Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G2173 Punica granatum HOM05D005741 ORTHO05D007240 2.3e-279 964.9 478 100.0
Eucgr.E00405 Eucalyptus grandis HOM05D005741 ORTHO05D007240 3.3e-161 572.4 511 57.7
CiPaw.11G082200 Carya illinoinensis HOM05D005741 ORTHO05D007240 1.3e-157 560.5 514 58.9
Haze_07941 Corylus avellana HOM05D005741 ORTHO05D007240 2.2e-157 559.7 498 58.8
TWI15G0579 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 8.3e-157 557.8 507 56.0
QL12p011266 Quercus lobata HOM05D005741 ORTHO05D007240 7.0e-156 554.7 506 57.7
Thhalv10024957m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 1.6e-155 553.5 509 55.2
Thecc.03G247800 Theobroma cacao HOM05D005741 ORTHO05D007240 5.6e-153 545.0 486 58.6
Gorai.003G175200 Gossypium raimondii HOM05D005741 ORTHO05D007240 6.2e-152 541.6 494 55.5
Gohir.D03G165500 Gossypium hirsutum HOM05D005741 ORTHO05D007240 2.3e-151 539.7 494 55.1
THA.LOC104806667 Tarenaya hassleriana HOM05D005741 ORTHO05D007240 3.1e-151 539.3 509 52.8
Ciclev10019844m.g Citrus clementina HOM05D005741 ORTHO05D007240 8.9e-151 537.7 494 55.7
Manes.01G083800 Manihot esculenta HOM05D005741 ORTHO05D007240 2.0e-150 536.6 505 54.5
Duzib205G0633 Durio zibethinus HOM05D005741 ORTHO05D007240 4.4e-150 535.4 462 58.2
Potri.003G079400 Populus trichocarpa HOM05D005741 ORTHO05D007240 7.5e-150 534.6 433 60.0
Sabra03G0049500 Salix brachista HOM05D005741 ORTHO05D007240 9.8e-150 534.3 433 60.0
CARHR224030 Cardamine hirsuta HOM05D005741 ORTHO05D007240 1.3e-149 533.9 514 52.3
TWI81G0674 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 3.7e-149 532.3 506 54.0
BraA01t01920Z Brassica rapa HOM05D005741 ORTHO05D007240 4.9e-149 531.9 521 52.8
Prupe.5G065000 Prunus persica HOM05D005741 ORTHO05D007240 6.4e-149 531.6 492 57.3
ClCG01G004250 Citrullus lanatus HOM05D005741 ORTHO05D007240 8.3e-149 531.2 448 59.6
BcaNung00094 Brassica carinata HOM05D005741 ORTHO05D007240 1.1e-148 530.8 509 53.6
C01p25020 Brassica napus HOM05D005741 ORTHO05D007240 1.4e-148 530.4 521 53.0
BolC1t02446H Brassica oleracea HOM05D005741 ORTHO05D007240 1.4e-148 530.4 521 53.0
A01p19940 Brassica napus HOM05D005741 ORTHO05D007240 7.1e-148 528.1 512 53.1
CSS0012403 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 7.1e-148 528.1 490 55.1
FAN13G2335 Fragaria x ananassa HOM05D005741 ORTHO05D007240 7.1e-148 528.1 487 57.1
BcaC09g50473 Brassica carinata HOM05D005741 ORTHO05D007240 9.2e-148 527.7 498 54.2
Gohir.D09G191200 Gossypium hirsutum HOM05D005741 ORTHO05D007240 9.2e-148 527.7 497 54.9
Actinidia02155 Actinidia chinensis HOM05D005741 ORTHO05D007240 2.7e-147 526.2 485 56.5
CANSAT21G0669 Cannabis sativa HOM05D005741 ORTHO05D007240 6.0e-147 525.0 502 54.4
Gohir.A09G196600 Gossypium hirsutum HOM05D005741 ORTHO05D007240 7.8e-147 524.6 496 54.4
AL7G37290 Arabidopsis lyrata HOM05D005741 ORTHO05D007240 3.9e-146 522.3 510 52.4
FvH4_5g19490 Fragaria vesca HOM05D005741 ORTHO05D007240 3.9e-146 522.3 490 55.5
Gorai.006G214000 Gossypium raimondii HOM05D005741 ORTHO05D007240 6.6e-146 521.5 497 54.5
MELO3C005514.2 Cucumis melo HOM05D005741 ORTHO05D007240 8.6e-146 521.2 489 54.2
RcHm_v2.0_Chr7g0204071 Rosa chinensis HOM05D005741 ORTHO05D007240 8.6e-146 521.2 483 56.9
Carub.0007s2399 Capsella rubella HOM05D005741 ORTHO05D007240 1.1e-145 520.8 511 53.0
Duzib084G1038 Durio zibethinus HOM05D005741 ORTHO05D007240 1.1e-145 520.8 437 58.8
Atru.chr9.1271 Acer truncatum HOM05D005741 ORTHO05D007240 1.5e-145 520.4 503 53.3
Sed0015384 Sechium edule HOM05D005741 ORTHO05D007240 7.3e-145 518.1 490 54.5
FAN18G1401 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.6e-144 516.9 490 55.1
FAN04G2833 Fragaria x ananassa HOM05D005741 ORTHO05D007240 2.8e-144 516.2 487 56.1
FAN18G3259 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.8e-143 513.5 490 54.7
CsaV3_5G004450 Cucumis sativus L. HOM05D005741 ORTHO05D007240 2.3e-143 513.1 430 57.9
AT4G17430 Arabidopsis thaliana HOM05D005741 ORTHO05D007240 3.1e-143 512.7 509 52.1
PGSC0003DMG400004829 Solanum tuberosum HOM05D005741 ORTHO05D007240 2.0e-142 510.0 492 54.3
COL.COLO4_37119 Corchorus olitorius HOM05D005741 ORTHO05D007240 7.6e-142 508.1 404 60.1
MD04G1060600 Malus domestica HOM05D005741 ORTHO05D007240 9.9e-142 507.7 490 54.9
Solyc08g078380.3 Solanum lycopersicum HOM05D005741 ORTHO05D007240 8.4e-141 504.6 492 53.5
Sopen08g026870 Solanum pennellii HOM05D005741 ORTHO05D007240 8.4e-141 504.6 492 53.5
FAN08G2842 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.4e-140 503.8 484 55.0
Nitab4.5_0003050g0020 Nicotiana tabacum HOM05D005741 ORTHO05D007240 2.4e-140 503.1 487 54.2
Aa31sc151G50 Aethionema arabicum HOM05D005741 ORTHO05D007240 2.7e-139 499.6 507 50.9
Ca_17300_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 1.3e-138 497.3 492 51.4
GSVIVG01005817001 Vitis vinifera HOM05D005741 ORTHO05D007240 2.3e-138 496.5 481 55.1
Nn6g33867 Nelumbo nucifera HOM05D005741 ORTHO05D007240 8.6e-138 494.6 508 51.6
PSO063G3551 Papaver somniferum HOM05D005741 ORTHO05D007240 8.6e-138 494.6 496 52.4
Medtr8g104850 Medicago truncatula HOM05D005741 ORTHO05D007240 1.1e-137 494.2 487 51.7
EL10Ac1g01729 Beta vulgaris HOM05D005741 ORTHO05D007240 1.5e-137 493.8 483 53.6
DCAR_008509 Daucus carota HOM05D005741 ORTHO05D007240 1.5e-137 493.8 487 53.4
Nitab4.5_0001381g0010 Nicotiana tabacum HOM05D005741 ORTHO05D007240 1.9e-137 493.4 493 52.7
PSO782G4316 Papaver somniferum HOM05D005741 ORTHO05D007240 1.9e-137 493.4 491 52.7
TPR.G32686 Trifolium pratense HOM05D005741 ORTHO05D007240 7.3e-137 491.5 495 50.9
Psat7g009600 Pisum sativum HOM05D005741 ORTHO05D007240 1.2e-136 490.7 487 51.7
Peaxi162Scf00214g00035 Petunia axillaris HOM05D005741 ORTHO05D007240 2.1e-136 490.0 498 52.2
vmacro00008 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 4.7e-136 488.8 561 48.8
CAN.G1178.14 Capsicum annuum HOM05D005741 ORTHO05D007240 6.2e-136 488.4 460 55.7
Thhalv10000864m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 6.8e-135 485.0 512 49.8
Lj2A224T24 Lonicera japonica HOM05D005741 ORTHO05D007240 8.9e-135 484.6 485 52.6
arahy.Tifrunner.gnm1.ann1.F09Q1T Arachis hypogaea HOM05D005741 ORTHO05D007240 2.0e-134 483.4 489 51.3
Lj2g0010165 Lotus japonicus HOM05D005741 ORTHO05D007240 2.6e-134 483.0 490 51.0
Migut.A01137 Erythranthe guttata HOM05D005741 ORTHO05D007240 4.4e-134 482.3 480 51.9
arahy.Tifrunner.gnm1.ann1.915X16 Arachis hypogaea HOM05D005741 ORTHO05D007240 9.9e-134 481.1 440 54.3
Ca_17307_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 1.3e-133 480.7 429 55.2
Glyma.13G055300 Glycine max HOM05D005741 ORTHO05D007240 2.9e-133 479.6 491 50.7
Phvul.004G038100 Phaseolus vulgaris HOM05D005741 ORTHO05D007240 1.2e-131 474.2 487 49.9
Lalb_Chr07g0190101 Lupinus albus HOM05D005741 ORTHO05D007240 1.6e-131 473.8 486 50.2
Sc22g0001010 Simmondsia chinensis HOM05D005741 ORTHO05D007240 6.0e-131 471.9 484 50.0
VMungo0464G0479 Vigna mungo HOM05D005741 ORTHO05D007240 1.7e-130 470.3 487 49.7
HanXRQChr16g0501101 Helianthus annuus HOM05D005741 ORTHO05D007240 2.5e-129 466.5 484 51.7
Aqoxy3G02814 Aquilegia oxysepala HOM05D005741 ORTHO05D007240 2.1e-128 463.4 434 53.7
Cc08_g12130 Coffea canephora HOM05D005741 ORTHO05D007240 3.6e-128 462.6 472 51.3
TAR629G0196 Trochodendron aralioides HOM05D005741 ORTHO05D007240 8.1e-128 461.5 402 58.2
Os10g0561200 Oryza sativa ssp. japonica HOM05D005741 ORTHO05D007240 1.8e-127 460.3 514 47.7
Lsat_1_v5_gn_6_59361 Lactuca sativa HOM05D005741 ORTHO05D007240 6.9e-127 458.4 493 49.9
ATR0057G109 Amborella trichopoda HOM05D005741 ORTHO05D007240 9.0e-127 458.0 497 48.9
SGA_v2.0_scaffold199G41222 Striga asiatica HOM05D005741 ORTHO05D007240 1.7e-125 453.8 515 47.8
Zm00001eb023170 Zea mays HOM05D005741 ORTHO05D007240 3.8e-125 452.6 513 46.6
Rhsim03G0144800 Rhododendron simsii HOM05D005741 ORTHO05D007240 3.5e-123 446.0 501 48.5
CDE02G0403 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 6.0e-123 445.3 468 49.4
CDE09G0915 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 1.0e-122 444.5 451 50.6
Hund30921 Selenicereus undatus HOM05D005741 ORTHO05D007240 3.9e-122 442.6 458 52.0
SalBow5G2168 Salvia bowleyana HOM05D005741 ORTHO05D007240 5.6e-121 438.7 473 49.3
AUR62022412 Chenopodium quinoa HOM05D005741 ORTHO05D007240 3.6e-120 436.0 405 55.3
Hund20780 Selenicereus undatus HOM05D005741 ORTHO05D007240 8.1e-120 434.9 461 51.4
unitig_0.g1051 Utricularia gibba HOM05D005741 ORTHO05D007240 3.1e-119 433.0 489 46.4
AUR62042169 Chenopodium quinoa HOM05D005741 ORTHO05D007240 9.0e-119 431.4 405 55.3
SHI07684 Sapria himalayana HOM05D005741 ORTHO05D007240 4.5e-118 429.1 482 47.9
SEGI_37405 Sequoiadendron giganteum HOM05D005741 ORTHO05D007240 8.4e-117 424.9 489 46.0
ECA233G5769 Erigeron canadensis HOM05D000263 ORTHO05D000213 2.3e-114 416.8 411 52.3
Gohir.A03G006700 Gossypium hirsutum HOM05D005741 ORTHO05D007240 3.9e-114 416.0 380 55.0
TAR365G0013 Trochodendron aralioides HOM05D005741 ORTHO05D007240 1.5e-113 414.1 293 67.2
Dinv03497 Davidia involucrata HOM05D005741 ORTHO05D007240 6.2e-112 408.7 299 64.5
CSS0035552 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 3.8e-109 399.4 293 65.5
Hma1.2p1_1136F.1_g260550 Hydrangea macrophylla HOM05D005741 ORTHO05D007240 3.8e-109 399.4 315 61.9
Oeu036348.1 Olea europaea HOM05D005741 ORTHO05D007240 7.9e-107 391.7 298 62.1
Cc11_g11020 Coffea canephora HOM05D005741 ORTHO05D007240 1.1e-97 361.3 285 59.6
QL05p056282 Quercus lobata HOM05D005741 ORTHO05D007240 4.5e-86 322.8 354 50.6
Dinv39172 Davidia involucrata HOM05D005741 ORTHO05D007240 2.7e-83 313.5 248 63.7
QL05p056380 Quercus lobata HOM05D005741 ORTHO05D007240 1.5e-76 291.2 256 59.4
AagrBONN_evm.TU.Sc2ySwM_228.4051__4052 Anthoceros agrestis HOM05D005741 ORTHO05D007240 1.0e-74 285.0 469 36.7
MD06G1054000 Malus domestica HOM05D005741 ORTHO05D007240 1.7e-69 267.7 204 64.2
SMO358G0726 Selaginella moellendorffii HOM05D005741 ORTHO05D007240 1.2e-67 261.5 483 35.2
Lj1g0021170 Lotus japonicus HOM05D005741 ORTHO05D007240 5.9e-62 242.7 372 40.6
Aa31LG6G180 Aethionema arabicum HOM05D005741 ORTHO05D007240 2.8e-59 233.8 306 44.4
QL05p056241 Quercus lobata HOM05D005741 ORTHO05D007240 1.0e-53 215.3 158 65.2
Glyma.19G032167 Glycine max HOM05D005741 ORTHO05D007240 8.6e-53 212.2 180 58.9
Mapoly0027s0023 Marchantia polymorpha HOM05D005741 ORTHO05D007240 1.1e-52 211.8 555 29.7
CSS0043083 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 5.6e-52 209.5 169 59.2
Sed0012710 Sechium edule HOM05D005741 ORTHO05D007240 1.8e-47 194.5 209 50.2
vmacro00009 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 3.0e-37 160.6 199 47.2
vmacro00011 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 5.6e-36 156.4 276 37.3
Pp3c6_17590 Physcomitrium patens HOM05D005741 ORTHO05D007240 1.3e-32 145.2 240 34.6
CSS0008948 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 1.9e-31 141.4 111 60.4
CSS0012087 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 3.2e-31 140.6 119 56.3
CSS0007358 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 1.6e-30 138.3 115 56.5
Glyma.19G032233 Glycine max HOM05D005741 ORTHO05D007240 2.7e-30 137.5 142 49.3
Mapoly0048s0017 Marchantia polymorpha HOM05D005741 ORTHO05D007240 1.1e-28 132.1 453 24.3
Actinidia14404 Actinidia chinensis HOM05D005741 ORTHO05D007240 1.3e-24 118.6 124 46.8
Pp3c6_17579 Physcomitrium patens HOM05D005741 ORTHO05D007240 1.3e-21 108.6 82 57.3
Aa31LG6G170 Aethionema arabicum HOM05D005741 ORTHO05D007240 2.1e-19 101.3 111 44.1
Oeu057691.1 Olea europaea HOM05D005741 ORTHO05D007240 8.9e-18 95.9 73 65.8
Hma1.2p1_2773F.1_g328260 Hydrangea macrophylla HOM05D005741 ORTHO05D228475 1.0e-13 82.4 84 50.0
AL7G37230 Arabidopsis lyrata HOM05D005741 ORTHO05D007240 4.8e-11 73.6 41 73.2


User provided reference genes

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