Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1889 Punica granatum HOM05D007551 ORTHO05D009424 3.1e-151 540.0 279 100.0
FvH4_5g24430 Fragaria vesca HOM05D007551 ORTHO05D009424 6.0e-70 270.0 278 52.2
Prupe.3G018200 Prunus persica HOM05D007551 ORTHO05D009424 1.6e-67 261.9 251 54.2
Cfa012637 Carpinus fangiana HOM05D007551 ORTHO05D009424 6.2e-67 260.0 235 56.2
FAN13G0867 Fragaria x ananassa HOM05D007551 ORTHO05D009424 1.8e-66 258.5 284 50.4
CiPaw.12G053700 Carya illinoinensis HOM05D007551 ORTHO05D009424 1.2e-65 255.8 245 55.1
Hma1.2p1_0294F.1_g116420 Hydrangea macrophylla HOM05D007551 ORTHO05D009424 4.9e-64 250.4 285 49.1
TAR362G0203 Trochodendron aralioides HOM05D007551 ORTHO05D009424 1.1e-63 249.2 244 56.6
Atru.chr6.2125 Acer truncatum HOM05D007551 ORTHO05D009424 1.4e-63 248.8 230 55.2
GSVIVG01036918001 Vitis vinifera HOM05D007551 ORTHO05D009424 5.4e-63 246.9 267 51.3
Ciclev10000274m.g Citrus clementina HOM05D007551 ORTHO05D009424 9.3e-63 246.1 232 55.6
RcHm_v2.0_Chr7g0214821 Rosa chinensis HOM05D007551 ORTHO05D009424 9.3e-63 246.1 248 51.2
Thecc.03G322800 Theobroma cacao HOM05D007551 ORTHO05D009424 9.3e-63 246.1 235 55.3
QL11p054679 Quercus lobata HOM05D007551 ORTHO05D009424 1.2e-62 245.7 283 50.9
Dinv37453 Davidia involucrata HOM05D007551 ORTHO05D009424 3.5e-62 244.2 281 49.1
COL.COLO4_16723 Corchorus olitorius HOM05D007551 ORTHO05D009424 3.9e-61 240.7 235 54.0
MD06G1022200 Malus domestica HOM05D007551 ORTHO05D009424 5.1e-61 240.4 274 48.9
TAR633G1897 Trochodendron aralioides HOM05D007551 ORTHO05D009424 1.3e-59 235.7 233 54.9
ClCG07G011220 Citrullus lanatus HOM05D007551 ORTHO05D009424 8.1e-59 233.0 275 50.5
Sed0011000 Sechium edule HOM05D007551 ORTHO05D009424 1.5e-57 228.8 275 49.5
Rhsim04G0146500 Rhododendron simsii HOM05D007551 ORTHO05D009424 2.6e-57 228.0 239 52.3
Gohir.A12G200366 Gossypium hirsutum HOM05D007551 ORTHO05D009424 3.4e-57 227.6 275 48.0
Gorai.N026600 Gossypium raimondii HOM05D007551 ORTHO05D009424 5.8e-57 226.9 275 48.4
Haze_08024 Corylus avellana HOM05D007551 ORTHO05D009424 1.7e-56 225.3 203 55.2
Eucgr.E01036 Eucalyptus grandis HOM05D007551 ORTHO05D009424 2.2e-56 224.9 261 48.7
TWI60G1073 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 3.8e-56 224.2 269 48.7
TWI34G0706 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 4.9e-56 223.8 272 50.0
FvH4_4g10440 Fragaria vesca HOM05D007551 ORTHO05D009424 6.4e-56 223.4 250 46.8
Sed0007434 Sechium edule HOM05D007551 ORTHO05D009424 6.4e-56 223.4 269 49.1
FvH4_4g10410 Fragaria vesca HOM05D007551 ORTHO05D009424 8.4e-56 223.0 250 46.8
Nn1g00676 Nelumbo nucifera HOM05D007551 ORTHO05D009424 5.4e-55 220.3 232 50.0
Gohir.D12G203200 Gossypium hirsutum HOM05D007551 ORTHO05D009424 2.1e-54 218.4 275 46.9
Nn6g33703 Nelumbo nucifera HOM05D007551 ORTHO05D009424 3.5e-54 217.6 231 49.8
MELO3C016242.2 Cucumis melo HOM05D007551 ORTHO05D009424 4.6e-54 217.2 274 49.6
CsaV3_4G007030 Cucumis sativus L. HOM05D007551 ORTHO05D009424 4.6e-54 217.2 275 48.0
RcHm_v2.0_Chr4g0405931 Rosa chinensis HOM05D007551 ORTHO05D009424 1.3e-53 215.7 256 46.5
Lsat_1_v5_gn_6_75081 Lactuca sativa HOM05D007551 ORTHO05D009424 1.3e-51 209.1 272 44.1
Solyc11g005940.3 Solanum lycopersicum HOM05D007551 ORTHO05D009424 1.3e-51 209.1 243 48.1
Sc07g0008330 Simmondsia chinensis HOM05D007551 ORTHO05D009424 2.1e-51 208.4 237 46.8
Sopen11g001880 Solanum pennellii HOM05D007551 ORTHO05D009424 1.1e-50 206.1 247 47.8
RcHm_v2.0_Chr7g0219861 Rosa chinensis HOM05D007551 ORTHO05D009424 3.1e-50 204.5 281 42.7
Peaxi162Scf00619g00022 Petunia axillaris HOM05D007551 ORTHO05D009424 4.0e-50 204.1 236 46.2
Nitab4.5_0000856g0020 Nicotiana tabacum HOM05D007551 ORTHO05D009424 6.9e-50 203.4 269 44.6
PGSC0003DMG402028683 Solanum tuberosum HOM05D007551 ORTHO05D009424 1.5e-49 202.2 243 46.1
EL10Ac5g11872 Beta vulgaris HOM05D007551 ORTHO05D009424 4.5e-49 200.7 253 47.4
Potri.003G105700 Populus trichocarpa HOM05D007551 ORTHO05D009424 5.8e-49 200.3 232 48.7
Nitab4.5_0002667g0100 Nicotiana tabacum HOM05D007551 ORTHO05D009424 9.9e-49 199.5 269 43.1
Ah.12g056170 Amaranthus hybridus HOM05D000351 ORTHO05D009424 1.3e-48 199.1 250 47.6
Carub.0007s2177 Capsella rubella HOM05D007551 ORTHO05D009424 1.7e-48 198.7 244 46.7
Thhalv10024401m.g Eutrema salsugineum HOM05D007551 ORTHO05D009424 6.4e-48 196.8 240 45.4
CAN.G652.9 Capsicum annuum HOM05D007551 ORTHO05D009424 1.1e-47 196.1 262 45.0
AL7G34670 Arabidopsis lyrata HOM05D007551 ORTHO05D009424 1.4e-47 195.7 234 46.2
Aa31LG6G2050 Aethionema arabicum HOM05D007551 ORTHO05D009424 1.9e-47 195.3 241 45.2
Sabra03G0072700 Salix brachista HOM05D007551 ORTHO05D009424 4.2e-47 194.1 231 48.9
AT4G19440 Arabidopsis thaliana HOM05D007551 ORTHO05D009424 7.1e-47 193.4 239 44.8
Oeu040609.1 Olea europaea HOM05D007551 ORTHO05D009424 7.1e-47 193.4 230 49.6
MBI13_g36729_MAGBIO Magnolia biondii HOM05D007551 ORTHO05D009424 1.6e-46 192.2 224 47.3
Oeu029773.2 Olea europaea HOM05D007551 ORTHO05D009424 1.3e-45 189.1 291 43.6
Manes.17G006200 Manihot esculenta HOM05D007551 ORTHO05D009424 1.8e-45 188.7 224 48.7
Migut.E01387 Erythranthe guttata HOM05D007551 ORTHO05D009424 2.3e-45 188.3 271 45.8
Lj4g0019089 Lotus japonicus HOM05D007551 ORTHO05D009424 2.3e-45 188.3 241 45.6
MSTRG.1750 Avicennia marina HOM05D007551 ORTHO05D009424 5.1e-45 187.2 296 42.2
Lalb_Chr09g0334421 Lupinus albus HOM05D007551 ORTHO05D009424 5.1e-45 187.2 242 44.6
VMungo0251G2062 Vigna mungo HOM05D007551 ORTHO05D009424 9.6e-44 183.0 286 39.5
Sp7g18060 Schrenkiella parvula HOM05D007551 ORTHO05D009424 1.3e-43 182.6 275 40.0
Cc00_g20060 Coffea canephora HOM05D007551 ORTHO05D009424 3.7e-43 181.0 266 45.1
BcaB03g11619 Brassica carinata HOM05D007551 ORTHO05D009424 4.8e-43 180.6 237 43.0
SGA_v2.0_scaffold121G33050 Striga asiatica HOM05D007551 ORTHO05D009424 1.1e-42 179.5 284 41.5
SalBow1G3247 Salvia bowleyana HOM05D007551 ORTHO05D009424 1.8e-42 178.7 290 41.4
SalBow8G4006 Salvia bowleyana HOM05D007551 ORTHO05D009424 1.8e-42 178.7 290 41.4
PSO210G4217 Papaver somniferum HOM05D007551 ORTHO05D009424 4.0e-42 177.6 258 41.1
PSO210G5788 Papaver somniferum HOM05D007551 ORTHO05D009424 1.2e-41 176.0 239 42.7
Glyma.16G058700 Glycine max HOM05D007551 ORTHO05D009424 1.5e-41 175.6 231 42.9
Phvul.003G277400 Phaseolus vulgaris HOM05D007551 ORTHO05D009424 7.6e-41 173.3 232 43.5
Cpa.g.c44844 Carica papaya HOM05D007551 ORTHO05D009424 3.2e-39 167.9 161 55.3
Aqoxy2G03897 Aquilegia oxysepala HOM05D007551 ORTHO05D009424 6.7e-37 160.2 178 51.7
AUR62044750 Chenopodium quinoa HOM05D007551 ORTHO05D009424 4.8e-35 154.1 170 47.1
FAN04G0939 Fragaria x ananassa HOM05D007551 ORTHO05D009424 1.1e-34 152.9 285 37.5
ECA240G1023 Erigeron canadensis HOM05D000046 ORTHO05D000457 1.8e-34 152.1 202 40.6
CARHR226230 Cardamine hirsuta HOM05D007551 ORTHO05D009424 3.2e-31 141.4 249 39.0
Medtr8g071970 Medicago truncatula HOM05D007551 ORTHO05D009424 3.2e-31 141.4 229 38.4
Psat4g109680 Pisum sativum HOM05D007551 ORTHO05D009424 1.6e-30 139.0 179 45.3
TPR.G16813 Trifolium pratense HOM05D007551 ORTHO05D009424 1.6e-30 139.0 197 40.6
CSS0048505 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 2.7e-30 138.3 124 53.2
Cpa.g.sc3.432 Carica papaya HOM05D007551 ORTHO05D009424 2.7e-30 138.3 122 53.3
CSS0008559 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 7.9e-30 136.7 124 52.4
BolC3t20473H Brassica oleracea HOM05D007551 ORTHO05D009424 1.8e-29 135.6 199 41.2
HPP92_013860 Vanilla planifolia HOM05D007551 ORTHO05D009424 2.3e-29 135.2 253 36.4
C03p81990 Brassica napus HOM05D007551 ORTHO05D009424 1.6e-27 129.0 199 39.7
Lj8C372G5 Lonicera japonica HOM05D007551 ORTHO05D009424 1.6e-27 129.0 113 54.9
Oeu044967.1 Olea europaea HOM05D007551 ORTHO05D009424 2.5e-20 105.1 128 44.5
Lalb_Chr05g0229381 Lupinus albus HOM05D007551 ORTHO05D009424 1.5e-17 95.9 163 35.0
MD16G1287400 Malus domestica HOM05D007551 ORTHO05D009424 1.0e-13 83.2 68 55.9
ATR0626G221 Amborella trichopoda HOM05D007551 ORTHO05D009424 2.3e-13 82.0 224 33.5
HPP92_013845 Vanilla planifolia HOM05D007551 ORTHO05D009424 5.1e-13 80.9 102 38.2
SalBow8G0178 Salvia bowleyana HOM05D007551 ORTHO05D009424 1.1e-12 79.7 78 52.6
FAN17G3133 Fragaria x ananassa HOM05D007551 ORTHO05D009424 1.1e-10 73.2 115 33.0
TAR623G1496 Trochodendron aralioides HOM05D007750 ORTHO05D009803 1.0e-08 66.6 190 28.4
Cc00_g12250 Coffea canephora HOM05D005764 ORTHO05D006600 1.7e-08 65.9 206 25.2
GSVIVG01024955001 Vitis vinifera HOM05D007750 ORTHO05D009803 2.9e-08 65.1 173 29.5
Nitab4.5_0000663g0160 Nicotiana tabacum HOM05D005764 ORTHO05D006600 8.5e-08 63.5 209 25.8
Ca_22472_v3 Cicer arietinum L. HOM05D007551 ORTHO05D009424 1.5e-07 62.8 92 35.9
MBI14_g36920_MAGBIO Magnolia biondii HOM05D002509 ORTHO05D002758 2.5e-07 62.0 172 29.1
Nitab4.5_0008892g0030 Nicotiana tabacum HOM05D005764 ORTHO05D006600 4.2e-07 61.2 209 26.3
Ciclev10010938m.g Citrus clementina HOM05D005764 ORTHO05D006600 9.4e-07 60.1 191 26.2
Oeu039576.1 Olea europaea HOM05D007455 ORTHO05D009431 1.2e-06 59.7 172 25.6
Potri.001G236800 Populus trichocarpa HOM05D007212 ORTHO05D009094 1.6e-06 59.3 203 27.1
Ciclev10030383m.g Citrus clementina HOM05D000855 ORTHO05D000003 2.1e-06 58.9 128 28.1
Dinv18433 Davidia involucrata HOM05D005764 ORTHO05D006600 2.1e-06 58.9 192 27.6
CDE02G4345 Ceratophyllum demersum HOM05D006080 ORTHO05D007382 4.7e-06 57.8 204 27.5
TAR362G1049 Trochodendron aralioides HOM05D005764 ORTHO05D006600 4.7e-06 57.8 183 27.9
Cc10_g03430 Coffea canephora HOM05D007639 ORTHO05D009509 6.1e-06 57.4 185 27.0
THA.LOC104801704 Tarenaya hassleriana HOM05D007750 ORTHO05D009803 6.1e-06 57.4 179 22.9
CDE09G0292 Ceratophyllum demersum HOM05D007212 ORTHO05D009094 8.0e-06 57.0 185 24.9
Oeu032258.1 Olea europaea HOM05D007291 ORTHO05D009038 8.0e-06 57.0 193 24.4


User provided reference genes

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