Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 1.6e-150 536.2 287 100.0
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 4.2e-103 378.6 286 73.4
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 3.3e-100 369.0 283 71.4
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 5.6e-100 368.2 285 70.9
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 7.3e-100 367.9 285 70.9
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 2.1e-99 366.3 290 71.4
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 2.1e-99 366.3 282 71.3
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 2.8e-99 365.9 282 72.0
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 3.6e-99 365.5 284 73.6
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 5.3e-98 361.7 300 68.0
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 6.9e-98 361.3 249 74.7
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 9.0e-98 360.9 285 70.2
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 2.0e-97 359.8 281 71.9
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 9.9e-97 357.5 316 65.2
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 8.4e-96 354.4 283 70.0
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 1.4e-95 353.6 282 68.4
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 1.9e-95 353.2 282 69.5
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 2.4e-95 352.8 283 70.3
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 4.2e-95 352.1 288 70.1
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 4.2e-95 352.1 282 69.1
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 7.8e-94 347.8 255 75.3
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 1.7e-93 346.7 255 75.3
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 1.7e-93 346.7 285 69.5
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 3.0e-93 345.9 283 67.8
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 5.1e-93 345.1 302 66.6
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 8.7e-93 344.4 287 69.3
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 1.5e-92 343.6 280 70.4
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 1.5e-92 343.6 287 67.9
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 2.5e-92 342.8 253 74.7
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 1.6e-91 340.1 284 66.2
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 2.8e-91 339.3 280 67.5
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 2.8e-91 339.3 300 64.0
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 3.6e-91 339.0 289 66.4
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 3.6e-91 339.0 287 68.6
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 6.2e-91 338.2 281 69.0
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 1.4e-90 337.0 285 68.1
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 1.4e-90 337.0 253 73.1
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 1.8e-90 336.7 246 73.2
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 2.4e-90 336.3 289 65.7
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 6.9e-90 334.7 280 67.1
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 9.0e-90 334.3 279 67.4
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 1.2e-89 334.0 282 66.3
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 1.5e-89 333.6 282 67.4
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 4.5e-89 332.0 287 66.9
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 5.8e-89 331.6 288 66.7
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 9.9e-89 330.9 284 65.8
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 2.2e-88 329.7 303 63.4
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 2.2e-88 329.7 303 62.4
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 6.4e-88 328.2 266 68.0
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.1e-87 327.4 280 67.9
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 1.9e-87 326.6 246 69.1
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 2.4e-87 326.2 301 61.8
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 3.2e-87 325.9 285 66.3
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 3.2e-87 325.9 306 61.8
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 5.4e-87 325.1 301 61.8
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 7.1e-87 324.7 286 66.4
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 7.1e-87 324.7 283 66.1
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 9.3e-87 324.3 293 63.1
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 9.3e-87 324.3 289 63.3
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 1.6e-86 323.6 284 64.4
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 1.6e-86 323.6 279 64.9
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 2.1e-86 323.2 284 65.5
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 2.1e-86 323.2 284 65.5
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 3.5e-86 322.4 287 63.1
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 4.6e-86 322.0 287 63.1
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 7.9e-86 321.2 284 65.1
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 1.0e-85 320.9 284 65.1
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 1.0e-85 320.9 287 63.1
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 1.3e-85 320.5 250 70.0
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 3.9e-85 318.9 250 69.6
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 5.1e-85 318.5 279 63.4
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 7.4e-84 314.7 295 61.7
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 3.7e-83 312.4 280 64.3
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.7e-83 312.4 280 64.3
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 1.8e-82 310.1 294 60.5
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 1.2e-81 307.4 279 63.1
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 1.5e-81 307.0 301 59.5
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.0e-81 306.6 280 63.2
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 3.4e-81 305.8 205 77.6
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.1e-79 300.8 284 62.3
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.1e-79 300.8 284 62.3
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 1.4e-79 300.4 287 59.6
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 3.5e-78 295.8 323 55.1
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.3e-77 293.9 309 57.6
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 3.0e-77 292.7 279 61.3
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 8.7e-77 291.2 281 59.4
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 4.8e-75 285.4 314 58.3
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 6.9e-74 281.6 288 57.6
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 2.0e-73 280.0 283 59.0
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 4.5e-73 278.9 287 58.5
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 7.6e-73 278.1 180 78.3
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 2.2e-72 276.6 263 58.6
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 6.5e-72 275.0 285 59.3
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 7.1e-71 271.6 283 58.7
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 2.3e-69 266.5 289 55.7
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 2.0e-65 253.4 285 56.5
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 5.9e-65 251.9 173 72.8
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 1.3e-64 250.8 285 56.5
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 7.2e-63 245.0 173 74.0
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 7.9e-62 241.5 404 42.1
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 2.3e-61 240.0 289 56.4
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 6.3e-59 231.9 293 53.2
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 1.8e-50 203.8 242 51.7
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 5.0e-48 195.7 133 76.7
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 3.0e-45 186.4 158 66.5
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 4.4e-44 182.6 172 63.4
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 2.5e-39 166.8 181 56.9
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 1.7e-35 154.1 132 63.6
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 2.8e-35 153.3 169 58.0
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 4.5e-33 146.0 142 59.9
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 2.7e-30 136.7 147 57.1
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 7.5e-28 128.6 77 81.8
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 5.2e-21 105.9 108 62.0
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 6.8e-21 105.5 151 47.0
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 5.7e-20 102.4 114 56.1
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 1.4e-18 97.8 111 58.6
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 8.9e-13 78.6 216 33.8
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 6.0e-09 65.9 113 42.5
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 1.5e-07 61.2 42 64.3
Cre10.g423350 Chlamydomonas reinhardtii HOM05D006579 ORTHO05D007783 3.3e-07 60.1 198 31.8
BcaB03g13515 Brassica carinata HOM05D006579 ORTHO05D007783 9.5e-07 58.5 72 50.0


User provided reference genes

Program Settings