Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G2132 Punica granatum HOM05D007315 ORTHO05D008940 0.0e+00 1207.2 621 100.0
Eucgr.A00422 Eucalyptus grandis HOM05D007315 ORTHO05D008940 1.1e-87 328.6 659 39.2
QL10p064604 Quercus lobata HOM05D007315 ORTHO05D008940 2.6e-78 297.4 719 34.9
Potri.007G145400 Populus trichocarpa HOM05D007315 ORTHO05D008940 4.5e-78 296.6 726 35.7
GSVIVG01038254001 Vitis vinifera HOM05D007315 ORTHO05D008940 7.7e-78 295.8 656 37.8
QL10p065726 Quercus lobata HOM05D007315 ORTHO05D008940 1.1e-76 292.0 718 35.0
Potri.017G002200 Populus trichocarpa HOM05D007315 ORTHO05D008940 3.6e-75 287.0 707 35.6
Ciclev10019166m.g Citrus clementina HOM05D007315 ORTHO05D008940 2.0e-73 281.2 702 34.8
Haze_11126 Corylus avellana HOM05D007315 ORTHO05D008940 3.3e-73 280.4 733 34.1
FAN23G0376 Fragaria x ananassa HOM05D007315 ORTHO05D008940 1.7e-72 278.1 686 36.2
Prupe.7G270200 Prunus persica HOM05D007315 ORTHO05D008940 2.2e-72 277.7 650 35.5
CANSAT78G2341 Cannabis sativa HOM05D007315 ORTHO05D008940 1.1e-71 275.4 667 34.2
MD15G1142800 Malus domestica HOM05D007315 ORTHO05D008940 1.1e-71 275.4 711 37.0
TWI15G1252 Tripterygium wilfordii HOM05D007315 ORTHO05D008940 1.1e-71 275.4 683 34.8
CiPaw.02G125100 Carya illinoinensis HOM05D007315 ORTHO05D008940 5.3e-71 273.1 710 35.4
FAN26G2088 Fragaria x ananassa HOM05D007315 ORTHO05D008940 1.2e-70 271.9 682 34.9
FAN26G2097 Fragaria x ananassa HOM05D007315 ORTHO05D008940 1.2e-70 271.9 682 34.9
FAN28G1745 Fragaria x ananassa HOM05D007315 ORTHO05D008940 2.0e-70 271.2 642 34.9
Sabra07G0115600 Salix brachista HOM05D007315 ORTHO05D008940 1.0e-69 268.9 722 34.6
Atru.chr3.1974 Acer truncatum HOM05D007315 ORTHO05D008940 2.9e-69 267.3 622 36.5
Cfa008519 Carpinus fangiana HOM05D007315 ORTHO05D008940 3.8e-69 266.9 728 32.8
Rhsim09G0003400 Rhododendron simsii HOM05D007315 ORTHO05D008940 2.5e-68 264.2 653 34.9
RcHm_v2.0_Chr2g0084511 Rosa chinensis HOM05D007315 ORTHO05D008940 2.5e-68 264.2 661 34.8
Dinv33248 Davidia involucrata HOM05D007315 ORTHO05D008940 7.2e-68 262.7 680 33.5
Manes.05G207100 Manihot esculenta HOM05D007315 ORTHO05D008940 7.2e-68 262.7 715 33.3
Sabra17G0006200 Salix brachista HOM05D007315 ORTHO05D008940 1.4e-66 258.5 684 34.5
Gorai.011G004300 Gossypium raimondii HOM05D007315 ORTHO05D008940 2.3e-66 257.7 607 34.3
Cpa.g.sc151.10 Carica papaya HOM05D007315 ORTHO05D008940 1.1e-63 248.8 579 35.1
Duzib128G0490 Durio zibethinus HOM05D007315 ORTHO05D008940 4.5e-62 243.4 675 33.9
AUR62002486 Chenopodium quinoa HOM05D007315 ORTHO05D008940 5.9e-62 243.0 671 33.4
EL10Ac3g06171 Beta vulgaris HOM05D007315 ORTHO05D008940 3.8e-61 240.4 659 34.0
CSS0005699 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 8.5e-61 239.2 591 34.3
Gohir.A10G003901 Gossypium hirsutum HOM05D007315 ORTHO05D008940 1.1e-60 238.8 665 31.7
Gohir.D10G003900 Gossypium hirsutum HOM05D007315 ORTHO05D008940 1.2e-59 235.3 683 31.6
DCAR_027494 Daucus carota HOM05D007315 ORTHO05D008940 2.1e-59 234.6 656 32.2
FvH4_1g00220 Fragaria vesca HOM05D007315 ORTHO05D008940 3.6e-59 233.8 673 32.5
Thecc.05G001400 Theobroma cacao HOM05D007315 ORTHO05D008940 5.2e-58 229.9 688 32.4
Nn1g09432 Nelumbo nucifera HOM05D007315 ORTHO05D008940 2.2e-56 224.6 720 32.2
Sed0008861 Sechium edule HOM05D007315 ORTHO05D008940 2.2e-56 224.6 679 30.6
AUR62023706 Chenopodium quinoa HOM05D007315 ORTHO05D008940 8.2e-56 222.6 615 33.0
CsaV3_2G011220 Cucumis sativus L. HOM05D007315 ORTHO05D008940 5.9e-54 216.5 666 30.0
ClCG06G009750 Citrullus lanatus HOM05D007315 ORTHO05D008940 1.3e-53 215.3 700 31.0
CSS0008240 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 3.8e-53 213.8 590 32.5
MELO3C020340.2 Cucumis melo HOM05D007315 ORTHO05D008940 1.1e-52 212.2 665 31.7
Lj5g0028022 Lotus japonicus HOM05D007315 ORTHO05D008940 3.2e-52 210.7 671 32.2
COL.COLO4_23477 Corchorus olitorius HOM05D007315 ORTHO05D008940 6.1e-51 206.5 515 33.2
Glyma.10G188000 Glycine max HOM05D007315 ORTHO05D008940 6.1e-51 206.5 717 30.7
Peaxi162Scf00057g00225 Petunia axillaris HOM05D007315 ORTHO05D008940 1.8e-50 204.9 640 30.9
Oeu018063.1 Olea europaea HOM05D007315 ORTHO05D008940 8.8e-50 202.6 569 33.7
Ah.13g073150 Amaranthus hybridus HOM05D007315 ORTHO05D008940 1.2e-49 202.2 617 32.1
Glyma.20G202800 Glycine max HOM05D007315 ORTHO05D008940 1.5e-49 201.8 697 30.7
PGSC0003DMG400020383 Solanum tuberosum HOM05D007315 ORTHO05D008940 1.5e-49 201.8 667 31.0
TAR362G0103 Trochodendron aralioides HOM05D007315 ORTHO05D008940 4.4e-49 200.3 687 30.7
VMungo0720G0938 Vigna mungo HOM05D007315 ORTHO05D008940 2.2e-48 198.0 674 30.9
Lalb_Chr02g0150561 Lupinus albus HOM05D007315 ORTHO05D008940 2.8e-48 197.6 707 30.0
Solyc12g017970.1 Solanum lycopersicum HOM05D007315 ORTHO05D008940 4.8e-48 196.8 667 30.6
MD00G1086900 Malus domestica HOM05D007315 ORTHO05D008940 8.3e-48 196.1 577 34.1
Sopen12g009190 Solanum pennellii HOM05D007315 ORTHO05D008940 3.1e-47 194.1 668 30.4
Nitab4.5_0002789g0030 Nicotiana tabacum HOM05D007315 ORTHO05D008940 1.2e-46 192.2 658 31.2
arahy.Tifrunner.gnm1.ann1.K0K7GF Arachis hypogaea HOM05D007315 ORTHO05D008940 2.0e-46 191.4 696 30.2
TPR.G26430 Trifolium pratense HOM05D007315 ORTHO05D008940 3.5e-46 190.7 689 30.9
Atru.chr3.1981 Acer truncatum HOM05D007315 ORTHO05D008940 7.7e-46 189.5 467 34.9
Ca_09817_v3 Cicer arietinum L. HOM05D007315 ORTHO05D008940 7.7e-46 189.5 701 30.7
Nitab4.5_0000160g0040 Nicotiana tabacum HOM05D007315 ORTHO05D008940 2.2e-45 188.0 644 30.1
Psat6g133000 Pisum sativum HOM05D007315 ORTHO05D008940 3.8e-45 187.2 650 31.1
CiPaw.01G202000 Carya illinoinensis HOM05D007315 ORTHO05D008940 9.4e-44 182.6 699 29.6
arahy.Tifrunner.gnm1.ann1.BRX18T Arachis hypogaea HOM05D007315 ORTHO05D008940 1.2e-43 182.2 683 31.2
Medtr1g073930 Medicago truncatula HOM05D007315 ORTHO05D008940 6.1e-43 179.9 689 29.6
THA.LOC104804323 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 1.5e-41 175.3 692 30.1
Phvul.007G128900 Phaseolus vulgaris HOM05D007315 ORTHO05D008940 3.4e-41 174.1 669 29.9
ECA238G3268 Erigeron canadensis HOM05D007315 ORTHO05D008940 4.4e-41 173.7 481 32.6
Ah.07g203260 Amaranthus hybridus HOM05D007315 ORTHO05D008940 1.3e-40 172.2 582 31.1
MSTRG.24547 Avicennia marina HOM05D007315 ORTHO05D008940 4.1e-39 167.2 710 27.5
AT2G43990 Arabidopsis thaliana HOM05D007315 ORTHO05D008940 1.3e-37 162.2 672 31.4
THA.LOC104802348 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 1.5e-36 158.7 694 27.5
Sc19g0002390 Simmondsia chinensis HOM05D007315 ORTHO05D008940 9.5e-36 156.0 668 28.4
Hma1.2p1_1085F.1_g255400 Hydrangea macrophylla HOM05D007315 ORTHO05D008940 1.2e-35 155.6 480 31.0
Carub.0004s2655 Capsella rubella HOM05D007315 ORTHO05D008940 4.7e-35 153.7 674 30.0
PSO732G0261 Papaver somniferum HOM05D007315 ORTHO05D008940 8.0e-35 152.9 521 31.1
Migut.N03024 Erythranthe guttata HOM05D007315 ORTHO05D008940 4.4e-33 147.1 567 28.7
AL4G42870 Arabidopsis lyrata HOM05D007315 ORTHO05D008940 1.3e-32 145.6 669 30.0
HanXRQChr14g0438301 Helianthus annuus HOM05D007315 ORTHO05D008940 1.3e-32 145.6 476 30.0
COL.COLO4_20289 Corchorus olitorius HOM05D007315 ORTHO05D008940 3.7e-32 144.1 259 36.3
Sp4g26080 Schrenkiella parvula HOM05D007315 ORTHO05D008940 3.7e-32 144.1 682 29.9
Thhalv10001359m.g Eutrema salsugineum HOM05D007315 ORTHO05D008940 1.1e-31 142.5 648 29.2
Aqoxy5G03722 Aquilegia oxysepala HOM05D007315 ORTHO05D008940 2.0e-30 138.3 658 27.4
CARHR139160 Cardamine hirsuta HOM05D007315 ORTHO05D008940 3.5e-30 137.5 674 28.6
SalBow3G0669 Salvia bowleyana HOM05D007315 ORTHO05D008940 1.6e-27 128.6 570 31.8
BolC4t22121H Brassica oleracea HOM05D007315 ORTHO05D008940 2.1e-27 128.3 504 31.0
A05p04140 Brassica napus HOM05D007315 ORTHO05D008940 2.8e-27 127.9 489 31.7
C04p04910 Brassica napus HOM05D007315 ORTHO05D008940 2.3e-26 124.8 436 31.9
MBI07_g42068_MAGBIO Magnolia biondii HOM05D007315 ORTHO05D008940 8.9e-26 122.9 454 29.5
QL10p064445 Quercus lobata HOM05D007315 ORTHO05D008940 2.0e-25 121.7 377 33.2
CDE04G0399 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 4.4e-25 120.6 500 26.0
CDE07G0865 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 7.5e-25 119.8 599 26.5
SGA_v2.0_scaffold25G11016 Striga asiatica HOM05D007315 ORTHO05D008940 2.9e-24 117.9 649 26.0
BraA05t19400Z Brassica rapa HOM05D007315 ORTHO05D008940 2.4e-23 114.8 486 30.9
BcaC02g12347 Brassica carinata HOM05D007315 ORTHO05D008940 8.1e-19 99.8 427 29.0
HPP92_007592 Vanilla planifolia HOM05D007315 ORTHO05D008940 2.0e-17 95.1 488 26.0
SGA_v2.0_scaffold19G08894 Striga asiatica HOM05D007315 ORTHO05D008940 4.6e-14 84.0 659 24.1
Zm00001eb434100 Zea mays HOM05D019859 ORTHO05D008940 4.3e-12 77.4 683 24.2
Duzib093G0367 Durio zibethinus HOM05D007315 ORTHO05D008940 9.5e-12 76.3 447 30.2
Zm00001eb136730 Zea mays HOM05D019859 ORTHO05D008940 2.8e-11 74.7 394 27.7
Os11g0247500 Oryza sativa ssp. japonica HOM05D019859 ORTHO05D008940 8.1e-11 73.2 593 24.6
unitig_578.g16246 Utricularia gibba HOM05D007315 ORTHO05D008940 3.1e-10 71.2 282 31.2


User provided reference genes

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