Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 1.3e-45 186.0 95 100.0
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 7.7e-38 160.2 95 85.3
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 2.2e-37 158.7 95 82.1
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 5.0e-37 157.5 95 81.1
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 1.4e-36 156.0 95 81.1
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 1.9e-36 155.6 95 80.0
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 2.5e-36 155.2 85 88.2
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 3.2e-36 154.8 95 82.1
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 7.2e-36 153.7 94 80.9
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 1.6e-35 152.5 95 78.9
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 2.7e-35 151.8 93 80.6
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 3.6e-35 151.4 95 80.0
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 4.7e-35 151.0 94 81.9
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 7.9e-35 150.2 96 78.1
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 7.9e-35 150.2 88 83.0
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 1.0e-34 149.8 89 83.1
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 1.4e-34 149.4 95 83.2
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 1.4e-34 149.4 90 81.1
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 1.8e-34 149.1 84 85.7
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 2.3e-34 148.7 95 77.9
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 2.3e-34 148.7 95 76.8
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 2.3e-34 148.7 87 83.9
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 2.3e-34 148.7 93 80.6
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 3.0e-34 148.3 86 87.2
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 3.0e-34 148.3 86 87.2
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 3.0e-34 148.3 84 85.7
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 3.9e-34 147.9 86 81.4
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 3.9e-34 147.9 88 83.0
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 3.9e-34 147.9 88 83.0
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 3.9e-34 147.9 96 80.2
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 3.9e-34 147.9 95 80.0
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 5.2e-34 147.5 87 83.9
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 5.2e-34 147.5 86 87.2
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 6.7e-34 147.1 90 80.0
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 6.7e-34 147.1 94 74.5
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 1.1e-33 146.4 90 82.2
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 1.1e-33 146.4 84 82.1
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.5e-33 146.0 87 80.5
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.5e-33 146.0 87 80.5
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 1.5e-33 146.0 83 83.1
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 1.5e-33 146.0 84 86.9
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 2.0e-33 145.6 86 84.9
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.0e-33 145.6 86 80.2
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 2.6e-33 145.2 83 85.5
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 2.6e-33 145.2 86 81.4
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 3.3e-33 144.8 95 73.7
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 3.3e-33 144.8 85 81.2
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 3.3e-33 144.8 95 76.8
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 4.4e-33 144.4 86 80.2
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 4.4e-33 144.4 95 75.8
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 4.4e-33 144.4 95 75.8
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 4.4e-33 144.4 88 78.4
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 5.7e-33 144.1 84 86.9
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 5.7e-33 144.1 94 77.7
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 7.4e-33 143.7 86 84.9
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 7.4e-33 143.7 92 77.2
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 9.7e-33 143.3 85 81.2
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 9.7e-33 143.3 95 72.6
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 1.3e-32 142.9 90 80.0
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 1.7e-32 142.5 93 76.3
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.7e-32 142.5 88 80.7
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 1.7e-32 142.5 94 76.6
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.2e-32 142.1 93 73.1
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 2.8e-32 141.7 91 76.9
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 4.8e-32 141.0 84 84.5
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 8.2e-32 140.2 86 75.6
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 1.1e-31 139.8 83 79.5
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 1.8e-31 139.0 83 80.7
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 2.4e-31 138.7 90 72.2
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 2.4e-31 138.7 96 75.0
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 3.1e-31 138.3 79 82.3
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 5.3e-31 137.5 80 77.5
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 9.1e-31 136.7 110 66.4
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.2e-30 136.3 90 70.0
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.2e-30 136.3 90 70.0
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 1.2e-30 136.3 90 70.0
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 1.2e-30 136.3 86 73.3
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 1.2e-30 136.3 82 79.3
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 2.0e-30 135.6 84 73.8
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 4.5e-30 134.4 93 73.1
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 5.9e-30 134.0 78 87.2
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 5.9e-30 134.0 94 67.0
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 1.0e-29 133.3 84 72.6
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 1.0e-29 133.3 84 72.6
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 1.0e-29 133.3 84 72.6
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 1.7e-29 132.5 89 70.8
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 1.7e-29 132.5 98 66.3
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 2.2e-29 132.1 84 72.6
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.2e-29 132.1 99 68.7
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 3.8e-29 131.3 85 72.9
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 3.8e-29 131.3 97 72.2
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 6.5e-29 130.6 113 61.1
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 6.5e-29 130.6 87 72.4
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 8.5e-29 130.2 119 60.5
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 1.1e-28 129.8 90 67.8
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 1.5e-28 129.4 90 67.8
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 1.5e-28 129.4 90 67.8
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 1.5e-28 129.4 90 67.8
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 1.5e-28 129.4 90 67.8
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 1.5e-28 129.4 90 67.8
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 1.5e-28 129.4 81 76.5
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 3.2e-28 128.3 82 73.2
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 4.2e-28 127.9 85 70.6
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 7.2e-28 127.1 78 74.4
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 9.4e-28 126.7 86 68.6
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 2.1e-27 125.6 84 81.0
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 2.7e-27 125.2 82 73.2
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 3.6e-27 124.8 67 89.6
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 6.1e-27 124.0 73 86.3
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 1.0e-26 123.2 81 79.0
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 3.0e-26 121.7 79 75.9
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 4.0e-26 121.3 79 77.2
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 4.0e-26 121.3 85 67.1
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 5.2e-26 120.9 77 75.3
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.2e-25 119.8 79 74.7
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 9.7e-25 116.7 67 80.6
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 1.8e-23 112.5 66 78.8
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 6.5e-21 104.0 71 70.4
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 1.2e-19 99.8 95 61.1
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 1.4e-18 96.3 77 59.7
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 5.2e-18 94.4 55 89.1
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 3.4e-17 91.7 80 61.2
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 7.7e-14 80.5 47 76.6
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 1.0e-13 80.1 62 59.7
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 6.5e-13 77.4 62 54.8
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 1.9e-12 75.9 60 63.3
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 1.4e-10 69.7 60 53.3
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 3.0e-10 68.6 62 56.5
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 2.8e-08 62.0 48 60.4
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 2.8e-08 62.0 48 60.4
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 2.8e-08 62.0 48 60.4


User provided reference genes

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