Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1917 Punica granatum HOM05D007265 ORTHO05D009118 3.2e-27 124.4 66 100.0
Nn1g00287 Nelumbo nucifera HOM05D007265 ORTHO05D009118 4.4e-24 114.0 64 90.6
ATR0602G127 Amborella trichopoda HOM05D007265 ORTHO05D009118 7.5e-24 113.2 64 90.6
TAR374G1528 Trochodendron aralioides HOM05D007265 ORTHO05D009118 1.3e-23 112.5 61 93.4
Duzib138G0325 Durio zibethinus HOM05D007265 ORTHO05D009118 2.2e-23 111.7 66 87.9
MD01G1083600 Malus domestica HOM05D007265 ORTHO05D009118 3.7e-23 110.9 63 90.5
MD07G1152300 Malus domestica HOM05D007265 ORTHO05D009118 3.7e-23 110.9 63 90.5
CSS0038215 Camellia sinensis var. sinensis HOM05D007265 ORTHO05D009118 4.8e-23 110.5 66 87.9
Gohir.D12G116700 Gossypium hirsutum HOM05D007265 ORTHO05D009118 4.8e-23 110.5 66 86.4
Hma1.2p1_0390F.1_g142620 Hydrangea macrophylla HOM05D007265 ORTHO05D009118 8.3e-23 109.8 64 87.5
Oeu008708.1 Olea europaea HOM05D007265 ORTHO05D009118 8.3e-23 109.8 64 85.9
GSVIVG01027169001 Vitis vinifera HOM05D007265 ORTHO05D009118 1.1e-22 109.4 66 84.8
CiPaw.01G077600 Carya illinoinensis HOM05D007265 ORTHO05D009118 1.4e-22 109.0 63 88.9
DCAR_005402 Daucus carota HOM05D007265 ORTHO05D009118 1.4e-22 109.0 66 84.8
Gohir.A11G097900 Gossypium hirsutum HOM05D007265 ORTHO05D009118 1.4e-22 109.0 66 84.8
Gohir.D11G102600 Gossypium hirsutum HOM05D007265 ORTHO05D009118 1.4e-22 109.0 66 84.8
Nitab4.5_0001763g0020 Nicotiana tabacum HOM05D007265 ORTHO05D009118 1.4e-22 109.0 66 86.4
Prupe.2G190600 Prunus persica HOM05D007265 ORTHO05D009118 1.4e-22 109.0 63 88.9
Cc02_g39560 Coffea canephora HOM05D007265 ORTHO05D009118 1.8e-22 108.6 63 87.3
Lj7E499T0 Lonicera japonica HOM05D007265 ORTHO05D009118 2.4e-22 108.2 66 83.3
Nitab4.5_0003865g0020 Nicotiana tabacum HOM05D007265 ORTHO05D009118 3.1e-22 107.8 64 85.9
Thecc.01G340400 Theobroma cacao HOM05D007265 ORTHO05D009118 3.1e-22 107.8 66 84.8
Duzib133G0073 Durio zibethinus HOM05D007265 ORTHO05D009118 5.4e-22 107.1 66 84.8
Gohir.A12G113200 Gossypium hirsutum HOM05D007265 ORTHO05D009118 7.0e-22 106.7 66 83.3
Nitab4.5_0000258g0270 Nicotiana tabacum HOM05D007265 ORTHO05D009118 9.1e-22 106.3 66 81.8
Atru.chr5.686 Acer truncatum HOM05D007265 ORTHO05D009118 2.0e-21 105.1 63 84.1
CAN.G1415.20 Capsicum annuum HOM05D007265 ORTHO05D009118 2.0e-21 105.1 66 81.8
PSO063G4371 Papaver somniferum HOM05D007265 ORTHO05D009118 2.0e-21 105.1 64 82.8
Glyma.03G258500 Glycine max HOM05D007265 ORTHO05D009118 2.7e-21 104.8 63 85.7
Glyma.19G257100 Glycine max HOM05D007265 ORTHO05D009118 2.7e-21 104.8 63 85.7
DCAR_025264 Daucus carota HOM05D007265 ORTHO05D009118 3.5e-21 104.4 66 81.8
PSO170G4391 Papaver somniferum HOM05D007265 ORTHO05D009118 3.5e-21 104.4 64 82.8
PGSC0003DMG400000233 Solanum tuberosum HOM05D007265 ORTHO05D009118 3.5e-21 104.4 64 84.4
HanXRQChr16g0521331 Helianthus annuus HOM05D007265 ORTHO05D009118 4.5e-21 104.0 64 82.8
Aqoxy5G04249 Aquilegia oxysepala HOM05D007265 ORTHO05D009118 7.7e-21 103.2 61 85.2
Os05g0542100 Oryza sativa ssp. japonica HOM05D007265 ORTHO05D009118 7.7e-21 103.2 64 81.2
HPP92_020189 Vanilla planifolia HOM05D004435 ORTHO05D005103 7.7e-21 103.2 64 79.7
MELO3C022263.2 Cucumis melo HOM05D007265 ORTHO05D009118 1.0e-20 102.8 63 82.5
Sed0002056 Sechium edule HOM05D007265 ORTHO05D009118 1.0e-20 102.8 63 84.1
Ciclev10023834m.g Citrus clementina HOM05D007265 ORTHO05D009118 1.7e-20 102.1 64 79.7
CsaV3_6G008500 Cucumis sativus L. HOM05D007265 ORTHO05D009118 1.7e-20 102.1 63 82.5
Phvul.006G114500 Phaseolus vulgaris HOM05D007265 ORTHO05D009118 1.7e-20 102.1 63 82.5
Solyc01g096090.4 Solanum lycopersicum HOM05D007265 ORTHO05D009118 2.3e-20 101.7 66 81.8
Sopen01g039810 Solanum pennellii HOM05D007265 ORTHO05D009118 2.3e-20 101.7 66 81.8
THA.LOC104802081 Tarenaya hassleriana HOM05D007265 ORTHO05D009118 2.3e-20 101.7 66 77.3
arahy.Tifrunner.gnm1.ann1.PH1UFL Arachis hypogaea HOM05D007265 ORTHO05D009118 2.9e-20 101.3 60 86.7
Migut.N01534 Erythranthe guttata HOM05D007265 ORTHO05D009118 2.9e-20 101.3 66 77.3
Lj1g0009143 Lotus japonicus HOM05D007265 ORTHO05D009118 2.9e-20 101.3 63 82.5
CANSAT56G3703 Cannabis sativa HOM05D007265 ORTHO05D009118 3.8e-20 100.9 63 82.5
Ca_09518_v3 Cicer arietinum L. HOM05D007265 ORTHO05D009118 6.6e-20 100.1 63 79.4
AT2G46540 Arabidopsis thaliana HOM05D007265 ORTHO05D009118 8.6e-20 99.8 66 77.3
Sp4g28590 Schrenkiella parvula HOM05D007265 ORTHO05D009118 8.6e-20 99.8 66 77.3
THA.LOC104817372 Tarenaya hassleriana HOM05D007265 ORTHO05D009118 8.6e-20 99.8 66 75.8
AL4G45970 Arabidopsis lyrata HOM05D007265 ORTHO05D009118 1.1e-19 99.4 66 75.8
BcaC02g12671 Brassica carinata HOM05D007265 ORTHO05D009118 1.1e-19 99.4 66 77.3
BcaC02g12679 Brassica carinata HOM05D007265 ORTHO05D009118 1.1e-19 99.4 66 77.3
C04p01380 Brassica napus HOM05D007265 ORTHO05D009118 1.1e-19 99.4 66 77.3
BolC4t21791H Brassica oleracea HOM05D007265 ORTHO05D009118 1.1e-19 99.4 66 77.3
BraA05t19124Z Brassica rapa HOM05D007265 ORTHO05D009118 1.1e-19 99.4 66 77.3
HanXRQChr13g0423241 Helianthus annuus HOM05D007265 ORTHO05D009118 1.1e-19 99.4 64 76.6
Manes.01G244801 Manihot esculenta HOM05D007265 ORTHO05D009118 1.1e-19 99.4 63 82.5
arahy.Tifrunner.gnm1.ann1.4N8QKH Arachis hypogaea HOM05D007265 ORTHO05D009118 1.5e-19 99.0 61 83.6
Carub.0004s2926 Capsella rubella HOM05D007265 ORTHO05D009118 1.5e-19 99.0 64 78.1
Medtr7g117700 Medicago truncatula HOM05D007265 ORTHO05D009118 1.9e-19 98.6 63 79.4
HanXRQChr03g0093001 Helianthus annuus HOM05D007265 ORTHO05D009118 2.5e-19 98.2 63 76.2
Potri.002G173101 Populus trichocarpa HOM05D007265 ORTHO05D009118 2.5e-19 98.2 68 75.0
Oeu007878.1 Olea europaea HOM05D007265 ORTHO05D009118 7.2e-19 96.7 55 90.9
BcaC02g07039 Brassica carinata HOM05D007265 ORTHO05D009118 9.5e-19 96.3 66 75.8
Manes.05G021500 Manihot esculenta HOM05D007265 ORTHO05D009118 1.2e-18 95.9 63 79.4
Gorai.008G126400 Gossypium raimondii HOM05D007265 ORTHO05D009118 2.1e-18 95.1 55 87.3
MBI07_g24775_MAGBIO Magnolia biondii HOM05D007265 ORTHO05D009118 2.1e-18 95.1 60 81.7
Sabra02G0140200 Salix brachista HOM05D007265 ORTHO05D009118 2.1e-18 95.1 68 70.6
A04p34450 Brassica napus HOM05D007265 ORTHO05D009118 2.8e-18 94.7 66 74.2
Lsat_1_v5_gn_4_39661 Lactuca sativa HOM05D007265 ORTHO05D009118 2.8e-18 94.7 58 81.0
vmacro13170 Vaccinium macrocarpon HOM05D007265 ORTHO05D009118 2.8e-18 94.7 58 86.2
COL.COLO4_06226 Corchorus olitorius HOM05D007265 ORTHO05D009118 3.6e-18 94.4 54 90.7
Lsat_1_v5_gn_3_126500 Lactuca sativa HOM05D007265 ORTHO05D009118 3.6e-18 94.4 57 82.5
Nn3g18955 Nelumbo nucifera HOM05D007265 ORTHO05D009118 4.7e-18 94.0 64 82.8
Hund16719 Selenicereus undatus HOM05D007265 ORTHO05D009118 4.7e-18 94.0 81 61.7
TWI59G0786 Tripterygium wilfordii HOM05D007265 ORTHO05D009118 4.7e-18 94.0 63 76.2
BraA04t18903Z Brassica rapa HOM05D007265 ORTHO05D009118 1.0e-17 92.8 66 72.7
Sc01g0002550 Simmondsia chinensis HOM05D007265 ORTHO05D009118 1.0e-17 92.8 57 78.9
CARHR141880 Cardamine hirsuta HOM05D007265 ORTHO05D009118 1.4e-17 92.4 66 72.7
Lalb_Chr18g0044541 Lupinus albus HOM05D007265 ORTHO05D009118 1.8e-17 92.0 63 76.2
ClCG06G002640 Citrullus lanatus HOM05D007265 ORTHO05D009118 3.0e-17 91.3 56 80.4
MSTRG.17355 Avicennia marina HOM05D007265 ORTHO05D009118 4.0e-17 90.9 55 85.5
Lalb_Chr15g0076341 Lupinus albus HOM05D007265 ORTHO05D009118 5.2e-17 90.5 63 76.2
BolC4t28709H Brassica oleracea HOM05D007265 ORTHO05D009118 1.2e-16 89.4 66 69.7
SalBow5G3999 Salvia bowleyana HOM05D002476 ORTHO05D002652 1.2e-16 89.4 55 81.8
Rhsim01G0174400 Rhododendron simsii HOM05D007265 ORTHO05D009118 1.5e-16 89.0 82 63.4
Hund27188 Selenicereus undatus HOM05D007265 ORTHO05D009118 2.0e-16 88.6 57 75.4
BcaC02g07016 Brassica carinata HOM05D007265 ORTHO05D009118 3.4e-16 87.8 58 77.6
Psat3g174080 Pisum sativum HOM05D007265 ORTHO05D009118 3.4e-16 87.8 56 80.4
Psat3g001880 Pisum sativum HOM05D007265 ORTHO05D009118 4.4e-16 87.4 52 84.6
EL10Ac1g00247 Beta vulgaris HOM05D007265 ORTHO05D009118 1.7e-15 85.5 55 72.7
A05p01230 Brassica napus HOM05D007265 ORTHO05D009118 2.2e-15 85.1 55 80.0
Aa31LG1G27910 Aethionema arabicum HOM05D007265 ORTHO05D009118 7.0e-14 80.1 54 72.2
AUR62004508 Chenopodium quinoa HOM05D007265 ORTHO05D009118 1.6e-13 79.0 54 68.5
Ah.05g179400 Amaranthus hybridus HOM05D007265 ORTHO05D009118 2.0e-13 78.6 57 68.4
Gorai.007G109700 Gossypium raimondii HOM05D007265 ORTHO05D009118 2.7e-13 78.2 48 83.3
Thhalv10001742m.g Eutrema salsugineum HOM05D007265 ORTHO05D009118 5.9e-13 77.0 114 44.7
BcaNung06658 Brassica carinata HOM05D007265 ORTHO05D009118 2.3e-12 75.1 47 80.9
Os01g0705500 Oryza sativa ssp. japonica HOM05D007265 ORTHO05D009118 2.3e-12 75.1 48 79.2
Nitab4.5_0010712g0030 Nicotiana tabacum HOM05D007265 ORTHO05D009118 5.6e-11 70.5 37 91.9
RcHm_v2.0_Chr1g0360081 Rosa chinensis HOM05D000497 ORTHO05D013080 1.6e-10 68.9 37 89.2
SGA_v2.0_scaffold232G43548 Striga asiatica HOM05D007265 ORTHO05D009118 1.4e-09 65.9 39 84.6
TAR375G0162 Trochodendron aralioides HOM05D007265 ORTHO05D009118 2.9e-07 58.2 45 77.8
AUR62016412 Chenopodium quinoa HOM05D007265 ORTHO05D009118 3.2e-06 54.7 63 44.4
Potri.014G100250 Populus trichocarpa HOM05D007265 ORTHO05D009118 4.1e-06 54.3 42 64.3
FAN10G0450 Fragaria x ananassa HOM05D007283 ORTHO05D013080 9.2e-06 53.1 29 86.2


User provided reference genes

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