Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G2058 Punica granatum HOM05D008132 ORTHO05D005763 4.9e-45 184.5 122 100.0
PGR042G0640 Punica granatum HOM05D008132 ORTHO05D005763 1.1e-33 146.7 122 82.0
PGR042G2773 Punica granatum HOM05D008132 ORTHO05D005763 1.7e-21 106.3 147 66.7
PGR042G3008 Punica granatum HOM05D008132 ORTHO05D014248 6.6e-18 94.4 126 61.9
Cc03_g08950 Coffea canephora HOM05D008132 ORTHO05D005763 5.4e-12 74.7 129 55.8
arahy.Tifrunner.gnm1.ann1.5E44W3 Arachis hypogaea HOM05D008132 ORTHO05D005763 6.0e-11 71.2 129 50.4
Oeu022674.1 Olea europaea HOM05D008132 ORTHO05D005763 3.9e-10 68.6 128 58.6
QL08p029862 Quercus lobata HOM05D008132 ORTHO05D005763 1.1e-09 67.0 135 55.6
Medtr5g084330 Medicago truncatula HOM05D009657 ORTHO05D005763 7.4e-09 64.3 133 51.1
Cpa.g.sc132.70 Carica papaya HOM05D008132 ORTHO05D005763 9.6e-09 63.9 131 50.4
Cpa.g.sc132.73 Carica papaya HOM05D008132 ORTHO05D005763 9.6e-09 63.9 131 50.4
Migut.G01155 Erythranthe guttata HOM05D008132 ORTHO05D005763 1.6e-08 63.2 133 52.6
Migut.G01096 Erythranthe guttata HOM05D008132 ORTHO05D005763 2.1e-08 62.8 137 54.7
Migut.G00657 Erythranthe guttata HOM05D008132 ORTHO05D005763 3.7e-08 62.0 127 44.9
Migut.G01101 Erythranthe guttata HOM05D008132 ORTHO05D005763 3.7e-08 62.0 127 44.9
Migut.O00629 Erythranthe guttata HOM05D008132 ORTHO05D005763 3.7e-08 62.0 127 44.9
GSVIVG01030407001 Vitis vinifera HOM05D008132 ORTHO05D005763 3.7e-08 62.0 171 45.0
Migut.G00827 Erythranthe guttata HOM05D008132 ORTHO05D005763 4.8e-08 61.6 136 54.4
EL10Ac9g22778 Beta vulgaris HOM05D008132 ORTHO05D005763 8.1e-08 60.8 131 51.9
COL.COLO4_04943 Corchorus olitorius HOM05D008132 ORTHO05D005763 8.1e-08 60.8 127 57.5
Eucgr.A01080 Eucalyptus grandis HOM05D008132 ORTHO05D005763 1.1e-07 60.5 144 52.8
Ciclev10017145m.g Citrus clementina HOM05D016168 ORTHO05D005763 2.4e-07 59.3 63 58.7
LjContig00357g0014262 Lotus japonicus HOM05D009657 ORTHO05D005763 3.1e-07 58.9 138 55.8
CiPaw.03G275800 Carya illinoinensis HOM05D052008 ORTHO05D005763 5.3e-07 58.2 130 39.2
CAN.G2020.3 Capsicum annuum HOM05D012878 ORTHO05D005763 9.0e-07 57.4 123 50.4
Glyma.14G051900 Glycine max HOM05D016758 ORTHO05D005763 1.5e-06 56.6 135 51.1
Actinidia09763 Actinidia chinensis HOM05D008132 ORTHO05D005763 3.4e-06 55.5 151 45.0
MD09G1118600 Malus domestica HOM05D008132 ORTHO05D005763 4.5e-06 55.1 122 53.3
Thecc.01G236900 Theobroma cacao HOM05D008132 ORTHO05D005763 4.5e-06 55.1 133 55.6
Nn1g09274 Nelumbo nucifera HOM05D008132 ORTHO05D005763 5.8e-06 54.7 139 51.1
PGR142G4197 Punica granatum HOM05D008132 ORTHO05D005763 5.8e-06 54.7 142 52.8
Migut.G00825 Erythranthe guttata HOM05D008132 ORTHO05D005763 7.6e-06 54.3 159 42.1
Sopen09g035640 Solanum pennellii HOM05D016138 ORTHO05D005763 7.6e-06 54.3 59 57.6
HPP92_015776 Vanilla planifolia HOM05D008132 ORTHO05D005763 7.6e-06 54.3 133 53.4
Glyma.14G052000 Glycine max HOM05D016758 ORTHO05D005763 1.0e-05 53.9 132 54.5


User provided reference genes

Program Settings