Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1488 Punica granatum HOM05D001401 ORTHO05D006368 3.3e-137 491.9 278 100.0
Eucgr.I01238 Eucalyptus grandis HOM05D001401 ORTHO05D006368 1.4e-60 237.3 296 57.8
CiPaw.05G060100 Carya illinoinensis HOM05D001401 ORTHO05D006368 1.6e-59 233.8 307 53.1
Phvul.011G048500 Phaseolus vulgaris HOM05D001401 ORTHO05D006368 1.1e-57 227.6 297 47.8
RcHm_v2.0_Chr6g0262181 Rosa chinensis HOM05D001401 ORTHO05D006368 1.5e-57 227.3 290 46.6
FAN20G2914 Fragaria x ananassa HOM05D001401 ORTHO05D006368 5.7e-57 225.3 289 45.0
VMungo1127G1180 Vigna mungo HOM05D001401 ORTHO05D006368 1.7e-56 223.8 298 48.3
CANSAT25G1485 Cannabis sativa HOM05D001401 ORTHO05D006368 3.7e-56 222.6 299 49.2
Haze_02430 Corylus avellana HOM05D001401 ORTHO05D006368 1.8e-55 220.3 295 51.9
Glyma.11G121600 Glycine max HOM05D001401 ORTHO05D006368 4.1e-55 219.2 297 48.1
Glyma.12G046700 Glycine max HOM05D001401 ORTHO05D006368 2.6e-54 216.5 296 46.3
FAN24G0528 Fragaria x ananassa HOM05D001401 ORTHO05D006368 4.5e-54 215.7 284 50.4
Hma1.2p1_0584F.1_g183440 Hydrangea macrophylla HOM05D001401 ORTHO05D006368 1.0e-53 214.5 302 45.0
Psat7g205720 Pisum sativum HOM05D001401 ORTHO05D006368 1.7e-53 213.8 302 47.0
PSO170G2675 Papaver somniferum HOM05D001401 ORTHO05D006368 3.8e-53 212.6 290 43.8
Prupe.8G107000 Prunus persica HOM05D001401 ORTHO05D006368 3.8e-53 212.6 306 49.3
Medtr4g068880 Medicago truncatula HOM05D001401 ORTHO05D006368 2.5e-52 209.9 293 48.8
FvH4_2g07780 Fragaria vesca HOM05D001401 ORTHO05D006368 7.2e-52 208.4 284 49.3
PSO700G0268 Papaver somniferum HOM05D001401 ORTHO05D006368 7.2e-52 208.4 290 43.4
MD05G1071000 Malus domestica HOM05D001401 ORTHO05D006368 2.1e-51 206.8 297 45.8
Ca_20836_v3 Cicer arietinum L. HOM05D001401 ORTHO05D006368 4.7e-51 205.7 294 43.5
Sed0001686 Sechium edule HOM05D001401 ORTHO05D006368 8.0e-51 204.9 299 43.1
Manes.15G147100 Manihot esculenta HOM05D001401 ORTHO05D006368 1.4e-50 204.1 322 40.7
CSS0017552 Camellia sinensis var. sinensis HOM05D001401 ORTHO05D006368 2.3e-50 203.4 310 52.3
Lj3g0025450 Lotus japonicus HOM05D001401 ORTHO05D006368 3.0e-50 203.0 311 43.4
TWI31G0569 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 3.0e-50 203.0 309 46.0
vmacro02151 Vaccinium macrocarpon HOM05D001401 ORTHO05D006368 3.9e-50 202.6 309 46.9
arahy.Tifrunner.gnm1.ann1.U2ETAV Arachis hypogaea HOM05D001401 ORTHO05D006368 5.2e-50 202.2 306 41.2
Dinv42099 Davidia involucrata HOM05D001401 ORTHO05D006368 6.7e-50 201.8 309 51.1
QL11p037824 Quercus lobata HOM05D001401 ORTHO05D006368 6.7e-50 201.8 337 42.4
Ciclev10028944m.g Citrus clementina HOM05D001401 ORTHO05D006368 8.8e-50 201.4 299 44.8
Aqoxy6G00969 Aquilegia oxysepala HOM05D001401 ORTHO05D006368 9.7e-49 198.0 299 42.5
Thecc.02G031200 Theobroma cacao HOM05D001401 ORTHO05D006368 1.7e-48 197.2 332 45.8
TPR.G28096 Trifolium pratense HOM05D001401 ORTHO05D006368 1.7e-48 197.2 294 51.7
Lsat_1_v5_gn_5_118161 Lactuca sativa HOM05D001401 ORTHO05D006368 2.2e-48 196.8 284 45.4
Gohir.A01G181100 Gossypium hirsutum HOM05D001401 ORTHO05D006368 2.8e-48 196.4 310 43.5
TAR628G1386 Trochodendron aralioides HOM05D001401 ORTHO05D006368 2.8e-48 196.4 297 40.4
Dinv23564 Davidia involucrata HOM05D001401 ORTHO05D006368 3.7e-48 196.1 299 49.8
Manes.17G098401 Manihot esculenta HOM05D001401 ORTHO05D006368 3.7e-48 196.1 321 40.5
Sed0023769 Sechium edule HOM05D001401 ORTHO05D006368 3.7e-48 196.1 300 41.7
Lalb_Chr03g0025871 Lupinus albus HOM05D001401 ORTHO05D006368 4.8e-48 195.7 288 45.5
ClCG09G017860 Citrullus lanatus HOM05D001401 ORTHO05D006368 8.2e-48 194.9 308 46.8
Gorai.002G213800 Gossypium raimondii HOM05D001401 ORTHO05D006368 8.2e-48 194.9 309 42.1
Potri.004G149900 Populus trichocarpa HOM05D001401 ORTHO05D006368 8.2e-48 194.9 319 40.8
Cfa021516 Carpinus fangiana HOM05D001401 ORTHO05D006368 1.4e-47 194.1 220 53.2
Actinidia27915 Actinidia chinensis HOM05D001401 ORTHO05D006368 1.8e-47 193.7 315 43.5
FAN15G1840 Fragaria x ananassa HOM05D001401 ORTHO05D006368 2.4e-47 193.4 206 50.0
Gohir.D01G172200 Gossypium hirsutum HOM05D001401 ORTHO05D006368 5.3e-47 192.2 309 41.4
Potri.009G111000 Populus trichocarpa HOM05D001401 ORTHO05D006368 1.2e-46 191.0 320 40.6
Lalb_Chr01g0002831 Lupinus albus HOM05D001401 ORTHO05D006368 2.6e-46 189.9 302 44.4
Sabra09G0084600 Salix brachista HOM05D001401 ORTHO05D006368 2.6e-46 189.9 318 41.5
Oeu034083.1 Olea europaea HOM05D001401 ORTHO05D006368 3.5e-46 189.5 306 42.5
TAR381G0019 Trochodendron aralioides HOM05D001401 ORTHO05D006368 3.5e-46 189.5 309 40.1
MELO3C021952.2 Cucumis melo HOM05D001401 ORTHO05D002222 1.0e-45 188.0 307 41.0
CsaV3_2G014470 Cucumis sativus L. HOM05D001401 ORTHO05D006368 1.3e-45 187.6 308 39.9
TWI75G1696 Tripterygium wilfordii HOM05D001401 ORTHO05D006368 1.7e-45 187.2 309 45.0
AT2G16070 Arabidopsis thaliana HOM05D001401 ORTHO05D006368 6.5e-45 185.3 316 40.5
Aa31LG8G13520 Aethionema arabicum HOM05D001401 ORTHO05D006368 8.5e-45 184.9 299 38.5
CARHR106370 Cardamine hirsuta HOM05D001401 ORTHO05D006368 8.5e-45 184.9 309 38.8
AUR62016681 Chenopodium quinoa HOM05D001401 ORTHO05D006368 8.5e-45 184.9 293 39.9
QL11p040047 Quercus lobata HOM05D001401 ORTHO05D006368 1.9e-44 183.7 219 51.6
Actinidia00491 Actinidia chinensis HOM05D001401 ORTHO05D006368 4.2e-44 182.6 306 44.1
Hund06213 Selenicereus undatus HOM05D001401 ORTHO05D006368 5.5e-44 182.2 299 38.5
DCAR_029001 Daucus carota HOM05D001401 ORTHO05D006368 9.4e-44 181.4 296 42.9
Rhsim11G0172600 Rhododendron simsii HOM05D000554 ORTHO05D002829 1.2e-43 181.0 349 38.4
Duzib248G1632 Durio zibethinus HOM05D001401 ORTHO05D006368 1.6e-43 180.6 343 38.5
Cpa.g.sc62.97 Carica papaya HOM05D001401 ORTHO05D006368 2.1e-43 180.3 328 42.7
Duzib132G0928 Durio zibethinus HOM05D001401 ORTHO05D006368 2.1e-43 180.3 330 43.9
Thhalv10022794m.g Eutrema salsugineum HOM05D001401 ORTHO05D006368 2.1e-43 180.3 305 41.3
Cfa021524 Carpinus fangiana HOM05D001401 ORTHO05D002222 3.6e-43 179.5 212 51.9
Nitab4.5_0003816g0020 Nicotiana tabacum HOM05D001401 ORTHO05D006368 4.7e-43 179.1 292 40.1
AUR62011378 Chenopodium quinoa HOM05D001401 ORTHO05D006368 6.1e-43 178.7 292 38.7
HanXRQChr10g0307141 Helianthus annuus HOM05D001401 ORTHO05D006368 8.0e-43 178.3 287 41.8
TWI79G1069 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 1.0e-42 177.9 307 48.2
Carub.0003s2988 Capsella rubella HOM05D001401 ORTHO05D006368 2.3e-42 176.8 316 38.3
Medtr0026s0200 Medicago truncatula HOM05D001401 ORTHO05D006368 2.3e-42 176.8 223 47.5
Nn5g29458 Nelumbo nucifera HOM05D001401 ORTHO05D006368 2.3e-42 176.8 291 40.2
SalBow6G2648 Salvia bowleyana HOM05D001401 ORTHO05D006368 5.2e-42 175.6 297 42.4
Atru.chr5.2919 Acer truncatum HOM05D001401 ORTHO05D006368 8.8e-42 174.9 312 40.7
THA.LOC104807334 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 8.8e-42 174.9 317 39.1
PSO675G0936 Papaver somniferum HOM05D001401 ORTHO05D006368 1.5e-41 174.1 294 39.8
Peaxi162Scf00016g01140 Petunia axillaris HOM05D001401 ORTHO05D006368 2.0e-41 173.7 289 39.1
Sp3g29340 Schrenkiella parvula HOM05D001401 ORTHO05D006368 3.4e-41 172.9 313 36.4
PSO541G5534 Papaver somniferum HOM05D001401 ORTHO05D006368 4.4e-41 172.6 297 40.1
MSTRG.20113 Avicennia marina HOM05D001401 ORTHO05D006368 1.7e-40 170.6 303 40.6
COL.COLO4_17797 Corchorus olitorius HOM05D000370 ORTHO05D001335 2.8e-40 169.9 217 48.8
A07p04770 Brassica napus HOM05D001401 ORTHO05D006368 4.8e-40 169.1 297 39.1
BraA07t28264Z Brassica rapa HOM05D001401 ORTHO05D006368 4.8e-40 169.1 297 39.1
Migut.N01216 Erythranthe guttata HOM05D001401 ORTHO05D006368 6.3e-40 168.7 292 40.4
Lj9P365T45 Lonicera japonica HOM05D001401 ORTHO05D006368 1.4e-39 167.5 216 49.1
PGSC0003DMG400025176 Solanum tuberosum HOM05D001401 ORTHO05D006368 1.4e-39 167.5 292 38.0
Sed0001319 Sechium edule HOM05D001401 ORTHO05D006368 1.8e-39 167.2 295 37.3
A03p45690 Brassica napus HOM05D001401 ORTHO05D006368 2.4e-39 166.8 293 40.6
Nitab4.5_0004280g0010 Nicotiana tabacum HOM05D001401 ORTHO05D006368 2.4e-39 166.8 302 37.4
MSTRG.5386 Avicennia marina HOM05D001401 ORTHO05D006368 3.1e-39 166.4 302 39.7
BcaC01g03041 Brassica carinata HOM05D001401 ORTHO05D006368 3.1e-39 166.4 311 37.9
C03p56790 Brassica napus HOM05D001401 ORTHO05D006368 3.1e-39 166.4 311 37.9
BolC3t17961H Brassica oleracea HOM05D001401 ORTHO05D006368 3.1e-39 166.4 311 37.9
BraA03t13701Z Brassica rapa HOM05D001401 ORTHO05D006368 3.1e-39 166.4 294 40.5
Cc02_g18020 Coffea canephora HOM05D001401 ORTHO05D006368 3.1e-39 166.4 305 38.0
ATR0733G254 Amborella trichopoda HOM05D001401 ORTHO05D006368 4.1e-39 166.0 325 38.2
BcaB08g34633 Brassica carinata HOM05D001401 ORTHO05D006368 9.1e-39 164.9 305 39.7
Sopen01g051420 Solanum pennellii HOM05D001401 ORTHO05D006368 9.1e-39 164.9 292 37.3
Solyc01g109260.3 Solanum lycopersicum HOM05D001401 ORTHO05D006368 1.2e-38 164.5 292 37.7
ECA234G2696 Erigeron canadensis HOM05D000324 ORTHO05D001014 1.6e-38 164.1 281 41.3
C07p07640 Brassica napus HOM05D001401 ORTHO05D006368 2.0e-38 163.7 301 41.5
BolC7t41185H Brassica oleracea HOM05D001401 ORTHO05D006368 2.0e-38 163.7 301 41.5
Sabra04G0099700 Salix brachista HOM05D001401 ORTHO05D006368 3.5e-38 162.9 219 46.1
Hund00301 Selenicereus undatus HOM05D001401 ORTHO05D006368 4.5e-38 162.5 308 37.3
CAN.G322.101 Capsicum annuum HOM05D001401 ORTHO05D006368 5.9e-38 162.2 296 39.9
CsaV3_7G010190 Cucumis sativus L. HOM05D001401 ORTHO05D006368 7.7e-38 161.8 303 39.9
SGA_v2.0_scaffold58G20583 Striga asiatica HOM05D001401 ORTHO05D006368 1.3e-37 161.0 293 39.6
ClCG02G005370 Citrullus lanatus HOM05D001401 ORTHO05D006368 1.7e-37 160.6 308 41.6
MELO3C018410.2 Cucumis melo HOM05D001401 ORTHO05D006368 2.2e-37 160.2 308 40.6
Ah.01g006390 Amaranthus hybridus HOM05D001401 ORTHO05D006368 2.9e-37 159.8 283 37.5
BcaC06g36113 Brassica carinata HOM05D001401 ORTHO05D006368 1.1e-36 157.9 296 40.5
CDE01G0160 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 4.2e-36 156.0 294 37.4
Migut.B00279 Erythranthe guttata HOM05D001401 ORTHO05D006368 4.2e-36 156.0 300 39.3
MBI16_g36202_MAGBIO Magnolia biondii HOM05D001401 ORTHO05D002222 4.2e-36 156.0 218 45.0
Hund00294 Selenicereus undatus HOM05D001401 ORTHO05D006368 5.2e-34 149.1 300 36.3
Sc08g0000270 Simmondsia chinensis HOM05D001401 ORTHO05D006368 1.5e-33 147.5 289 37.7
A09p10890 Brassica napus HOM05D001401 ORTHO05D006368 7.5e-33 145.2 306 35.9
Ah.01g019700 Amaranthus hybridus HOM05D001401 ORTHO05D002222 2.2e-32 143.7 202 41.1
Oeu027593.1 Olea europaea HOM05D001574 ORTHO05D006368 3.5e-30 136.3 265 37.4
Os07g0123300 Oryza sativa ssp. japonica HOM05D001401 ORTHO05D006368 6.6e-29 132.1 219 37.9
THA.LOC104820173 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 1.9e-28 130.6 317 33.8
CDE04G2456 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 4.2e-28 129.4 290 35.5
GSVIVG01031902001 Vitis vinifera HOM05D001401 ORTHO05D006368 6.8e-26 122.1 149 51.7
EL10Ac9g21774 Beta vulgaris HOM05D001401 ORTHO05D002222 1.5e-25 120.9 266 42.5
Nn1g05138 Nelumbo nucifera HOM05D001401 ORTHO05D006368 9.8e-25 118.2 155 46.5
SEGI_00142 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 8.3e-24 115.2 301 32.6
Zm00001eb299190 Zea mays HOM05D001401 ORTHO05D006368 3.9e-21 106.3 237 34.6
Pp3c1_32220 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.5e-20 104.4 351 28.8
Pp3c2_5300 Physcomitrium patens HOM05D001401 ORTHO05D006368 4.7e-19 99.4 255 30.6
BcaNung01772 Brassica carinata HOM05D001401 ORTHO05D006368 8.0e-19 98.6 172 44.2
C09p12860 Brassica napus HOM05D001401 ORTHO05D006368 6.8e-18 95.5 292 30.8
BolC9t54175H Brassica oleracea HOM05D001401 ORTHO05D006368 6.8e-18 95.5 292 30.8
TAR623G1717 Trochodendron aralioides HOM05D001401 ORTHO05D006368 4.4e-17 92.8 90 57.8
BraA09t36729Z Brassica rapa HOM05D001401 ORTHO05D006368 4.9e-16 89.4 156 36.5
Mapoly0001s0328 Marchantia polymorpha HOM05D001401 ORTHO05D006368 1.4e-15 87.8 249 29.7
Pp3c17_18860 Physcomitrium patens HOM05D001401 ORTHO05D006368 2.0e-14 84.0 254 29.1
Pp3c22_17090 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.7e-13 80.9 375 24.5
CDE02G3784 Ceratophyllum demersum HOM05D001401 ORTHO05D002222 2.3e-13 80.5 125 40.0
BcaB07g31630 Brassica carinata HOM05D006912 ORTHO05D008686 5.0e-13 79.3 137 38.0
SEGI_14403 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 1.1e-12 78.2 333 25.8
Lj1C312T0 Lonicera japonica HOM05D001401 ORTHO05D006368 4.0e-10 69.7 108 45.4
Pp3c19_14090 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.5e-09 67.8 370 21.4
SalBow1G1061 Salvia bowleyana HOM05D001999 ORTHO05D001994 1.5e-09 67.8 58 65.5
AagrBONN_evm.TU.Sc2ySwM_228.2503 Anthoceros agrestis HOM05D001401 ORTHO05D006368 3.4e-09 66.6 230 25.2
BcaC04g23035 Brassica carinata HOM05D001401 ORTHO05D006368 2.1e-06 57.4 41 63.4
FAN15G1877 Fragaria x ananassa HOM05D001401 ORTHO05D006368 3.5e-06 56.6 42 66.7
Pp3c18_7150 Physcomitrium patens HOM05D001401 ORTHO05D006368 6.0e-06 55.8 321 23.7


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