Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 2.3e-191 672.2 366 100.0
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 1.9e-76 290.4 482 41.7
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 8.0e-75 285.0 485 41.9
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 5.2e-74 282.3 478 41.6
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 1.7e-72 277.3 465 41.7
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 4.8e-72 275.8 478 42.7
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 4.1e-71 272.7 484 39.3
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 1.6e-70 270.8 497 37.8
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 5.9e-70 268.9 473 41.2
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 1.9e-68 263.8 470 40.6
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 4.2e-68 262.7 472 38.8
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 4.2e-68 262.7 470 38.9
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 1.2e-67 261.2 462 39.6
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 4.7e-67 259.2 464 40.3
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 1.7e-64 250.8 470 40.9
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 2.2e-64 250.4 493 36.9
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 1.1e-63 248.1 317 50.5
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 3.1e-63 246.5 473 38.3
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 7.0e-63 245.4 420 40.2
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 1.6e-62 244.2 481 37.0
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 2.9e-61 240.0 488 36.5
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 1.1e-60 238.0 469 39.4
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 1.5e-60 237.7 476 36.6
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 7.2e-60 235.3 400 40.2
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 1.6e-59 234.2 289 51.2
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 8.0e-59 231.9 478 35.4
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 2.3e-58 230.3 477 36.7
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 3.0e-58 229.9 466 36.5
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 4.0e-58 229.6 469 36.9
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 2.0e-57 227.3 472 37.9
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 5.7e-57 225.7 478 35.6
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 9.8e-57 224.9 468 37.6
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 2.4e-55 220.3 472 35.6
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 4.1e-55 219.5 463 40.8
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 4.1e-55 219.5 463 38.4
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 1.6e-54 217.6 472 36.4
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 2.7e-54 216.9 433 37.2
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 3.5e-54 216.5 467 35.8
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 5.9e-54 215.7 451 36.6
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 1.3e-53 214.5 305 46.6
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 3.8e-53 213.0 467 35.5
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 6.6e-53 212.2 473 35.7
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 7.3e-52 208.8 300 44.7
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 1.4e-50 204.5 485 33.6
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 2.3e-50 203.8 381 35.7
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 5.2e-50 202.6 504 32.5
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 4.4e-49 199.5 496 32.7
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 4.9e-48 196.1 277 46.6
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 4.9e-48 196.1 288 43.1
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 3.2e-47 193.4 423 36.2
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 4.1e-47 193.0 271 49.4
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 7.0e-47 192.2 504 31.2
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 2.0e-46 190.7 468 34.6
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 3.0e-45 186.8 438 35.2
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 8.6e-45 185.3 481 33.5
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 1.0e-42 178.3 333 39.6
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 1.4e-42 177.9 343 38.2
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 5.2e-42 176.0 470 35.5
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 5.2e-42 176.0 439 33.3
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 6.8e-42 175.6 404 34.2
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 8.9e-42 175.3 435 33.6
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 4.4e-41 172.9 443 33.6
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 7.5e-41 172.2 256 41.4
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 4.9e-40 169.5 294 39.5
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 8.3e-40 168.7 344 35.2
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 3.2e-39 166.8 443 33.9
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 7.8e-38 162.2 440 33.9
AL3G11840 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 1.5e-36 157.9 235 44.7
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 9.5e-36 155.2 239 46.9
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 1.2e-35 154.8 277 41.9
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 2.1e-35 154.1 247 43.7
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 5.2e-34 149.4 484 31.2
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 2.6e-33 147.1 395 30.1
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 9.2e-31 138.7 497 28.6
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 1.7e-29 134.4 261 40.2
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 2.3e-29 134.0 235 38.3
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 6.6e-29 132.5 335 32.2
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 7.3e-28 129.0 470 27.4
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 2.1e-27 127.5 312 30.4
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 3.6e-27 126.7 327 32.7
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 7.6e-25 119.0 265 37.4
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 1.0e-21 108.6 307 28.3
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 1.3e-21 108.2 361 28.5
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 3.3e-20 103.6 372 30.4
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 4.7e-19 99.8 453 25.8
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 5.2e-18 96.3 80 57.5
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 9.9e-17 92.0 446 26.0
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 3.2e-15 87.0 277 27.4
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 1.7e-13 81.3 80 48.8
AUR62035477 Chenopodium quinoa HOM05D000128 ORTHO05D000059 8.7e-13 79.0 90 43.3
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 7.3e-12 75.9 209 28.7
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 2.8e-11 73.9 181 33.1
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 1.1e-10 72.0 70 52.9
Lsat_1_v5_gn_3_87441 Lactuca sativa HOM05D007356 ORTHO05D009247 1.4e-10 71.6 72 48.6
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 2.4e-10 70.9 97 44.3
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 9.0e-10 68.9 78 46.2
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 3.4e-09 67.0 92 45.7
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 3.4e-09 67.0 77 44.2


User provided reference genes

Program Settings