Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G2321 Punica granatum HOM05D007350 ORTHO05D009323 1.5e-83 312.8 158 100.0
Eucgr.G01372 Eucalyptus grandis HOM05D007350 ORTHO05D009323 8.9e-31 137.5 163 50.9
Cpa.g.sc20.115 Carica papaya HOM05D007350 ORTHO05D009323 2.2e-29 132.9 160 50.0
Sabra04G0119700 Salix brachista HOM05D007350 ORTHO05D009323 1.1e-28 130.6 160 51.2
Potri.004G177800 Populus trichocarpa HOM05D007350 ORTHO05D009323 2.4e-28 129.4 160 49.4
Ciclev10029452m.g Citrus clementina HOM05D007350 ORTHO05D009323 3.5e-27 125.6 160 50.6
Haze_02104 Corylus avellana HOM05D007350 ORTHO05D009323 2.3e-26 122.9 169 47.3
Gohir.D02G227300 Gossypium hirsutum HOM05D007350 ORTHO05D009323 2.5e-25 119.4 150 50.0
Thecc.02G055300 Theobroma cacao HOM05D007350 ORTHO05D009323 2.5e-25 119.4 154 47.4
Gorai.005G255200 Gossypium raimondii HOM05D007350 ORTHO05D009323 3.3e-25 119.0 155 49.7
PSO063G0872 Papaver somniferum HOM05D007350 ORTHO05D009323 3.3e-25 119.0 158 47.5
Gohir.A03G205900 Gossypium hirsutum HOM05D007350 ORTHO05D009323 4.3e-25 118.6 155 49.7
GSVIVG01023973001 Vitis vinifera HOM05D007350 ORTHO05D009323 4.3e-25 118.6 157 49.0
ClCG02G003950 Citrullus lanatus HOM05D007350 ORTHO05D009323 5.6e-25 118.2 96 68.8
Prupe.8G169100 Prunus persica HOM05D007350 ORTHO05D009323 9.5e-25 117.5 160 44.4
COL.COLO4_17379 Corchorus olitorius HOM05D007350 ORTHO05D009323 2.1e-24 116.3 152 49.3
PSO782G4816 Papaver somniferum HOM05D007350 ORTHO05D009323 2.8e-24 115.9 158 47.5
Sed0025246 Sechium edule HOM05D007350 ORTHO05D009323 3.6e-24 115.5 96 64.6
CiPaw.05G085400 Carya illinoinensis HOM05D007350 ORTHO05D009323 4.7e-24 115.2 160 48.1
Lalb_Chr02g0159761 Lupinus albus HOM05D007350 ORTHO05D009323 6.2e-24 114.8 96 67.7
MBI19_g01918_MAGBIO Magnolia biondii HOM05D007350 ORTHO05D009323 1.0e-23 114.0 126 54.8
TWI79G1045 Tripterygium wilfordii HOM05D007350 ORTHO05D009323 1.0e-23 114.0 160 46.2
Nn4g24553 Nelumbo nucifera HOM05D007350 ORTHO05D009323 1.4e-23 113.6 156 47.4
Actinidia20526 Actinidia chinensis HOM05D007350 ORTHO05D009323 2.3e-23 112.8 155 47.1
MSTRG.20506 Avicennia marina HOM05D007350 ORTHO05D009323 2.3e-23 112.8 169 44.4
TPR.G2262 Trifolium pratense HOM05D007350 ORTHO05D009323 2.3e-23 112.8 119 54.6
Glyma.19G012500 Glycine max HOM05D007350 ORTHO05D009323 3.1e-23 112.5 110 58.2
Medtr6g007793 Medicago truncatula HOM05D007350 ORTHO05D009323 3.1e-23 112.5 129 51.2
Glyma.13G070400 Glycine max HOM05D007350 ORTHO05D009323 4.0e-23 112.1 110 58.2
Lj2g0024385 Lotus japonicus HOM05D007350 ORTHO05D009323 5.2e-23 111.7 119 56.3
MELO3C013337.2 Cucumis melo HOM05D007350 ORTHO05D009323 6.8e-23 111.3 96 66.7
VMungo0464G1538 Vigna mungo HOM05D007350 ORTHO05D009323 6.8e-23 111.3 105 58.1
Hma1.2p1_0032F.1_g019200 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 1.5e-22 110.2 95 64.2
Psat1g060320 Pisum sativum HOM05D007350 ORTHO05D009323 1.5e-22 110.2 107 57.0
THA.LOC104807801 Tarenaya hassleriana HOM05D007350 ORTHO05D009323 2.0e-22 109.8 151 47.0
TAR374G1157 Trochodendron aralioides HOM05D007350 ORTHO05D009323 2.0e-22 109.8 102 60.8
CsaV3_7G001160 Cucumis sativus L. HOM05D007350 ORTHO05D009323 2.6e-22 109.4 93 65.6
Phvul.004G019500 Phaseolus vulgaris HOM05D007350 ORTHO05D009323 2.6e-22 109.4 112 58.0
RcHm_v2.0_Chr6g0278901 Rosa chinensis HOM05D007350 ORTHO05D009323 3.4e-22 109.0 157 46.5
Duzib052G1005 Durio zibethinus HOM05D007350 ORTHO05D009323 5.8e-22 108.2 97 62.9
Oeu025102.1 Olea europaea HOM05D007350 ORTHO05D009323 9.8e-22 107.5 97 61.9
Manes.04G071000 Manihot esculenta HOM05D007350 ORTHO05D009323 1.3e-21 107.1 159 44.7
Rhsim03G0180300 Rhododendron simsii HOM05D007350 ORTHO05D009323 1.3e-21 107.1 159 45.9
Ca_04216_v3 Cicer arietinum L. HOM05D007350 ORTHO05D009323 1.7e-21 106.7 99 57.6
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 2.2e-21 106.3 96 58.3
Migut.B01238 Erythranthe guttata HOM05D007350 ORTHO05D009323 2.9e-21 105.9 118 51.7
QL11p052353 Quercus lobata HOM05D007350 ORTHO05D009323 2.9e-21 105.9 158 45.6
Aqoxy3G04007 Aquilegia oxysepala HOM05D007350 ORTHO05D009323 3.7e-21 105.5 154 45.5
FvH4_2g15660 Fragaria vesca HOM05D007350 ORTHO05D009323 3.7e-21 105.5 95 60.0
FAN24G2045 Fragaria x ananassa HOM05D007350 ORTHO05D009323 3.7e-21 105.5 95 60.0
Sp7g37290 Schrenkiella parvula HOM05D007350 ORTHO05D009323 3.7e-21 105.5 158 42.4
AUR62010011 Chenopodium quinoa HOM05D007350 ORTHO05D009323 4.9e-21 105.1 92 64.1
AUR62013001 Chenopodium quinoa HOM05D007350 ORTHO05D009323 4.9e-21 105.1 113 54.9
Thhalv10026464m.g Eutrema salsugineum HOM05D007350 ORTHO05D009323 4.9e-21 105.1 154 42.2
Actinidia18040 Actinidia chinensis HOM05D007350 ORTHO05D009323 6.4e-21 104.8 151 46.4
RcHm_v2.0_Chr6g0278921 Rosa chinensis HOM05D007350 ORTHO05D009323 6.4e-21 104.8 95 60.0
Sc08g0002720 Simmondsia chinensis HOM05D007350 ORTHO05D009323 6.4e-21 104.8 151 45.0
FAN27G1653 Fragaria x ananassa HOM05D007350 ORTHO05D009323 8.3e-21 104.4 95 57.9
arahy.Tifrunner.gnm1.ann1.7M0RFB Arachis hypogaea HOM05D007350 ORTHO05D009323 1.4e-20 103.6 133 53.4
MD10G1127900 Malus domestica HOM05D007350 ORTHO05D009323 1.4e-20 103.6 111 54.1
FAN15G0854 Fragaria x ananassa HOM05D007350 ORTHO05D009323 3.2e-20 102.4 93 60.2
Hund16245 Selenicereus undatus HOM05D007350 ORTHO05D009323 5.4e-20 101.7 89 62.9
Cc09_g10330 Coffea canephora HOM05D007350 ORTHO05D009323 7.0e-20 101.3 153 45.1
Carub.0007s0037 Capsella rubella HOM05D007350 ORTHO05D009323 9.2e-20 100.9 105 50.5
CDE05G3477 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 9.2e-20 100.9 102 57.8
Atru.chr5.3441 Acer truncatum HOM05D007350 ORTHO05D009323 1.6e-19 100.1 162 43.8
AT4G38490 Arabidopsis thaliana HOM05D007350 ORTHO05D009323 3.5e-19 99.0 79 60.8
CANSAT78G0569 Cannabis sativa HOM05D007350 ORTHO05D009323 3.5e-19 99.0 150 45.3
AL7G10350 Arabidopsis lyrata HOM05D007350 ORTHO05D009323 7.8e-19 97.8 79 60.8
Os09g0450200 Oryza sativa ssp. japonica HOM05D007350 ORTHO05D009323 1.3e-18 97.1 95 54.7
ATR0598G093 Amborella trichopoda HOM05D007350 ORTHO05D009323 2.3e-18 96.3 96 57.3
CARHR294210 Cardamine hirsuta HOM05D007350 ORTHO05D009323 2.3e-18 96.3 77 59.7
HanXRQChr10g0298081 Helianthus annuus HOM05D007350 ORTHO05D009323 3.9e-18 95.5 95 55.8
BcaC01g00233 Brassica carinata HOM05D007350 ORTHO05D009323 1.5e-17 93.6 77 58.4
CAN.G112.14 Capsicum annuum HOM05D007350 ORTHO05D009323 3.3e-17 92.4 79 63.3
Nitab4.5_0002598g0070 Nicotiana tabacum HOM05D007350 ORTHO05D009323 3.3e-17 92.4 160 40.6
Lsat_1_v5_gn_4_72021 Lactuca sativa HOM05D007350 ORTHO05D009323 4.3e-17 92.0 96 56.2
Solyc05g050720.4 Solanum lycopersicum HOM05D007350 ORTHO05D009323 4.3e-17 92.0 115 47.8
Sopen05g029130 Solanum pennellii HOM05D007350 ORTHO05D009323 4.3e-17 92.0 115 47.8
A08p24200 Brassica napus HOM05D007350 ORTHO05D009323 9.5e-17 90.9 88 54.5
Dinv09314 Davidia involucrata HOM05D007350 ORTHO05D009323 1.2e-16 90.5 128 41.4
BolC3t19964H Brassica oleracea HOM05D007350 ORTHO05D009323 1.6e-16 90.1 78 59.0
Nitab4.5_0005221g0020 Nicotiana tabacum HOM05D007350 ORTHO05D009323 1.6e-16 90.1 158 40.5
C03p77120 Brassica napus HOM05D007350 ORTHO05D009323 4.7e-16 88.6 78 57.7
BraA08t34374Z Brassica rapa HOM05D007350 ORTHO05D009323 6.2e-16 88.2 78 57.7
BcaC01g00225 Brassica carinata HOM05D007350 ORTHO05D009323 1.8e-15 86.7 78 56.4
SGA_v2.0_scaffold124G33608 Striga asiatica HOM05D007350 ORTHO05D009323 4.0e-15 85.5 82 58.5
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 1.2e-14 84.0 79 55.7
Atru.chr6.83 Acer truncatum HOM05D007350 ORTHO05D009323 1.5e-14 83.6 102 50.0
CDE11G0403 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 3.4e-14 82.4 64 71.9
Hma1.2p1_0032F.1_g019210 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 3.4e-14 82.4 62 74.2
ECA234G1892 Erigeron canadensis HOM05D007350 ORTHO05D009323 7.5e-14 81.3 83 59.0
CSS0005535 Camellia sinensis var. sinensis HOM05D007350 ORTHO05D009323 9.2e-12 74.3 63 60.3
RcHm_v2.0_Chr6g0278961 Rosa chinensis HOM05D007350 ORTHO05D009323 5.1e-10 68.6 60 55.0
MD10G1128000 Malus domestica HOM05D007350 ORTHO05D009323 8.6e-10 67.8 51 70.6
Pp3c6_16710 Physcomitrium patens HOM05D007350 ORTHO05D009323 3.3e-09 65.9 68 50.0
SalBow5G3345 Salvia bowleyana HOM05D007350 ORTHO05D009323 4.3e-09 65.5 54 55.6
Mapoly0060s0112 Marchantia polymorpha HOM05D007350 ORTHO05D009323 5.6e-09 65.1 99 40.4
PGSC0003DMG400006999 Solanum tuberosum HOM05D007350 ORTHO05D009323 7.3e-09 64.7 80 43.8
DCAR_004401 Daucus carota HOM05D000250 ORTHO05D000625 1.1e-07 60.8 52 53.8
HPP92_012658 Vanilla planifolia HOM05D007350 ORTHO05D009323 1.8e-07 60.1 113 36.3
SEGI_00987 Sequoiadendron giganteum HOM05D007350 ORTHO05D009323 3.1e-07 59.3 143 32.2


User provided reference genes

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