Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 8.7e-108 393.7 200 100.0
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 2.3e-39 166.4 97 79.4
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 2.5e-38 162.9 95 81.1
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 5.6e-38 161.8 96 77.1
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 5.6e-38 161.8 96 77.1
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 5.6e-38 161.8 96 77.1
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 3.6e-37 159.1 89 86.5
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 6.1e-37 158.3 95 77.9
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 1.4e-36 157.1 96 77.1
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 1.8e-36 156.8 96 78.1
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 4.0e-36 155.6 95 75.8
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 5.2e-36 155.2 94 76.6
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 5.2e-36 155.2 89 82.0
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 5.2e-36 155.2 97 76.3
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 6.8e-36 154.8 133 64.7
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 6.8e-36 154.8 97 79.4
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 8.9e-36 154.5 94 77.7
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 8.9e-36 154.5 94 77.7
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 2.0e-35 153.3 87 80.5
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 2.0e-35 153.3 94 75.5
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 2.6e-35 152.9 95 73.7
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 3.4e-35 152.5 96 75.0
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 4.4e-35 152.1 96 77.1
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 9.8e-35 151.0 93 80.6
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 1.3e-34 150.6 95 78.9
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 1.7e-34 150.2 95 74.7
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 1.7e-34 150.2 98 75.5
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 2.2e-34 149.8 88 78.4
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 2.2e-34 149.8 96 78.1
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 2.2e-34 149.8 88 81.8
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 3.7e-34 149.1 99 71.7
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 4.9e-34 148.7 96 71.9
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 4.9e-34 148.7 86 81.4
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 8.3e-34 147.9 87 79.3
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 1.1e-33 147.5 88 79.5
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 1.4e-33 147.1 96 74.0
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 1.8e-33 146.7 87 78.2
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 1.8e-33 146.7 86 80.2
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 1.8e-33 146.7 98 72.4
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 1.8e-33 146.7 96 72.9
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 2.4e-33 146.4 93 79.6
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 4.1e-33 145.6 94 72.3
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 4.1e-33 145.6 102 71.6
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 4.1e-33 145.6 102 71.6
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 5.4e-33 145.2 96 71.9
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 5.4e-33 145.2 93 77.4
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 5.4e-33 145.2 94 75.5
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 5.4e-33 145.2 82 82.9
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 7.0e-33 144.8 97 72.2
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 9.2e-33 144.4 88 75.0
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 9.2e-33 144.4 86 77.9
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 9.2e-33 144.4 86 77.9
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 1.2e-32 144.1 86 79.1
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 1.2e-32 144.1 86 77.9
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 1.6e-32 143.7 93 78.5
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 1.6e-32 143.7 90 77.8
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 2.7e-32 142.9 96 72.9
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 3.5e-32 142.5 88 77.3
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 3.5e-32 142.5 85 81.2
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 4.6e-32 142.1 97 73.2
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 6.0e-32 141.7 88 75.0
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 6.0e-32 141.7 93 77.4
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 7.8e-32 141.4 95 69.5
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 7.8e-32 141.4 83 78.3
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 7.8e-32 141.4 83 83.1
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 7.8e-32 141.4 93 76.3
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 1.0e-31 141.0 83 81.9
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 1.0e-31 141.0 97 70.1
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 1.3e-31 140.6 89 75.3
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 1.7e-31 140.2 86 75.6
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 3.0e-31 139.4 99 75.8
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 3.9e-31 139.0 83 80.7
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 6.6e-31 138.3 91 71.4
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 1.5e-30 137.1 83 75.9
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 4.3e-30 135.6 91 72.5
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 4.3e-30 135.6 81 79.0
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 7.3e-30 134.8 95 74.7
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 1.6e-29 133.7 96 66.7
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 1.6e-29 133.7 93 72.0
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 2.1e-29 133.3 94 70.2
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 3.6e-29 132.5 81 74.1
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 6.2e-29 131.7 89 68.5
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 1.1e-28 131.0 83 75.9
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 1.5e-27 127.1 76 77.6
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 3.4e-27 125.9 82 75.6
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 5.8e-27 125.2 89 67.4
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 7.5e-27 124.8 82 72.0
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 1.7e-26 123.6 82 72.0
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 1.4e-25 120.6 72 77.8
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 3.2e-25 119.4 104 59.6
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 9.2e-25 117.9 89 62.9
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 6.0e-24 115.2 67 77.6
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 1.7e-23 113.6 70 75.7
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 2.3e-23 113.2 151 47.7
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 3.9e-23 112.5 58 87.9
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 5.0e-23 112.1 68 76.5
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 5.0e-23 112.1 68 76.5
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 1.5e-22 110.5 81 69.1
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 3.6e-21 105.9 82 67.1
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 3.6e-21 105.9 59 79.7
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 1.4e-20 104.0 62 80.6
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 2.0e-19 100.1 63 69.8
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-19 100.1 72 65.3
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 7.5e-19 98.2 57 77.2
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 1.3e-18 97.4 60 76.7
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 1.6e-16 90.5 59 71.2
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 2.1e-16 90.1 57 70.2
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 6.0e-16 88.6 84 57.1
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 1.0e-15 87.8 76 57.9
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 1.2e-13 80.9 76 51.3
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 6.8e-12 75.1 76 43.4


User provided reference genes

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