Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1915 Punica granatum HOM05D003994 ORTHO05D004957 2.4e-125 452.2 229 100.0
Haze_02136 Corylus avellana HOM05D003994 ORTHO05D004957 1.5e-103 379.8 225 81.8
CiPaw.05G082400 Carya illinoinensis HOM05D003994 ORTHO05D004957 1.9e-103 379.4 225 80.4
FAN20G1157 Fragaria x ananassa HOM05D003994 ORTHO05D004957 1.9e-103 379.4 229 81.2
Cfa005247 Carpinus fangiana HOM05D003994 ORTHO05D004957 3.3e-103 378.6 225 80.9
RcHm_v2.0_Chr7g0224781 Rosa chinensis HOM05D003994 ORTHO05D004957 5.6e-103 377.9 228 79.8
FvH4_2g13710 Fragaria vesca HOM05D003994 ORTHO05D004957 7.4e-103 377.5 229 81.2
FvH4_2g14000 Fragaria vesca HOM05D003994 ORTHO05D004957 7.4e-103 377.5 229 80.8
FAN27G1606 Fragaria x ananassa HOM05D003994 ORTHO05D004957 2.8e-102 375.6 229 80.3
Eucgr.I01421 Eucalyptus grandis HOM05D003994 ORTHO05D004957 8.2e-102 374.0 227 80.6
MD05G1122300 Malus domestica HOM05D003994 ORTHO05D004957 2.4e-101 372.5 228 79.8
CANSAT56G2628 Cannabis sativa HOM05D003994 ORTHO05D004957 6.9e-101 370.9 224 80.4
Prupe.7G263800 Prunus persica HOM05D003994 ORTHO05D004957 9.0e-101 370.5 228 79.4
CANSAT25G2109 Cannabis sativa HOM05D003994 ORTHO05D004957 2.6e-100 369.0 225 79.1
Manes.04G058800 Manihot esculenta HOM05D003994 ORTHO05D004957 2.2e-99 365.9 225 78.7
TWI79G1032 Tripterygium wilfordii HOM05D003994 ORTHO05D004957 3.8e-99 365.2 227 78.0
Duzib052G1000 Durio zibethinus HOM05D003994 ORTHO05D004957 4.9e-99 364.8 225 76.4
CARHR060640 Cardamine hirsuta HOM05D003994 ORTHO05D004957 3.2e-98 362.1 225 76.9
Thhalv10019092m.g Eutrema salsugineum HOM05D003994 ORTHO05D004957 7.1e-98 360.9 225 76.0
BcaC01g00237 Brassica carinata HOM05D003994 ORTHO05D004957 9.3e-98 360.5 224 76.8
THA.LOC104824762 Tarenaya hassleriana HOM05D003994 ORTHO05D004957 1.6e-97 359.8 225 76.9
BolC2t08504H Brassica oleracea HOM05D003994 ORTHO05D004957 2.1e-97 359.4 225 75.6
CSS0048612 Camellia sinensis var. sinensis HOM05D003994 ORTHO05D004957 2.1e-97 359.4 225 78.7
Potri.004G175600 Populus trichocarpa HOM05D003994 ORTHO05D004957 2.1e-97 359.4 227 77.1
A08p24160 Brassica napus HOM05D003994 ORTHO05D004957 2.7e-97 359.0 224 77.7
BraA08t34371Z Brassica rapa HOM05D003994 ORTHO05D004957 2.7e-97 359.0 224 75.9
Lalb_Chr01g0001921 Lupinus albus HOM05D003994 ORTHO05D004957 6.0e-97 357.8 224 76.3
Sp5g23020 Schrenkiella parvula HOM05D003994 ORTHO05D004957 6.0e-97 357.8 225 75.6
CSS0002177 Camellia sinensis var. sinensis HOM05D003994 ORTHO05D004957 7.9e-97 357.5 225 78.2
Atru.chr5.3321 Acer truncatum HOM05D003994 ORTHO05D004957 1.0e-96 357.1 228 75.9
BcaC03g14900 Brassica carinata HOM05D003994 ORTHO05D004957 1.3e-96 356.7 225 75.1
Carub.0002s1448 Capsella rubella HOM05D003994 ORTHO05D004957 1.3e-96 356.7 225 75.6
CiPaw.06G111900 Carya illinoinensis HOM05D003994 ORTHO05D004957 1.3e-96 356.7 221 78.7
Thhalv10026160m.g Eutrema salsugineum HOM05D003994 ORTHO05D004957 1.3e-96 356.7 224 75.9
AL2G26920 Arabidopsis lyrata HOM05D003994 ORTHO05D004957 1.8e-96 356.3 225 75.6
Rhsim12G0069500 Rhododendron simsii HOM05D003994 ORTHO05D004957 1.8e-96 356.3 224 79.5
AT1G68000 Arabidopsis thaliana HOM05D003994 ORTHO05D004957 2.3e-96 355.9 225 75.1
BcaB03g15393 Brassica carinata HOM05D003994 ORTHO05D004957 2.3e-96 355.9 218 78.0
COL.COLO4_17341 Corchorus olitorius HOM05D003994 ORTHO05D004957 2.3e-96 355.9 225 75.6
Gorai.002G198300 Gossypium raimondii HOM05D003994 ORTHO05D004957 2.3e-96 355.9 221 74.7
BcaB05g24329 Brassica carinata HOM05D003994 ORTHO05D004957 3.0e-96 355.5 225 75.1
Duzib248G0985 Durio zibethinus HOM05D003994 ORTHO05D004957 3.9e-96 355.1 225 74.2
Sp7g37200 Schrenkiella parvula HOM05D003994 ORTHO05D004957 8.7e-96 354.0 224 75.9
Thecc.02G059800 Theobroma cacao HOM05D003994 ORTHO05D004957 8.7e-96 354.0 225 74.2
GSVIVG01024019001 Vitis vinifera HOM05D003994 ORTHO05D004957 8.7e-96 354.0 219 79.5
AT4G38570 Arabidopsis thaliana HOM05D003994 ORTHO05D004957 1.1e-95 353.6 217 77.4
A07p32200 Brassica napus HOM05D003994 ORTHO05D004957 1.1e-95 353.6 218 76.6
Ca_19074_v3 Cicer arietinum L. HOM05D003994 ORTHO05D004957 1.5e-95 353.2 225 74.2
BcaB03g15140 Brassica carinata HOM05D003994 ORTHO05D004957 1.9e-95 352.8 222 74.8
Hma1.2p1_0163F.1_g072490 Hydrangea macrophylla HOM05D003994 ORTHO05D004957 1.9e-95 352.8 215 80.0
TPR.G38794 Trifolium pratense HOM05D003994 ORTHO05D004957 1.9e-95 352.8 224 75.4
TPR.G39214 Trifolium pratense HOM05D003994 ORTHO05D004957 1.9e-95 352.8 224 75.0
Potri.009G135500 Populus trichocarpa HOM05D003994 ORTHO05D004957 2.5e-95 352.4 229 76.9
Gohir.D01G159750 Gossypium hirsutum HOM05D003994 ORTHO05D004957 4.3e-95 351.7 221 74.2
Phvul.011G036100 Phaseolus vulgaris HOM05D003994 ORTHO05D004957 4.3e-95 351.7 224 75.4
Glyma.11G091200 Glycine max HOM05D003994 ORTHO05D004957 5.7e-95 351.3 224 75.9
Gohir.A01G168900 Gossypium hirsutum HOM05D003994 ORTHO05D004957 5.7e-95 351.3 221 73.8
Lalb_Chr03g0025191 Lupinus albus HOM05D003994 ORTHO05D004957 5.7e-95 351.3 224 75.4
Dinv41938 Davidia involucrata HOM05D003994 ORTHO05D004957 7.4e-95 350.9 218 79.8
Medtr4g073020 Medicago truncatula HOM05D003994 ORTHO05D004957 7.4e-95 350.9 224 74.6
Aa31LG6G16590 Aethionema arabicum HOM05D003994 ORTHO05D004957 1.3e-94 350.1 224 75.0
C06p37970 Brassica napus HOM05D003994 ORTHO05D004957 1.3e-94 350.1 223 74.9
BcaC08g46004 Brassica carinata HOM05D003994 ORTHO05D004957 1.6e-94 349.7 223 74.9
CsaV3_2G016120 Cucumis sativus L. HOM05D003994 ORTHO05D004957 2.2e-94 349.4 215 78.1
Rhsim05G0056700 Rhododendron simsii HOM05D003994 ORTHO05D004957 2.2e-94 349.4 225 77.8
BolC6t38896H Brassica oleracea HOM05D003994 ORTHO05D004957 6.3e-94 347.8 223 74.4
CAN.G940.12 Capsicum annuum HOM05D003994 ORTHO05D004957 6.3e-94 347.8 218 76.6
Sed0013006 Sechium edule HOM05D003994 ORTHO05D004957 6.3e-94 347.8 215 77.7
ECA234G2975 Erigeron canadensis HOM05D003994 ORTHO05D004957 8.2e-94 347.4 220 76.4
Lalb_Chr19g0139051 Lupinus albus HOM05D003994 ORTHO05D004957 8.2e-94 347.4 224 75.4
HanXRQChr10g0295951 Helianthus annuus HOM05D003994 ORTHO05D004957 1.1e-93 347.1 221 75.1
Solyc08g005985.1 Solanum lycopersicum HOM05D003994 ORTHO05D004957 1.1e-93 347.1 218 77.5
Sopen08g001960 Solanum pennellii HOM05D003994 ORTHO05D004957 1.1e-93 347.1 218 77.5
FAN15G2236 Fragaria x ananassa HOM05D003994 ORTHO05D004957 1.4e-93 346.7 229 75.1
HanXRQChr16g0514761 Helianthus annuus HOM05D003994 ORTHO05D004957 1.4e-93 346.7 220 76.4
MD10G1124800 Malus domestica HOM05D003994 ORTHO05D004957 1.8e-93 346.3 217 77.4
PGSC0003DMG401014852 Solanum tuberosum HOM05D003994 ORTHO05D004957 1.8e-93 346.3 218 77.1
MSTRG.27636 Avicennia marina HOM05D003994 ORTHO05D004957 3.1e-93 345.5 218 77.1
FAN24G3352 Fragaria x ananassa HOM05D003994 ORTHO05D004957 4.1e-93 345.1 229 75.1
Nitab4.5_0001583g0200 Nicotiana tabacum HOM05D003994 ORTHO05D004957 4.1e-93 345.1 218 76.6
Sed0021478 Sechium edule HOM05D003994 ORTHO05D004957 6.9e-93 344.4 215 76.3
Sc08g0002910 Simmondsia chinensis HOM05D003994 ORTHO05D004957 9.0e-93 344.0 222 73.0
Lsat_1_v5_gn_8_167161 Lactuca sativa HOM05D003994 ORTHO05D004957 1.2e-92 343.6 220 75.0
DCAR_025322 Daucus carota HOM05D003994 ORTHO05D004957 1.5e-92 343.2 216 75.9
Nitab4.5_0001225g0220 Nicotiana tabacum HOM05D003994 ORTHO05D004957 1.5e-92 343.2 218 76.1
Nn3g20343 Nelumbo nucifera HOM05D003994 ORTHO05D004957 2.0e-92 342.8 225 73.3
Actinidia00624 Actinidia chinensis HOM05D003994 ORTHO05D004957 3.4e-92 342.0 232 73.7
Hund16215 Selenicereus undatus HOM05D003994 ORTHO05D004957 2.2e-91 339.3 220 74.5
Aqoxy1G00146 Aquilegia oxysepala HOM05D003994 ORTHO05D004957 2.9e-91 339.0 220 74.1
Migut.N01321 Erythranthe guttata HOM05D003994 ORTHO05D004957 3.8e-91 338.6 218 75.7
QL11p050712 Quercus lobata HOM05D003994 ORTHO05D004957 5.0e-91 338.2 225 75.6
SGA_v2.0_scaffold16G07672 Striga asiatica HOM05D003994 ORTHO05D004957 6.5e-91 337.8 218 74.3
TAR629G0599 Trochodendron aralioides HOM05D003994 ORTHO05D004957 8.5e-91 337.4 214 75.7
FAN24G0721 Fragaria x ananassa HOM05D003994 ORTHO05D004957 1.1e-90 337.0 265 65.7
SGA_v2.0_scaffold3G01602 Striga asiatica HOM05D003994 ORTHO05D004957 1.1e-90 337.0 218 73.4
Aqoxy4G01712 Aquilegia oxysepala HOM05D003994 ORTHO05D004957 1.9e-90 336.3 220 73.2
TAR376G0382 Trochodendron aralioides HOM05D003994 ORTHO05D004957 1.9e-90 336.3 214 75.2
Ah.01g023020 Amaranthus hybridus HOM05D003994 ORTHO05D004957 4.2e-90 335.1 226 72.6
Carub.0007s0044 Capsella rubella HOM05D003994 ORTHO05D004957 7.9e-89 330.9 216 74.5
Cc09_g07710 Coffea canephora HOM05D003994 ORTHO05D004957 1.4e-88 330.1 224 72.8
vmacro17345 Vaccinium macrocarpon HOM05D003994 ORTHO05D004957 1.4e-88 330.1 202 80.2
VMungo1127G1708 Vigna mungo HOM05D003994 ORTHO05D004957 1.4e-88 330.1 202 77.2
CARHR294300 Cardamine hirsuta HOM05D003994 ORTHO05D004957 1.8e-88 329.7 201 77.6
C02p23750 Brassica napus HOM05D003994 ORTHO05D004957 2.3e-88 329.3 205 75.6
Sabra04G0117500 Salix brachista HOM05D003994 ORTHO05D004957 2.3e-88 329.3 228 70.6
C03p77150 Brassica napus HOM05D003994 ORTHO05D004957 3.9e-88 328.6 200 77.5
PSO017G2109 Papaver somniferum HOM05D003994 ORTHO05D004957 6.7e-88 327.8 223 70.9
PSO675G5603 Papaver somniferum HOM05D003994 ORTHO05D004957 6.7e-88 327.8 223 70.9
Psat7g138440 Pisum sativum HOM05D003994 ORTHO05D004957 2.5e-87 325.9 210 73.8
MELO3C020821.2 Cucumis melo HOM05D003994 ORTHO05D004957 8.2e-86 320.9 228 70.6
A02p14650 Brassica napus HOM05D003994 ORTHO05D004957 1.1e-85 320.5 208 74.0
BraA02t06532Z Brassica rapa HOM05D003994 ORTHO05D004957 1.1e-85 320.5 208 74.0
Lj3g0010701 Lotus japonicus HOM05D003994 ORTHO05D004957 2.4e-85 319.3 207 72.0
A07p34510 Brassica napus HOM05D003994 ORTHO05D004957 5.3e-85 318.2 201 75.6
Oeu061402.1 Olea europaea HOM05D003994 ORTHO05D004957 6.9e-85 317.8 202 76.7
SalBow3G1772 Salvia bowleyana HOM05D003994 ORTHO05D004957 2.0e-84 316.2 225 69.3
Glyma.12G033500 Glycine max HOM05D003994 ORTHO05D004957 2.6e-84 315.8 200 76.5
Oeu005708.1 Olea europaea HOM05D003994 ORTHO05D004957 1.7e-83 313.2 204 75.0
PGR142G1861 Punica granatum HOM05D003994 ORTHO05D004957 2.2e-83 312.8 224 70.1
AUR62037910 Chenopodium quinoa HOM05D003994 ORTHO05D004957 5.0e-83 311.6 208 72.1
Sabra09G0105200 Salix brachista HOM05D003994 ORTHO05D004957 5.0e-83 311.6 249 65.5
ClCG02G011950 Citrullus lanatus HOM05D003994 ORTHO05D004957 5.5e-82 308.1 220 70.0
EL10Ac9g21377 Beta vulgaris HOM05D003994 ORTHO05D004957 1.2e-81 307.0 201 73.6
AUR62040162 Chenopodium quinoa HOM05D003994 ORTHO05D004957 3.0e-80 302.4 218 67.9
unitig_749.g13986 Utricularia gibba HOM05D003994 ORTHO05D004957 3.1e-77 292.4 202 68.8
Lsat_1_v5_gn_5_108021 Lactuca sativa HOM05D003994 ORTHO05D004957 5.3e-77 291.6 186 76.3
Dinv43046 Davidia involucrata HOM05D003225 ORTHO05D003818 7.0e-77 291.2 193 74.6
Os02g0123600 Oryza sativa ssp. japonica HOM05D003994 ORTHO05D004957 7.0e-77 291.2 210 64.8
HPP92_004513 Vanilla planifolia HOM05D003994 ORTHO05D004957 2.6e-76 289.3 197 70.1
CDE05G3005 Ceratophyllum demersum HOM05D003994 ORTHO05D004957 4.5e-76 288.5 214 69.2
Zm00001eb274200 Zea mays HOM05D003994 ORTHO05D004957 7.7e-76 287.7 212 63.7
ATR0307G066 Amborella trichopoda HOM05D003994 ORTHO05D004957 1.1e-74 283.9 213 65.7
arahy.Tifrunner.gnm1.ann1.U045QQ Arachis hypogaea HOM05D003994 ORTHO05D004957 8.8e-72 274.2 173 76.3
MBI02_g21865_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 5.7e-71 271.6 220 64.5
arahy.Tifrunner.gnm1.ann1.VZUK08 Arachis hypogaea HOM05D003994 ORTHO05D004957 1.1e-69 267.3 210 64.8
EL10Ac7g18178 Beta vulgaris HOM05D003994 ORTHO05D004957 1.8e-69 266.5 218 62.4
SalBow3G2361 Salvia bowleyana HOM05D003994 ORTHO05D004957 1.6e-68 263.5 231 60.2
SHI32381 Sapria himalayana HOM05D003994 ORTHO05D004957 7.7e-68 261.2 224 59.8
BolC3t19967H Brassica oleracea HOM05D003994 ORTHO05D004957 5.0e-67 258.5 201 65.2
Peaxi162Scf00045g00144 Petunia axillaris HOM05D003994 ORTHO05D004957 5.5e-66 255.0 218 60.1
SGA_v2.0_scaffold243G44305 Striga asiatica HOM05D003994 ORTHO05D004957 9.4e-66 254.2 196 65.3
Lj5C178T13 Lonicera japonica HOM05D003994 ORTHO05D004957 1.2e-65 253.8 159 78.6
arahy.Tifrunner.gnm1.ann1.L07Y4L Arachis hypogaea HOM05D003994 ORTHO05D004957 2.7e-65 252.7 203 63.1
CDE05G1389 Ceratophyllum demersum HOM05D003994 ORTHO05D004957 1.4e-64 250.4 214 63.1
C03p25490 Brassica napus HOM05D003994 ORTHO05D004957 3.0e-64 249.2 157 77.1
Mapoly0071s0023 Marchantia polymorpha HOM05D003994 ORTHO05D004957 3.4e-63 245.7 211 59.7
Cpa.g.sc37.130 Carica papaya HOM05D003994 ORTHO05D004957 5.7e-63 245.0 149 81.2
SMO112G0024 Selaginella moellendorffii HOM05D003994 ORTHO05D004957 1.4e-61 240.4 220 57.3
Zm00001eb389940 Zea mays HOM05D003994 ORTHO05D004957 1.2e-60 237.3 212 56.1
FAN15G2231 Fragaria x ananassa HOM05D003994 ORTHO05D004957 1.0e-59 234.2 229 57.6
Pp3c3_18340 Physcomitrium patens HOM05D003994 ORTHO05D004957 1.1e-58 230.7 225 53.3
SalBow5G5214 Salvia bowleyana HOM05D003994 ORTHO05D004957 1.5e-58 230.3 186 64.5
BolC6t39228H Brassica oleracea HOM05D000212 ORTHO05D005509 5.5e-58 228.4 152 75.0
Pp3c4_10100 Physcomitrium patens HOM05D003994 ORTHO05D004957 4.7e-57 225.3 217 54.8
CBR_g32608 Chara braunii HOM05D003994 ORTHO05D004957 2.2e-54 216.5 211 54.0
Cre10.g419800 Chlamydomonas reinhardtii HOM05D003994 ORTHO05D004957 5.9e-44 181.8 237 45.1
C06p42000 Brassica napus HOM05D000573 ORTHO05D005509 4.3e-42 175.6 181 56.4
BcaC08g46226 Brassica carinata HOM05D003994 ORTHO05D004957 7.3e-42 174.9 117 75.2
MCO09G063 Micromonas commoda HOM05D003994 ORTHO05D004957 2.9e-38 162.9 235 42.6
AL7G10460 Arabidopsis lyrata HOM05D003994 ORTHO05D004957 4.9e-38 162.2 102 73.5
MBI11_g13142_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 4.1e-37 159.1 220 44.1
arahy.Tifrunner.gnm1.ann1.NCR277 Arachis hypogaea HOM05D003994 ORTHO05D004957 2.7e-36 156.4 109 67.9
PRCOL_00004558 Prasinoderma coloniale HOM05D003994 ORTHO05D004957 7.8e-36 154.8 215 42.8
arahy.Tifrunner.gnm1.ann1.8L0F4Y Arachis hypogaea HOM05D003994 ORTHO05D004957 1.0e-35 154.5 94 78.7
BcaNung05108 Brassica carinata HOM05D003994 ORTHO05D004957 3.1e-32 142.9 119 65.5
FAN27G1783 Fragaria x ananassa HOM05D003994 ORTHO05D004957 5.2e-32 142.1 122 63.1
RcHm_v2.0_Chr5g0023251 Rosa chinensis HOM05D003994 ORTHO05D004957 1.3e-27 127.5 78 80.8
Cfa022653 Carpinus fangiana HOM05D003994 ORTHO05D004957 6.6e-27 125.2 235 32.8
MD08G1201300 Malus domestica HOM05D003994 ORTHO05D036609 4.9e-22 109.0 79 65.8
MD16G1270800 Malus domestica HOM05D003994 ORTHO05D036609 1.3e-19 100.9 83 60.2
MBI11_g33763_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 6.2e-17 92.0 70 65.7
Pp3c10_9870 Physcomitrium patens HOM05D003994 ORTHO05D310819 5.8e-15 85.5 201 30.8
THA.LOC104807810 Tarenaya hassleriana HOM05D003994 ORTHO05D004957 1.0e-11 74.7 105 42.9
arahy.Tifrunner.gnm1.ann1.B18QXV Arachis hypogaea HOM05D003994 ORTHO05D086742 3.1e-08 63.2 77 51.9
Os06g0492000 Oryza sativa ssp. japonica HOM05D003994 ORTHO05D036609 9.0e-08 61.6 40 62.5
CBR_g3510 Chara braunii HOM05D003994 ORTHO05D043992 1.3e-06 57.8 71 45.1
arahy.Tifrunner.gnm1.ann1.VLQ3S7 Arachis hypogaea HOM05D001805 ORTHO05D001734 6.4e-06 55.5 38 68.4


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