Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1634 Punica granatum HOM05D004703 ORTHO05D005801 2.1e-169 599.0 307 100.0
Eucgr.E00504 Eucalyptus grandis HOM05D004703 ORTHO05D005801 1.5e-122 443.4 305 74.1
TAR629G2760 Trochodendron aralioides HOM05D004703 ORTHO05D005801 2.1e-121 439.5 277 79.1
Manes.01G070700 Manihot esculenta HOM05D004703 ORTHO05D005801 1.2e-119 433.7 305 74.1
COL.COLO4_23815 Corchorus olitorius HOM05D004703 ORTHO05D005801 4.4e-119 431.8 301 73.8
DCAR_006785 Daucus carota HOM05D004703 ORTHO05D005801 1.3e-118 430.3 267 78.7
PGSC0003DMG400003941 Solanum tuberosum HOM05D004703 ORTHO05D005801 2.2e-118 429.5 257 81.7
Sopen08g028180 Solanum pennellii HOM05D004703 ORTHO05D005801 6.4e-118 427.9 298 74.5
QL12p016126 Quercus lobata HOM05D004703 ORTHO05D005801 1.4e-117 426.8 289 75.8
QL12p016291 Quercus lobata HOM05D004703 ORTHO05D005801 1.4e-117 426.8 289 75.8
CiPaw.11G143800 Carya illinoinensis HOM05D004703 ORTHO05D005801 9.2e-117 424.1 265 77.7
Dinv37721 Davidia involucrata HOM05D004703 ORTHO05D005801 9.2e-117 424.1 267 78.3
Solyc08g079820.3 Solanum lycopersicum HOM05D004703 ORTHO05D005801 1.2e-116 423.7 298 73.8
Duzib084G1157 Durio zibethinus HOM05D004703 ORTHO05D005801 2.1e-116 422.9 308 71.1
FvH4_5g01080 Fragaria vesca HOM05D004703 ORTHO05D005801 2.1e-116 422.9 304 72.4
Nitab4.5_0005167g0040 Nicotiana tabacum HOM05D004703 ORTHO05D005801 2.7e-116 422.5 282 76.2
Cc08_g13610 Coffea canephora HOM05D004703 ORTHO05D005801 3.5e-116 422.2 279 76.3
Atru.chr9.1491 Acer truncatum HOM05D004703 ORTHO05D005801 7.8e-116 421.0 274 75.9
Potri.003G118300 Populus trichocarpa HOM05D004703 ORTHO05D005801 7.8e-116 421.0 275 76.4
Gorai.006G210900 Gossypium raimondii HOM05D004703 ORTHO05D005801 1.3e-115 420.2 300 71.3
Actinidia14493 Actinidia chinensis HOM05D004703 ORTHO05D005801 1.7e-115 419.9 317 68.8
Prupe.5G084800 Prunus persica HOM05D004703 ORTHO05D005801 1.7e-115 419.9 301 72.8
Ciclev10021310m.g Citrus clementina HOM05D004703 ORTHO05D005801 2.3e-115 419.5 276 75.7
Gohir.D09G188100 Gossypium hirsutum HOM05D004703 ORTHO05D005801 2.3e-115 419.5 308 70.5
Nitab4.5_0012494g0020 Nicotiana tabacum HOM05D004703 ORTHO05D005801 2.3e-115 419.5 309 71.2
Thecc.03G266100 Theobroma cacao HOM05D004703 ORTHO05D005801 2.3e-115 419.5 304 71.4
VMungo0251G1252 Vigna mungo HOM05D004703 ORTHO05D005801 3.0e-115 419.1 278 75.2
Gohir.A09G193900 Gossypium hirsutum HOM05D004703 ORTHO05D005801 3.9e-115 418.7 308 70.1
Migut.A00879 Erythranthe guttata HOM05D004703 ORTHO05D005801 5.1e-115 418.3 268 75.4
Lj4g0003091 Lotus japonicus HOM05D004703 ORTHO05D005801 1.5e-114 416.8 277 75.8
Peaxi162Scf00620g00231 Petunia axillaris HOM05D004703 ORTHO05D005801 2.5e-114 416.0 328 67.4
CANSAT21G0478 Cannabis sativa HOM05D004703 ORTHO05D005801 4.3e-114 415.2 266 77.1
Haze_09002 Corylus avellana HOM05D004703 ORTHO05D005801 5.6e-114 414.8 305 70.8
CsaV3_5G003450 Cucumis sativus L. HOM05D004703 ORTHO05D005801 7.3e-114 414.5 308 69.5
Oeu001909.1 Olea europaea HOM05D004703 ORTHO05D005801 7.3e-114 414.5 265 77.0
Hma1.2p1_0138F.1_g062820 Hydrangea macrophylla HOM05D004703 ORTHO05D005801 3.6e-113 412.1 257 79.8
CSS0042147 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 6.2e-113 411.4 276 74.3
Lalb_Chr05g0225211 Lupinus albus HOM05D004703 ORTHO05D005801 6.2e-113 411.4 283 73.9
TWI15G0205 Tripterygium wilfordii HOM05D004703 ORTHO05D005801 8.1e-113 411.0 316 69.0
Glyma.05G054900 Glycine max HOM05D004703 ORTHO05D005801 1.1e-112 410.6 278 75.2
GSVIVG01019903001 Vitis vinifera HOM05D004703 ORTHO05D005801 1.1e-112 410.6 266 75.9
AL6G46750 Arabidopsis lyrata HOM05D004703 ORTHO05D005801 1.4e-112 410.2 279 71.3
FAN18G3460 Fragaria x ananassa HOM05D004703 ORTHO05D005801 1.4e-112 410.2 327 67.3
Thhalv10028825m.g Eutrema salsugineum HOM05D004703 ORTHO05D005801 1.8e-112 409.8 280 71.1
MD04G1073000 Malus domestica HOM05D004703 ORTHO05D005801 1.8e-112 409.8 281 73.3
FAN13G0401 Fragaria x ananassa HOM05D004703 ORTHO05D005801 2.3e-112 409.5 327 67.6
Sed0028019 Sechium edule HOM05D004703 ORTHO05D005801 2.3e-112 409.5 306 70.3
Phvul.003G216900 Phaseolus vulgaris HOM05D004703 ORTHO05D005801 3.1e-112 409.1 278 75.2
RcHm_v2.0_Chr7g0200241 Rosa chinensis HOM05D004703 ORTHO05D005801 5.2e-112 408.3 286 72.7
Ca_12294_v3 Cicer arietinum L. HOM05D004703 ORTHO05D005801 1.2e-111 407.1 286 71.7
Aqoxy7G00537 Aquilegia oxysepala HOM05D004703 ORTHO05D005801 2.6e-111 406.0 304 67.8
Glyma.05G054800 Glycine max HOM05D004703 ORTHO05D005801 3.4e-111 405.6 278 74.1
Sabra03G0082300 Salix brachista HOM05D004703 ORTHO05D005801 4.4e-111 405.2 292 71.2
TPR.G37619 Trifolium pratense HOM05D004703 ORTHO05D005801 4.4e-111 405.2 300 69.0
SGA_v2.0_scaffold37G14871 Striga asiatica HOM05D004703 ORTHO05D005801 9.9e-111 404.1 273 72.5
CARHR254310 Cardamine hirsuta HOM05D004703 ORTHO05D005801 1.3e-110 403.7 284 70.1
Lsat_1_v5_gn_6_10661 Lactuca sativa HOM05D004703 ORTHO05D005801 1.3e-110 403.7 301 67.1
AT4G11980 Arabidopsis thaliana HOM05D004703 ORTHO05D005801 1.7e-110 403.3 283 70.7
Medtr4g101830 Medicago truncatula HOM05D004703 ORTHO05D005801 1.7e-110 403.3 293 71.0
Carub.0006s3108 Capsella rubella HOM05D004703 ORTHO05D005801 2.2e-110 402.9 282 69.5
THA.LOC104806355 Tarenaya hassleriana HOM05D004703 ORTHO05D005801 2.9e-110 402.5 297 69.0
Hund14696 Selenicereus undatus HOM05D004703 ORTHO05D005801 1.4e-109 400.2 264 74.2
ECA233G5834 Erigeron canadensis HOM05D004703 ORTHO05D005801 7.1e-109 397.9 267 72.3
BcaC04g21182 Brassica carinata HOM05D004703 ORTHO05D005801 6.0e-108 394.8 304 67.1
C09p34490 Brassica napus HOM05D004703 ORTHO05D005801 6.0e-108 394.8 304 67.1
AUR62017343 Chenopodium quinoa HOM05D004703 ORTHO05D005801 6.0e-108 394.8 277 71.5
BcaB01g01695 Brassica carinata HOM05D004703 ORTHO05D005801 7.8e-108 394.4 301 68.1
BolC9t56293H Brassica oleracea HOM05D004703 ORTHO05D005801 7.8e-108 394.4 305 66.9
CAN.G630.24 Capsicum annuum HOM05D004703 ORTHO05D005801 1.7e-107 393.3 231 84.0
EL10Ac5g12672 Beta vulgaris HOM05D004703 ORTHO05D005801 3.0e-107 392.5 259 73.4
Rhsim08G0184400 Rhododendron simsii HOM05D004703 ORTHO05D005801 3.9e-107 392.1 352 61.4
AUR62010550 Chenopodium quinoa HOM05D004703 ORTHO05D005801 8.6e-107 391.0 267 73.0
CDE04G3458 Ceratophyllum demersum HOM05D004703 ORTHO05D005801 1.1e-106 390.6 263 73.0
Ah.12g053460 Amaranthus hybridus HOM05D004703 ORTHO05D005801 2.5e-106 389.4 304 66.8
Ah.12g057950 Amaranthus hybridus HOM05D004703 ORTHO05D005801 2.5e-106 389.4 304 66.8
VMungo0251G1928 Vigna mungo HOM05D004703 ORTHO05D005801 3.3e-106 389.0 317 63.7
arahy.Tifrunner.gnm1.ann1.RRY62Q Arachis hypogaea HOM05D004703 ORTHO05D005801 9.6e-106 387.5 239 81.6
Os06g0129700 Oryza sativa ssp. japonica HOM05D004703 ORTHO05D005801 9.6e-106 387.5 268 70.1
PSO782G3959 Papaver somniferum HOM05D004703 ORTHO05D005801 1.6e-105 386.7 304 63.8
HanXRQChr07g0186971 Helianthus annuus HOM05D004703 ORTHO05D005801 4.7e-105 385.2 346 59.8
RcHm_v2.0_Chr6g0265181 Rosa chinensis HOM05D004703 ORTHO05D005801 1.1e-104 384.0 268 71.3
RcHm_v2.0_Chr6g0265101 Rosa chinensis HOM05D004703 ORTHO05D005801 1.4e-104 383.6 268 70.9
PSO478G3008 Papaver somniferum HOM05D004703 ORTHO05D005801 1.8e-104 383.3 300 64.7
unitig_22.g5479 Utricularia gibba HOM05D004703 ORTHO05D005801 3.1e-104 382.5 289 66.8
PSO478G3534 Papaver somniferum HOM05D004703 ORTHO05D005801 2.0e-103 379.8 250 72.0
MBI04_g28556_MAGBIO Magnolia biondii HOM05D004703 ORTHO05D005801 5.8e-103 378.3 242 77.7
CSS0006775 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 1.7e-102 376.7 232 80.2
Psat4g069480 Pisum sativum HOM05D004703 ORTHO05D005801 1.7e-102 376.7 233 80.7
Lj2A203G54 Lonicera japonica HOM05D004703 ORTHO05D005801 8.4e-102 374.4 232 79.3
Ah.02g116260 Amaranthus hybridus HOM05D004703 ORTHO05D005801 4.2e-101 372.1 251 71.3
ClCG01G003390 Citrullus lanatus HOM05D004703 ORTHO05D005801 5.4e-101 371.7 285 68.1
MELO3C005608.2 Cucumis melo HOM05D004703 ORTHO05D005801 1.3e-99 367.1 413 52.1
HPP92_020651 Vanilla planifolia HOM05D004703 ORTHO05D005801 1.6e-97 360.1 256 68.4
Cpa.g.sc29.48 Carica papaya HOM05D004703 ORTHO05D005801 2.1e-97 359.8 305 62.6
A09p27170 Brassica napus HOM05D004703 ORTHO05D005801 9.9e-95 350.9 262 68.3
Aa31LG9G10490 Aethionema arabicum HOM05D004703 ORTHO05D005801 1.7e-94 350.1 256 69.5
CBR_g30593 Chara braunii HOM05D004703 ORTHO05D005801 3.9e-91 339.0 255 64.3
arahy.Tifrunner.gnm1.ann1.TVWC12 Arachis hypogaea HOM05D004703 ORTHO05D005801 1.1e-88 330.9 238 72.3
Mapoly0093s0020 Marchantia polymorpha HOM05D004703 ORTHO05D005801 1.5e-87 327.0 301 55.1
SalBow6G2643 Salvia bowleyana HOM05D004703 ORTHO05D005801 3.4e-87 325.9 194 80.4
FAN08G2483 Fragaria x ananassa HOM05D004703 ORTHO05D005801 1.7e-86 323.6 267 65.9
Pp3c15_11750 Physcomitrium patens HOM05D004703 ORTHO05D005801 8.7e-83 311.2 253 60.1
vmacro19246 Vaccinium macrocarpon HOM05D004703 ORTHO05D005801 2.0e-79 300.1 203 74.9
Sc07g0009460 Simmondsia chinensis HOM05D004703 ORTHO05D005801 2.5e-77 293.1 224 68.8
SMO140G0070 Selaginella moellendorffii HOM05D004703 ORTHO05D005801 3.1e-72 276.2 199 65.3
Nn1g00505 Nelumbo nucifera HOM05D004703 ORTHO05D005801 6.9e-72 275.0 223 65.9
Zm00001eb378400 Zea mays HOM05D004703 ORTHO05D005801 5.5e-69 265.4 216 64.4
RcHm_v2.0_Chr0c37g0502981 Rosa chinensis HOM05D004703 ORTHO05D005801 1.2e-63 247.7 196 65.8
Sp6g05530 Schrenkiella parvula HOM05D004703 ORTHO05D005801 3.4e-63 246.1 201 64.2
arahy.Tifrunner.gnm1.ann1.HPWZ3I Arachis hypogaea HOM05D004703 ORTHO05D005801 4.5e-63 245.7 159 77.4
RcHm_v2.0_Chr4g0403961 Rosa chinensis HOM05D004703 ORTHO05D005801 8.5e-62 241.5 199 64.8
Haze_13993 Corylus avellana HOM05D004703 ORTHO05D005801 9.4e-61 238.0 201 64.7
AagrBONN_evm.TU.Sc2ySwM_344.4389 Anthoceros agrestis HOM05D004703 ORTHO05D005801 2.6e-58 229.9 215 55.3
BcaB04g18565 Brassica carinata HOM05D004703 ORTHO05D005801 5.9e-55 218.8 171 67.3
MSTRG.25560 Avicennia marina HOM05D004703 ORTHO05D005801 2.9e-54 216.5 129 82.2
BcaB02g09202 Brassica carinata HOM05D004703 ORTHO05D005801 6.5e-54 215.3 171 66.1
BcaB02g11533 Brassica carinata HOM05D004703 ORTHO05D005801 3.3e-50 203.0 228 51.3
arahy.Tifrunner.gnm1.ann1.R8Q162 Arachis hypogaea HOM05D004703 ORTHO05D005801 1.5e-45 187.6 157 65.6
arahy.Tifrunner.gnm1.ann1.U0A30G Arachis hypogaea HOM05D004703 ORTHO05D005801 4.2e-45 186.0 157 65.6
arahy.Tifrunner.gnm1.ann1.0W2QGA Arachis hypogaea HOM05D004703 ORTHO05D005801 5.5e-45 185.7 156 66.0
arahy.Tifrunner.gnm1.ann1.QD9SPH Arachis hypogaea HOM05D004703 ORTHO05D005801 5.5e-45 185.7 157 66.2
ATR0905G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 7.2e-45 185.3 124 70.2
arahy.Tifrunner.gnm1.ann1.TN8QBF Arachis hypogaea HOM05D004703 ORTHO05D005801 2.1e-44 183.7 163 64.4
arahy.Tifrunner.gnm1.ann1.DGE7ZD Arachis hypogaea HOM05D004703 ORTHO05D005801 2.7e-44 183.3 173 60.7
arahy.Tifrunner.gnm1.ann1.KBZV3C Arachis hypogaea HOM05D004703 ORTHO05D005801 1.4e-43 181.0 157 64.3
arahy.Tifrunner.gnm1.ann1.7IH5G2 Arachis hypogaea HOM05D004703 ORTHO05D005801 8.8e-43 178.3 214 52.3
arahy.Tifrunner.gnm1.ann1.J3Q2MP Arachis hypogaea HOM05D004703 ORTHO05D005801 4.4e-42 176.0 164 60.4
arahy.Tifrunner.gnm1.ann1.QT2LTC Arachis hypogaea HOM05D004703 ORTHO05D005801 1.3e-38 164.5 146 63.0
BcaC01g04204 Brassica carinata HOM05D004703 ORTHO05D005801 1.7e-38 164.1 108 76.9
arahy.Tifrunner.gnm1.ann1.EX0EXI Arachis hypogaea HOM05D004703 ORTHO05D005801 9.4e-37 158.3 163 58.3
Zm00001eb279110 Zea mays HOM05D004703 ORTHO05D005801 2.7e-36 156.8 98 77.6
RcHm_v2.0_Chr4g0425481 Rosa chinensis HOM05D004703 ORTHO05D005801 5.2e-35 152.5 176 53.4
Zm00001eb113910 Zea mays HOM05D004703 ORTHO05D005801 1.5e-34 151.0 99 74.7
arahy.Tifrunner.gnm1.ann1.UX21TB Arachis hypogaea HOM05D004703 ORTHO05D005801 1.3e-33 147.9 162 55.6
arahy.Tifrunner.gnm1.ann1.YD44XK Arachis hypogaea HOM05D004703 ORTHO05D005801 1.3e-33 147.9 162 55.6
arahy.Tifrunner.gnm1.ann1.XKXY1P Arachis hypogaea HOM05D004703 ORTHO05D005801 2.4e-32 143.7 94 79.8
arahy.Tifrunner.gnm1.ann1.WGQ9HG Arachis hypogaea HOM05D004703 ORTHO05D005801 4.1e-32 142.9 123 64.2
arahy.Tifrunner.gnm1.ann1.QV6CQV Arachis hypogaea HOM05D004703 ORTHO05D005801 7.0e-32 142.1 122 63.9
arahy.Tifrunner.gnm1.ann1.L680XF Arachis hypogaea HOM05D004703 ORTHO05D005801 1.2e-31 141.4 97 76.3
Cfa024731 Carpinus fangiana HOM05D004703 ORTHO05D005801 3.5e-31 139.8 227 39.2
ATR0251G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 2.1e-28 130.6 88 69.3
arahy.Tifrunner.gnm1.ann1.DQS0N1 Arachis hypogaea HOM05D004703 ORTHO05D005801 2.6e-26 123.6 159 49.7
vmacro19247 Vaccinium macrocarpon HOM05D004703 ORTHO05D005801 9.8e-26 121.7 75 77.3
arahy.Tifrunner.gnm1.ann1.0PA3BU Arachis hypogaea HOM05D004703 ORTHO05D005801 5.4e-24 115.9 109 59.6
arahy.Tifrunner.gnm1.ann1.IA6KQS Arachis hypogaea HOM05D004703 ORTHO05D005801 1.5e-21 107.8 70 81.4
arahy.Tifrunner.gnm1.ann1.5L4UK7 Arachis hypogaea HOM05D004703 ORTHO05D005801 4.7e-20 102.8 133 46.6
arahy.Tifrunner.gnm1.ann1.N0B60F Arachis hypogaea HOM05D003718 ORTHO05D004402 1.8e-16 90.9 56 76.8
CSS0004055 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 1.6e-15 87.8 57 71.9
arahy.Tifrunner.gnm1.ann1.2KDH9Q Arachis hypogaea HOM05D004703 ORTHO05D005801 2.0e-15 87.4 96 52.1
arahy.Tifrunner.gnm1.ann1.4J0L4L Arachis hypogaea HOM05D004703 ORTHO05D005801 1.7e-14 84.3 89 55.1
arahy.Tifrunner.gnm1.ann1.RAR2PQ Arachis hypogaea HOM05D004703 ORTHO05D030873 1.9e-08 64.3 111 38.7
SalBow6G4210 Salvia bowleyana HOM05D004703 ORTHO05D005801 3.2e-08 63.5 149 32.2
arahy.Tifrunner.gnm1.ann1.54H2MY Arachis hypogaea HOM05D001155 ORTHO05D015979 3.9e-06 56.6 37 73.0
arahy.Tifrunner.gnm1.ann1.5AIV52 Arachis hypogaea HOM05D001155 ORTHO05D001080 3.9e-06 56.6 47 61.7
arahy.Tifrunner.gnm1.ann1.CXRB51 Arachis hypogaea HOM05D004703 ORTHO05D015979 8.6e-06 55.5 35 74.3


User provided reference genes

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