.4e-24 115.9 142 47.2
TAR626G1744 Trochodendron aralioides HOM05D007507 ORTHO05D009420 7.1e-24 114.4 134 51.5
FAN21G1585 Fragaria x ananassa HOM05D007507 ORTHO05D009420 9.3e-24 114.0 141 50.4
FAN11G0818 Fragaria x ananassa HOM05D007507 ORTHO05D009420 1.6e-23 113.2 142 50.7
Potri.011G057400 Populus trichocarpa HOM05D007507 ORTHO05D009420 6.0e-23 111.3 144 52.1
Potri.004G048201 Populus trichocarpa HOM05D007507 ORTHO05D009420 7.9e-23 110.9 144 51.4
Glyma.13G175400 Glycine max HOM05D007507 ORTHO05D009420 1.8e-22 109.8 141 46.8
Gohir.D05G162100 Gossypium hirsutum HOM05D007507 ORTHO05D009420 1.8e-22 109.8 144 47.9
QL05p042078 Quercus lobata HOM05D007507 ORTHO05D009420 3.0e-22 109.0 140 48.6
Phvul.002G232000 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 3.9e-22 108.6 129 48.8
Gohir.A05G159400 Gossypium hirsutum HOM05D007507 ORTHO05D009420 5.1e-22 108.2 144 47.2
VMungo0251G0526 Vigna mungo HOM05D007507 ORTHO05D009420 5.1e-22 108.2 139 48.2
CANSAT35G2017 Cannabis sativa HOM05D007507 ORTHO05D009420 6.7e-22 107.8 139 49.6
Nn1g04226 Nelumbo nucifera HOM05D007507 ORTHO05D009420 6.7e-22 107.8 129 48.8
GSVIVG01021107001 Vitis vinifera HOM05D007507 ORTHO05D009420 6.7e-22 107.8 140 50.0
Duzib235G0685 Durio zibethinus HOM05D007507 ORTHO05D009420 8.7e-22 107.5 141 44.7
Glyma.07G201000 Glycine max HOM05D007507 ORTHO05D009420 1.1e-21 107.1 141 46.8
Gorai.009G167100 Gossypium raimondii HOM05D007507 ORTHO05D009420 1.1e-21 107.1 139 48.2
Sabra04G0030100 Salix brachista HOM05D007507 ORTHO05D009420 4.3e-21 105.1 139 51.1
PGSC0003DMG400031763 Solanum tuberosum HOM05D007507 ORTHO05D009420 4.3e-21 105.1 132 47.7
Manes.16G031300 Manihot esculenta HOM05D007507 ORTHO05D009420 5.6e-21 104.8 141 46.8
Actinidia16570 Actinidia chinensis HOM05D007507 ORTHO05D009420 1.3e-20 103.6 143 43.4
Glyma.15G077500 Glycine max HOM05D007507 ORTHO05D009420 1.3e-20 103.6 135 47.4
Sabra11G0039300 Salix brachista HOM05D007507 ORTHO05D009420 1.6e-20 103.2 144 48.6
Medtr2g014380 Medicago truncatula HOM05D007507 ORTHO05D009420 2.8e-20 102.4 139 46.0
TPR.G39426 Trifolium pratense HOM05D007507 ORTHO05D009420 8.1e-20 100.9 143 44.8
Actinidia05654 Actinidia chinensis HOM05D007507 ORTHO05D009420 1.1e-19 100.5 142 43.0
Glyma.13G236200 Glycine max HOM05D007507 ORTHO05D009420 2.4e-19 99.4 123 51.2
Manes.17G048900 Manihot esculenta HOM05D007507 ORTHO05D009420 3.1e-19 99.0 135 48.9
Dinv17350 Davidia involucrata HOM05D007507 ORTHO05D009420 4.0e-19 98.6 137 46.0
Phvul.006G182800 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 5.3e-19 98.2 122 51.6
Cpa.g.sc27.9 Carica papaya HOM05D007507 ORTHO05D009420 6.9e-19 97.8 133 45.9
CiPaw.10G052300 Carya illinoinensis HOM05D007507 ORTHO05D009420 6.9e-19 97.8 142 47.2
CSS0001598 Camellia sinensis var. sinensis HOM05D007507 ORTHO05D009420 9.0e-19 97.4 141 44.0
Dinv40597 Davidia involucrata HOM05D007507 ORTHO05D009420 1.2e-18 97.1 145 45.5
Lj4g0010126 Lotus japonicus HOM05D007507 ORTHO05D009420 1.5e-18 96.7 141 44.0
TPR.G19926 Trifolium pratense HOM05D007507 ORTHO05D009420 1.5e-18 96.7 138 47.1
Psat7g115600 Pisum sativum HOM05D007507 ORTHO05D009420 3.4e-18 95.5 141 48.2
arahy.Tifrunner.gnm1.ann1.IERL18 Arachis hypogaea HOM05D007507 ORTHO05D009420 7.6e-18 94.4 143 44.8
Lsat_1_v5_gn_7_22681 Lactuca sativa HOM05D007507 ORTHO05D009420 1.0e-17 94.0 138 44.9
arahy.Tifrunner.gnm1.ann1.UCBT0G Arachis hypogaea HOM05D007507 ORTHO05D009420 1.3e-17 93.6 143 44.1
HanXRQChr04g0113131 Helianthus annuus HOM05D007507 ORTHO05D009420 1.3e-17 93.6 143 44.1
Medtr4g088390 Medicago truncatula HOM05D007507 ORTHO05D009420 2.9e-17 92.4 141 46.8
Ciclev10016932m.g Citrus clementina HOM05D007507 ORTHO05D009420 6.5e-17 91.3 148 43.9
Cc02_g13780 Coffea canephora HOM05D007507 ORTHO05D009420 1.9e-16 89.7 137 40.1
Sopen02g022610 Solanum pennellii HOM05D007507 ORTHO05D009420 2.5e-16 89.4 140 42.9
MBI07_g29118_MAGBIO Magnolia biondii HOM05D007507 ORTHO05D009420 4.2e-16 88.6 142 43.0
Aqoxy4G00641 Aquilegia oxysepala HOM05D007507 ORTHO05D009420 9.3e-16 87.4 128 47.7
Solyc02g077720.4 Solanum lycopersicum HOM05D007507 ORTHO05D009420 1.6e-15 86.7 140 40.7
arahy.Tifrunner.gnm1.ann1.XNU6AG Arachis hypogaea HOM05D007507 ORTHO05D009420 2.1e-15 86.3 135 43.7
PSO675G6999 Papaver somniferum HOM05D007507 ORTHO05D009420 2.1e-15 86.3 135 42.2
CsaV3_6G050370 Cucumis sativus L. HOM05D007507 ORTHO05D009420 3.5e-15 85.5 138 41.3
arahy.Tifrunner.gnm1.ann1.26E61A Arachis hypogaea HOM05D007507 ORTHO05D009420 1.0e-14 84.0 133 43.6
Atru.chr10.1803 Acer truncatum HOM05D007507 ORTHO05D009420 1.8e-14 83.2 150 41.3
TWI38G1903 Tripterygium wilfordii HOM05D007507 ORTHO05D009420 1.8e-14 83.2 132 45.5
Gohir.D09G073200 Gossypium hirsutum HOM05D007507 ORTHO05D009420 2.3e-14 82.8 139 43.2
Gorai.006G088200 Gossypium raimondii HOM05D007507 ORTHO05D009420 2.3e-14 82.8 139 43.2
Atru.chr10.1804 Acer truncatum HOM05D007507 ORTHO05D009420 3.0e-14 82.4 152 40.8
Gohir.A09G073500 Gossypium hirsutum HOM05D007507 ORTHO05D009420 3.9e-14 82.0 139 42.4
VMungo0540G0304 Vigna mungo HOM05D007507 ORTHO05D009420 5.1e-14 81.6 135 43.7
ClCG01G023220 Citrullus lanatus HOM05D007507 ORTHO05D009420 8.7e-14 80.9 138 38.4
Migut.H01473 Erythranthe guttata HOM05D007507 ORTHO05D009420 8.7e-14 80.9 136 41.2
Hma1.2p1_0558F.1_g178550 Hydrangea macrophylla HOM05D007507 ORTHO05D009420 1.5e-13 80.1 122 45.1
Nitab4.5_0002813g0060 Nicotiana tabacum HOM05D007507 ORTHO05D009420 3.3e-13 79.0 128 43.8
DCAR_004049 Daucus carota HOM05D007507 ORTHO05D009420 7.4e-13 77.8 133 40.6
Sed0011593 Sechium edule HOM05D007507 ORTHO05D009420 6.3e-12 74.7 122 42.6
Gorai.010G158100 Gossypium raimondii HOM05D007507 ORTHO05D009420 1.8e-11 73.2 148 37.2
DCAR_008007 Daucus carota HOM05D007507 ORTHO05D009420 2.4e-11 72.8 139 40.3
MSTRG.14710 Avicennia marina HOM05D007507 ORTHO05D009420 6.9e-11 71.2 80 53.8
PSO541G3558 Papaver somniferum HOM05D007507 ORTHO05D009420 6.9e-11 71.2 85 50.6
ECA236G3296 Erigeron canadensis HOM05D007507 ORTHO05D009420 2.0e-10 69.7 91 48.4
Gohir.D06G135900 Gossypium hirsutum HOM05D007507 ORTHO05D009420 1.3e-09 67.0 147 36.1
Nitab4.5_0007893g0030 Nicotiana tabacum HOM05D007507 ORTHO05D009420 1.3e-09 67.0 128 39.1
Oeu024354.1 Olea europaea HOM05D003527 ORTHO05D004099 2.9e-09 65.9 129 37.2
SEGI_17757 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 2.9e-09 65.9 77 49.4
Oeu027697.1 Olea europaea HOM05D007507 ORTHO05D009420 3.8e-09 65.5 122 36.1
Oeu015676.1 Olea europaea HOM05D007507 ORTHO05D009420 8.5e-09 64.3 122 38.5
Migut.M01111 Erythranthe guttata HOM05D007507 ORTHO05D009420 1.1e-08 63.9 133 36.8
MELO3C007264.2 Cucumis melo HOM05D007507 ORTHO05D009420 5.5e-08 61.6 101 41.6
SalBow8G4682 Salvia bowleyana HOM05D007507 ORTHO05D009420 5.5e-08 61.6 127 36.2
Gorai.001G110200 Gossypium raimondii HOM05D003527 ORTHO05D004099 7.2e-08 61.2 115 39.1
Potri.006G084400 Populus trichocarpa HOM05D003527 ORTHO05D004099 2.1e-07 59.7 77 48.1
Haze_06387 Corylus avellana HOM05D007507 ORTHO05D009420 2.7e-07 59.3 142 35.9
Oeu064800.1 Olea europaea HOM05D007507 ORTHO05D009420 2.7e-07 59.3 99 37.4
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 2.7e-07 59.3 75 45.3
COL.COLO4_14818 Corchorus olitorius HOM05D003527 ORTHO05D004099 3.6e-07 58.9 67 50.7
Duzib093G1072 Durio zibethinus HOM05D003527 ORTHO05D004099 3.6e-07 58.9 67 52.2
Psat1g203160 Pisum sativum HOM05D007507 ORTHO05D009420 3.6e-07 58.9 104 37.5
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 4.6e-07 58.5 124 33.9
Sed0011659 Sechium edule HOM05D003527 ORTHO05D004099 4.6e-07 58.5 74 48.6
SEGI_35508 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 4.6e-07 58.5 70 50.0
MELO3C025924.2 Cucumis melo HOM05D003527 ORTHO05D004099 7.9e-07 57.8 110 39.1
FAN25G2547 Fragaria x ananassa HOM05D003527 ORTHO05D004099 1.0e-06 57.4 74 48.6
FAN16G0579 Fragaria x ananassa HOM05D003527 ORTHO05D004099 1.3e-06 57.0 74 48.6
PSO339G4025 Papaver somniferum HOM05D003527 ORTHO05D004099 1.8e-06 56.6 67 47.8
PSO384G3887 Papaver somniferum HOM05D003527 ORTHO05D004099 1.8e-06 56.6 67 47.8
CANSAT35G0216 Cannabis sativa HOM05D003527 ORTHO05D004099 2.3e-06 56.2 67 46.3
Gohir.A07G097950 Gossypium hirsutum HOM05D003527 ORTHO05D004099 2.3e-06 56.2 109 39.4
Gohir.D07G102300 Gossypium hirsutum HOM05D003527 ORTHO05D004099 2.3e-06 56.2 109 39.4
VMungo1383G0208 Vigna mungo HOM05D003527 ORTHO05D004099 2.3e-06 56.2 65 49.2
FAN21G2526 Fragaria x ananassa HOM05D003527 ORTHO05D004099 3.9e-06 55.5 74 47.3
MELO3C003124.2 Cucumis melo HOM05D003527 ORTHO05D004099 5.1e-06 55.1 70 47.1
Gohir.D11G345500 Gossypium hirsutum HOM05D003527 ORTHO05D004099 5.1e-06 55.1 68 50.0
Psat0s4138g0040 Pisum sativum HOM05D003527 ORTHO05D004099 5.1e-06 55.1 68 47.1
Thecc.05G040900 Theobroma cacao HOM05D003527 ORTHO05D004099 5.1e-06 55.1 66 48.5
TWI74G0830 Tripterygium wilfordii HOM05D003527 ORTHO05D004099 5.1e-06 55.1 68 48.5
Duzib128G0537 Durio zibethinus HOM05D003527 ORTHO05D004099 6.7e-06 54.7 67 47.8
Glyma.08G358400 Glycine max HOM05D003527 ORTHO05D004099 6.7e-06 54.7 65 46.2
Lalb_Chr03g0035091 Lupinus albus HOM05D003527 ORTHO05D004099 6.7e-06 54.7 68 47.1
MBI14_g37823_MAGBIO Magnolia biondii HOM05D003527 ORTHO05D004099 6.7e-06 54.7 67 50.7
Manes.08G081800 Manihot esculenta HOM05D003527 ORTHO05D004099 6.7e-06 54.7 64 48.4
CsaV3_4G024920 Cucumis sativus L. HOM05D003527 ORTHO05D004099 8.7e-06 54.3 70 47.1
Lj2A96T67 Lonicera japonica HOM05D003527 ORTHO05D004099 8.7e-06 54.3 70 48.6
Phvul.008G099800 Phaseolus vulgaris HOM05D003527 ORTHO05D004099 8.7e-06 54.3 65 47.7


User provided reference genes

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