Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G2028 Punica granatum HOM05D005953 ORTHO05D004056 6.4e-59 230.7 132 100.0
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 2.8e-14 82.4 91 53.8
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 6.3e-14 81.3 90 56.7
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 8.2e-14 80.9 90 53.3
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 9.1e-13 77.4 90 54.4
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 9.1e-13 77.4 90 54.4
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 1.6e-12 76.6 120 44.2
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 2.0e-12 76.3 90 53.3
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 4.5e-12 75.1 90 55.6
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 3.2e-10 68.9 90 53.3
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 7.2e-10 67.8 90 53.3
Glyma.12G112600 Glycine max HOM05D005953 ORTHO05D004056 7.2e-10 67.8 91 51.6
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 2.1e-09 66.2 89 52.8
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 2.1e-09 66.2 89 52.8
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 2.7e-09 65.9 91 48.4
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 3.6e-09 65.5 92 50.0
Eucgr.A01816 Eucalyptus grandis HOM05D005953 ORTHO05D004056 1.0e-08 63.9 111 43.2
Phvul.011G114200 Phaseolus vulgaris HOM05D005953 ORTHO05D004056 1.0e-08 63.9 91 49.5
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 2.3e-08 62.8 90 51.1
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 3.0e-08 62.4 90 47.8
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 3.0e-08 62.4 90 47.8
MELO3C018738.2 Cucumis melo HOM05D005953 ORTHO05D004056 4.0e-08 62.0 90 48.9
Glyma.06G293200 Glycine max HOM05D005953 ORTHO05D004056 5.2e-08 61.6 90 46.7
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 2.0e-07 59.7 90 42.2
CDE08G1618 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 2.6e-07 59.3 92 51.1
Potri.019G111501 Populus trichocarpa HOM05D005953 ORTHO05D004056 3.3e-07 58.9 90 47.8
Sabra13G0111400 Salix brachista HOM05D005953 ORTHO05D004056 4.4e-07 58.5 105 41.9
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 7.5e-07 57.8 90 47.8
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 7.5e-07 57.8 90 45.6
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 7.5e-07 57.8 91 49.5
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 9.7e-07 57.4 90 43.3
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 9.7e-07 57.4 90 44.4
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 9.7e-07 57.4 91 49.5
arahy.Tifrunner.gnm1.ann1.P9B1J4 Arachis hypogaea HOM05D005953 ORTHO05D004056 1.3e-06 57.0 90 47.8
Gorai.005G201700 Gossypium raimondii HOM05D025024 ORTHO05D004056 1.7e-06 56.6 115 39.1
MD17G1240800 Malus domestica HOM05D005953 ORTHO05D004056 1.7e-06 56.6 90 44.4
Manes.13G147000 Manihot esculenta HOM05D005953 ORTHO05D004056 1.7e-06 56.6 92 43.5
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 1.7e-06 56.6 91 49.5
Aqoxy1G02469 Aquilegia oxysepala HOM05D005953 ORTHO05D004056 2.2e-06 56.2 90 51.1
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 2.2e-06 56.2 90 43.3
ECA246G2973 Erigeron canadensis HOM05D005953 ORTHO05D004056 2.2e-06 56.2 92 47.8
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 2.2e-06 56.2 90 43.3
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 2.2e-06 56.2 90 48.9
Gohir.A03G156801 Gossypium hirsutum HOM05D025024 ORTHO05D004056 2.8e-06 55.8 92 40.2
Gohir.D02G180001 Gossypium hirsutum HOM05D025024 ORTHO05D004056 2.8e-06 55.8 115 39.1
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 3.7e-06 55.5 90 45.6
ClCG07G002930 Citrullus lanatus HOM05D005953 ORTHO05D004056 4.8e-06 55.1 90 46.7
Potri.013G131900 Populus trichocarpa HOM05D005953 ORTHO05D004056 4.8e-06 55.1 90 44.4


User provided reference genes

Program Settings