Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1731 Punica granatum HOM05D007498 ORTHO05D009384 1.9e-210 735.7 397 100.0
Eucgr.A01096 Eucalyptus grandis HOM05D007498 ORTHO05D009384 5.9e-132 474.9 402 65.4
Dinv08726 Davidia involucrata HOM05D007498 ORTHO05D009384 4.2e-130 468.8 360 66.7
CiPaw.03G155900 Carya illinoinensis HOM05D007498 ORTHO05D009384 4.8e-126 455.3 395 62.0
CSS0038240 Camellia sinensis var. sinensis HOM05D007498 ORTHO05D009384 1.6e-124 450.3 392 62.0
GSVIVG01030496001 Vitis vinifera HOM05D007498 ORTHO05D009384 1.7e-123 446.8 395 61.8
TAR629G3061 Trochodendron aralioides HOM05D007498 ORTHO05D009384 2.9e-123 446.0 397 61.7
Hma1.2p1_0445F.1_g154420 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 2.3e-120 436.4 361 62.9
Hma1.2p1_2381F.1_g320980 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 2.3e-120 436.4 361 62.9
TWI18G0826 Tripterygium wilfordii HOM05D007498 ORTHO05D009384 3.0e-120 436.0 393 59.8
QL08p030918 Quercus lobata HOM05D007498 ORTHO05D009384 5.2e-120 435.3 385 63.1
Thecc.01G181300 Theobroma cacao HOM05D007498 ORTHO05D009384 8.8e-120 434.5 394 60.4
COL.COLO4_21864 Corchorus olitorius HOM05D007498 ORTHO05D009384 2.6e-119 433.0 393 59.8
Manes.12G070200 Manihot esculenta HOM05D007498 ORTHO05D009384 7.5e-119 431.4 396 59.3
Ciclev10015493m.g Citrus clementina HOM05D007498 ORTHO05D009384 6.3e-118 428.3 396 60.9
CANSAT64G1398 Cannabis sativa HOM05D007498 ORTHO05D009384 9.1e-117 424.5 361 62.0
Rhsim09G0054300 Rhododendron simsii HOM05D007498 ORTHO05D009384 1.1e-114 417.5 407 57.5
Actinidia13735 Actinidia chinensis HOM05D007498 ORTHO05D009384 1.5e-114 417.2 391 59.3
Rhsim06G0166900 Rhododendron simsii HOM05D007498 ORTHO05D009384 3.2e-114 416.0 432 55.1
AL3G43270 Arabidopsis lyrata HOM05D007498 ORTHO05D009384 9.4e-114 414.5 401 58.9
AT2G05755 Arabidopsis thaliana HOM05D007498 ORTHO05D009384 1.6e-113 413.7 401 58.9
Gorai.001G216600 Gossypium raimondii HOM05D007498 ORTHO05D009384 2.7e-113 412.9 358 60.6
Cc05_g03070 Coffea canephora HOM05D007498 ORTHO05D009384 3.6e-113 412.5 360 57.8
A03p44690 Brassica napus HOM05D007498 ORTHO05D009384 6.1e-113 411.8 397 58.7
PSO541G2474 Papaver somniferum HOM05D007498 ORTHO05D009384 6.1e-113 411.8 360 60.8
Sc21g0001170 Simmondsia chinensis HOM05D007498 ORTHO05D009384 8.0e-113 411.4 366 59.3
CARHR103340 Cardamine hirsuta HOM05D007498 ORTHO05D009384 1.4e-112 410.6 399 57.4
Prupe.3G211200 Prunus persica HOM05D007498 ORTHO05D009384 1.8e-112 410.2 393 56.0
Actinidia09741 Actinidia chinensis HOM05D007498 ORTHO05D009384 5.2e-112 408.7 360 60.6
Gohir.A07G187000 Gossypium hirsutum HOM05D007498 ORTHO05D009384 6.8e-112 408.3 387 59.4
Carub.0003s2696 Capsella rubella HOM05D007498 ORTHO05D009384 8.8e-112 407.9 400 57.0
BcaC01g03153 Brassica carinata HOM05D007498 ORTHO05D009384 1.5e-111 407.1 397 57.9
C03p55520 Brassica napus HOM05D007498 ORTHO05D009384 1.5e-111 407.1 397 57.7
Sp3g24210 Schrenkiella parvula HOM05D007498 ORTHO05D009384 2.0e-111 406.8 398 59.3
Sabra14G0119400 Salix brachista HOM05D007498 ORTHO05D009384 2.6e-111 406.4 414 55.3
Nitab4.5_0006063g0010 Nicotiana tabacum HOM05D007498 ORTHO05D009384 3.4e-111 406.0 363 59.2
BcaB08g34508 Brassica carinata HOM05D007498 ORTHO05D009384 5.7e-111 405.2 397 58.2
PSO675G1300 Papaver somniferum HOM05D007498 ORTHO05D009384 7.5e-111 404.8 389 57.3
BraA03t13603Z Brassica rapa HOM05D007498 ORTHO05D009384 9.8e-111 404.4 410 56.3
BolC3t17828H Brassica oleracea HOM05D000228 ORTHO05D001122 4.8e-110 402.1 410 55.9
Lj6g0022389 Lotus japonicus HOM05D007498 ORTHO05D009384 4.8e-110 402.1 396 55.6
Nn1g03383 Nelumbo nucifera HOM05D007498 ORTHO05D009384 1.8e-109 400.2 383 57.7
RcHm_v2.0_Chr2g0158311 Rosa chinensis HOM05D007498 ORTHO05D009384 3.1e-109 399.4 393 56.0
Sopen05g026100 Solanum pennellii HOM05D007498 ORTHO05D009384 5.4e-109 398.7 407 53.8
Medtr3g080260 Medicago truncatula HOM05D007498 ORTHO05D009384 7.0e-109 398.3 399 54.6
MD17G1103400 Malus domestica HOM05D007498 ORTHO05D009384 3.5e-108 396.0 395 55.4
Solyc05g042050.4 Solanum lycopersicum HOM05D007498 ORTHO05D009384 5.9e-108 395.2 407 53.6
THA.LOC104815344 Tarenaya hassleriana HOM05D007498 ORTHO05D009384 5.9e-108 395.2 397 55.9
Nitab4.5_0000019g0370 Nicotiana tabacum HOM05D007498 ORTHO05D009384 1.0e-107 394.4 352 58.8
vmacro12166 Vaccinium macrocarpon HOM05D007498 ORTHO05D009384 1.7e-107 393.7 439 51.3
TPR.G34497 Trifolium pratense HOM05D007498 ORTHO05D009384 8.6e-107 391.3 392 52.8
Peaxi162Scf00100g01524 Petunia axillaris HOM05D007498 ORTHO05D009384 5.5e-106 388.7 356 59.6
FAN05G5059 Fragaria x ananassa HOM05D007498 ORTHO05D009384 7.2e-106 388.3 394 55.6
Lj1A780G53 Lonicera japonica HOM05D007498 ORTHO05D009384 1.2e-105 387.5 360 56.7
Aqoxy1G04193 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 3.6e-105 386.0 363 56.7
FvH4_6g42420 Fragaria vesca HOM05D007498 ORTHO05D009384 4.7e-105 385.6 394 54.6
MBI19_g41387_MAGBIO Magnolia biondii HOM05D007498 ORTHO05D009384 5.2e-104 382.1 361 56.2
Aa31LG8G11370 Aethionema arabicum HOM05D007498 ORTHO05D009384 8.9e-104 381.3 401 53.9
Phvul.006G012811 Phaseolus vulgaris HOM05D007498 ORTHO05D009384 2.0e-103 380.2 385 53.8
Gorai.001G095600 Gossypium raimondii HOM05D007498 ORTHO05D009384 2.6e-103 379.8 386 55.7
Sed0020195 Sechium edule HOM05D007498 ORTHO05D009384 1.1e-101 374.4 387 55.6
HanXRQChr12g0373631 Helianthus annuus HOM05D007498 ORTHO05D009384 1.2e-100 370.9 389 52.4
CsaV3_6G037690 Cucumis sativus L. HOM05D007498 ORTHO05D009384 2.0e-100 370.2 385 55.1
Lsat_1_v5_gn_5_123880 Lactuca sativa HOM05D007498 ORTHO05D009384 2.8e-97 359.8 360 52.2
Gohir.D07G193500 Gossypium hirsutum HOM05D007498 ORTHO05D009384 3.4e-95 352.8 308 60.7
ATR0059G023 Amborella trichopoda HOM05D007498 ORTHO05D009384 2.4e-93 346.7 360 52.2
Lsat_1_v5_gn_7_95281 Lactuca sativa HOM05D007498 ORTHO05D009384 1.2e-92 344.4 377 49.1
MD09G1113300 Malus domestica HOM05D007498 ORTHO05D009384 3.0e-91 339.7 335 54.0
MELO3C014431.2 Cucumis melo HOM05D007498 ORTHO05D009384 6.4e-86 322.0 398 48.2
Duzib138G1101 Durio zibethinus HOM05D007498 ORTHO05D009384 6.6e-83 312.0 396 49.0
Thhalv10002583m.g Eutrema salsugineum HOM05D007498 ORTHO05D009384 6.6e-83 312.0 364 53.3
Gohir.D07G089300 Gossypium hirsutum HOM05D007498 ORTHO05D009384 5.2e-80 302.4 276 59.4
ClCG07G002420 Citrullus lanatus HOM05D007498 ORTHO05D009384 8.9e-80 301.6 391 48.6
Gohir.A07G083200 Gossypium hirsutum HOM05D007498 ORTHO05D009384 1.5e-79 300.8 275 58.9
Psat5g106880 Pisum sativum HOM05D007498 ORTHO05D009384 7.6e-71 271.9 288 52.8
FAN09G2551 Fragaria x ananassa HOM05D007498 ORTHO05D009384 1.3e-70 271.2 318 50.3
ECA234G3795 Erigeron canadensis HOM05D007498 ORTHO05D009384 2.3e-67 260.4 269 53.9
Potri.014G157700 Populus trichocarpa HOM05D007498 ORTHO05D009384 1.6e-65 254.2 236 59.7
SEGI_23048 Sequoiadendron giganteum HOM05D007498 ORTHO05D009384 4.0e-64 249.6 344 40.1
Aqoxy1G02942 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 2.0e-63 247.3 251 51.4
Ca_16281_v3 Cicer arietinum L. HOM05D007498 ORTHO05D009384 1.1e-61 241.5 403 42.9
CDE07G0657 Ceratophyllum demersum HOM05D000323 ORTHO05D009384 2.7e-60 236.9 320 44.7
FAN14G0249 Fragaria x ananassa HOM05D007498 ORTHO05D001133 2.4e-53 213.8 399 39.6
AagrBONN_evm.TU.Sc2ySwM_344.4295 Anthoceros agrestis HOM05D007498 ORTHO05D009384 3.0e-51 206.8 320 36.2
DCAR_019260 Daucus carota HOM05D007498 ORTHO05D001133 4.3e-50 203.0 168 56.5
MD09G1113200 Malus domestica HOM05D007498 ORTHO05D009384 1.0e-46 191.8 235 46.4
Mapoly0005s0243 Marchantia polymorpha HOM05D007498 ORTHO05D009384 4.1e-40 169.9 353 30.9
Cpa.g.sc132.15 Carica papaya HOM05D007498 ORTHO05D009384 3.4e-39 166.8 162 56.2
Pp3c17_21590 Physcomitrium patens HOM05D007498 ORTHO05D009384 4.6e-36 156.4 301 34.6
Haze_12773 Corylus avellana HOM05D007498 ORTHO05D009384 2.0e-31 141.0 335 36.4
SMO146G0054 Selaginella moellendorffii HOM05D007498 ORTHO05D009384 1.6e-28 131.3 297 31.3
VMungo0540G0169 Vigna mungo HOM05D007498 ORTHO05D009384 2.4e-24 117.5 108 52.8
Atru.chr6.3249 Acer truncatum HOM05D007498 ORTHO05D009384 2.5e-21 107.5 91 57.1
Atru.chr6.3248 Acer truncatum HOM05D007498 ORTHO05D009384 8.8e-19 99.0 71 69.0
Aqoxy1G02941 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.1e-13 82.0 92 52.2
VMungo0540G1885 Vigna mungo HOM05D007498 ORTHO05D009384 2.3e-11 74.3 65 58.5
Cfa025227 Carpinus fangiana HOM05D007498 ORTHO05D009384 9.1e-08 62.4 345 24.9
BcaB06g26853 Brassica carinata HOM05D007498 ORTHO05D009384 2.9e-06 57.4 132 34.8
Cre07.g355550 Chlamydomonas reinhardtii HOM05D024201 ORTHO05D009384 6.5e-06 56.2 315 21.6


User provided reference genes

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