Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 0.0e+00 1340.5 652 100.0
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 2.3e-197 693.0 653 59.9
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 3.2e-191 672.5 605 58.2
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 1.7e-189 666.8 694 53.3
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 2.8e-187 659.4 669 54.4
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 2.8e-187 659.4 527 63.4
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 4.0e-186 655.6 623 57.3
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 5.8e-185 651.7 704 52.7
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 1.3e-184 650.6 528 62.9
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 2.2e-184 649.8 557 60.7
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 1.9e-180 636.7 560 59.6
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 2.5e-180 636.3 449 67.3
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 2.9e-176 622.9 658 53.3
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 4.9e-176 622.1 656 53.2
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 4.9e-176 622.1 654 52.9
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 1.9e-175 620.2 506 60.5
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 4.1e-175 619.0 496 62.7
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 5.4e-175 618.6 468 64.1
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 7.1e-175 618.2 614 55.2
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 7.1e-175 618.2 632 54.0
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 3.5e-174 615.9 683 50.7
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 4.6e-174 615.5 672 50.6
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 1.9e-172 610.1 634 52.8
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 9.6e-172 607.8 677 51.4
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 3.6e-171 605.9 684 50.6
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 5.2e-170 602.1 520 58.1
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 8.9e-170 601.3 667 51.6
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 2.6e-169 599.7 687 50.1
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 2.6e-169 599.7 502 59.8
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 2.2e-168 596.7 441 65.8
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 6.4e-168 595.1 605 52.9
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 8.4e-168 594.7 643 51.9
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 4.2e-167 592.4 692 49.6
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 7.1e-167 591.7 404 67.6
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 7.1e-167 591.7 524 58.4
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 1.6e-166 590.5 662 50.6
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 7.8e-166 588.2 565 55.2
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 1.7e-165 587.0 504 59.9
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 6.6e-165 585.1 575 54.8
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 8.7e-165 584.7 441 64.9
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 4.3e-164 582.4 676 51.3
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 4.8e-163 578.9 490 60.8
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 2.4e-162 576.6 530 57.2
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 4.0e-162 575.9 620 51.8
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 6.9e-162 575.1 616 52.4
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 1.2e-161 574.3 610 52.5
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 1.5e-161 573.9 452 63.3
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 4.4e-161 572.4 562 53.7
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 1.7e-160 570.5 615 52.8
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 8.4e-160 568.2 558 55.6
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 1.1e-159 567.8 459 61.4
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 1.1e-159 567.8 674 50.0
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 9.3e-159 564.7 666 49.1
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 1.2e-158 564.3 483 58.8
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 1.6e-158 563.9 449 61.2
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 1.6e-158 563.9 483 58.4
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 3.5e-158 562.8 488 58.4
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 4.6e-158 562.4 435 64.4
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 6.6e-157 558.5 601 50.4
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 3.3e-156 556.2 613 51.1
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 1.4e-154 550.8 690 48.3
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 1.3e-152 544.3 582 52.6
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 1.2e-150 537.7 628 50.5
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.8e-149 533.9 407 64.1
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 3.0e-149 533.1 588 49.7
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 1.8e-146 523.9 427 60.7
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 1.6e-139 500.7 596 50.0
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 3.2e-127 459.9 346 63.0
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 1.9e-119 434.1 524 47.5
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 7.7e-113 412.1 452 46.7
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 6.5e-112 409.1 471 51.8
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 5.5e-111 406.0 287 66.9
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 1.8e-90 337.8 252 64.3
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 9.8e-84 315.5 359 51.8
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 4.9e-83 313.2 389 44.5
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 9.2e-82 308.9 281 56.2
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 8.6e-80 302.4 385 48.3
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 8.3e-75 285.8 384 45.6
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 3.0e-64 250.8 280 48.6
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 1.9e-55 221.5 187 58.3
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 2.9e-35 154.5 144 56.2
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 6.0e-33 146.7 133 49.6
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 1.8e-29 135.2 78 75.6
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 1.7e-27 128.6 528 26.1
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 6.5e-27 126.7 133 48.1
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 1.3e-24 119.0 298 34.2
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 8.2e-22 109.8 126 50.0
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 8.7e-16 89.7 80 53.8
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 4.3e-15 87.4 173 38.2
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 1.5e-12 79.0 90 48.9
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 1.3e-11 75.9 57 63.2
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 2.9e-11 74.7 165 30.9
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 2.7e-09 68.2 71 52.1
Cre03.g188750 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D028824 3.0e-08 64.7 177 29.4
SGA_v2.0_scaffold26G11386 Striga asiatica HOM05D007621 ORTHO05D009631 4.4e-07 60.8 58 53.4


User provided reference genes

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