Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1442 Punica granatum HOM05D000120 ORTHO05D009410 4.3e-133 478.0 246 100.0
Dinv23458 Davidia involucrata HOM05D000120 ORTHO05D009410 2.1e-34 150.2 252 40.5
Thecc.02G075700 Theobroma cacao HOM05D000120 ORTHO05D009410 4.6e-34 149.1 258 40.7
COL.COLO4_26040 Corchorus olitorius HOM05D000120 ORTHO05D009410 7.8e-34 148.3 252 39.3
TWI79G0897 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 1.7e-33 147.1 258 42.6
vmacro02052 Vaccinium macrocarpon HOM05D000120 ORTHO05D009410 3.3e-32 142.9 250 40.8
Eucgr.G01727 Eucalyptus grandis HOM05D000120 ORTHO05D009410 5.6e-32 142.1 251 39.8
Duzib248G0587 Durio zibethinus HOM05D000120 ORTHO05D009410 1.8e-30 137.1 259 37.1
Duzib132G0615 Durio zibethinus HOM05D000120 ORTHO05D009410 6.9e-30 135.2 258 35.7
RcHm_v2.0_Chr6g0267851 Rosa chinensis HOM05D000120 ORTHO05D009410 4.4e-29 132.5 252 37.7
Cfa005100 Carpinus fangiana HOM05D000722 ORTHO05D000590 5.8e-29 132.1 249 38.2
Ciclev10029808m.g Citrus clementina HOM05D000120 ORTHO05D009410 7.6e-29 131.7 263 37.6
GSVIVG01024178001 Vitis vinifera HOM05D000120 ORTHO05D009410 4.9e-28 129.0 250 39.2
TWI31G0702 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 8.4e-28 128.3 256 39.8
Actinidia02243 Actinidia chinensis HOM05D000120 ORTHO05D009410 1.1e-27 127.9 228 39.0
Manes.11G082300 Manihot esculenta HOM05D000120 ORTHO05D009410 1.4e-27 127.5 256 37.9
Haze_02260 Corylus avellana HOM05D000120 ORTHO05D009410 7.1e-27 125.2 252 37.3
Atru.chr5.3139 Acer truncatum HOM05D000120 ORTHO05D009410 9.3e-27 124.8 236 37.3
MD00G1040100 Malus domestica HOM05D000120 ORTHO05D009410 9.3e-27 124.8 255 35.3
Manes.04G083900 Manihot esculenta HOM05D000120 ORTHO05D009410 1.2e-26 124.4 249 36.9
MD10G1063700 Malus domestica HOM05D000120 ORTHO05D009410 4.6e-26 122.5 254 35.8
Sabra09G0095200 Salix brachista HOM05D000120 ORTHO05D009410 4.6e-26 122.5 263 35.7
Potri.009G124000 Populus trichocarpa HOM05D000120 ORTHO05D009410 5.1e-25 119.0 260 33.1
Oeu055633.1 Olea europaea HOM05D000120 ORTHO05D009410 8.7e-25 118.2 250 38.4
Prupe.8G085200 Prunus persica HOM05D000120 ORTHO05D009410 8.7e-25 118.2 226 36.3
FAN20G2164 Fragaria x ananassa HOM05D000120 ORTHO05D009410 1.5e-24 117.5 236 37.3
FvH4_2g10380 Fragaria vesca HOM05D000120 ORTHO05D009410 9.6e-24 114.8 245 35.5
Peaxi162Scf00016g10015 Petunia axillaris HOM05D000120 ORTHO05D009410 9.6e-24 114.8 251 35.5
FAN24G2037 Fragaria x ananassa HOM05D000120 ORTHO05D009410 4.8e-23 112.5 245 35.1
CsaV3_7G000360 Cucumis sativus L. HOM05D000120 ORTHO05D009410 8.1e-23 111.7 253 33.2
MSTRG.5421 Avicennia marina HOM05D000120 ORTHO05D009410 1.1e-22 111.3 231 33.3
Hma1.2p1_1244F.1_g270010 Hydrangea macrophylla HOM05D000120 ORTHO05D009410 1.8e-22 110.5 267 34.1
Lj3g0001494 Lotus japonicus HOM05D000120 ORTHO05D009410 4.0e-22 109.4 253 33.2
Lalb_Chr03g0030591 Lupinus albus HOM05D000120 ORTHO05D009410 4.0e-22 109.4 250 33.6
CiPaw.06G128400 Carya illinoinensis HOM05D000120 ORTHO05D009410 5.3e-22 109.0 229 35.8
Solyc01g110350.2 Solanum lycopersicum HOM05D000120 ORTHO05D009410 1.2e-21 107.8 247 36.0
Sopen01g052500 Solanum pennellii HOM05D000120 ORTHO05D009410 2.0e-21 107.1 242 36.0
arahy.Tifrunner.gnm1.ann1.X3J0BR Arachis hypogaea HOM05D000120 ORTHO05D009410 2.6e-21 106.7 252 34.5
Duzib052G0028 Durio zibethinus HOM05D000120 ORTHO05D009410 2.6e-21 106.7 252 31.7
Ca_27169_v3 Cicer arietinum L. HOM05D000120 ORTHO05D009410 5.8e-21 105.5 258 29.8
Gorai.008G031900 Gossypium raimondii HOM05D000120 ORTHO05D009410 5.8e-21 105.5 340 28.8
CANSAT11G1664 Cannabis sativa HOM05D000120 ORTHO05D009410 7.6e-21 105.1 238 34.5
Gohir.A12G041200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 1.3e-20 104.4 340 29.1
MELO3C002789.2 Cucumis melo HOM05D000120 ORTHO05D009410 8.4e-20 101.7 258 32.9
Potri.004G162300 Populus trichocarpa HOM05D000120 ORTHO05D009410 1.1e-19 101.3 242 36.0
Sed0018675 Sechium edule HOM05D000120 ORTHO05D009410 3.2e-19 99.8 292 30.5
Hund00217 Selenicereus undatus HOM05D000120 ORTHO05D000105 5.4e-19 99.0 265 31.7
Sc08g0000840 Simmondsia chinensis HOM05D000120 ORTHO05D009410 5.4e-19 99.0 245 34.7
VMungo1127G0720 Vigna mungo HOM05D000120 ORTHO05D009410 7.1e-19 98.6 261 33.3
Cc02_g16960 Coffea canephora HOM05D000120 ORTHO05D009410 9.3e-19 98.2 233 37.3
FAN27G2529 Fragaria x ananassa HOM05D000120 ORTHO05D009410 9.3e-19 98.2 214 34.6
Gohir.D12G031200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 9.3e-19 98.2 206 34.5
Phvul.011G156600 Phaseolus vulgaris HOM05D000120 ORTHO05D009410 9.3e-19 98.2 255 32.9
PGSC0003DMG400046163 Solanum tuberosum HOM05D000120 ORTHO05D009410 9.3e-19 98.2 244 34.0
TAR376G0786 Trochodendron aralioides HOM05D000120 ORTHO05D009410 2.1e-18 97.1 254 33.1
TAR628G1238 Trochodendron aralioides HOM05D000120 ORTHO05D009410 2.1e-18 97.1 257 33.5
Glyma.06G246300 Glycine max HOM05D000120 ORTHO05D009410 2.7e-18 96.7 283 30.4
Nn7g36692 Nelumbo nucifera HOM05D000120 ORTHO05D009410 6.0e-18 95.5 274 33.6
ClCG02G004590 Citrullus lanatus HOM05D000120 ORTHO05D009410 1.3e-17 94.4 245 31.0
Lsat_1_v5_gn_3_44160 Lactuca sativa HOM05D000120 ORTHO05D009410 3.0e-17 93.2 228 32.5
Cpa.g.sc150.20 Carica papaya HOM05D000120 ORTHO05D009410 3.3e-16 89.7 257 31.5
AUR62010396 Chenopodium quinoa HOM05D000120 ORTHO05D009410 3.3e-16 89.7 255 33.7
Nitab4.5_0017990g0010 Nicotiana tabacum HOM05D000120 ORTHO05D009410 5.6e-16 89.0 242 32.6
QL11p046369 Quercus lobata HOM05D000120 ORTHO05D009410 9.6e-16 88.2 385 25.5
unitig_747.g21207 Utricularia gibba HOM05D000120 ORTHO05D009410 1.3e-15 87.8 240 32.9
PSO210G7327 Papaver somniferum HOM05D000120 ORTHO05D009410 1.6e-15 87.4 273 30.8
TPR.G31517 Trifolium pratense HOM05D000120 ORTHO05D009410 2.1e-15 87.0 275 29.5
AUR62016822 Chenopodium quinoa HOM05D000120 ORTHO05D009410 4.8e-15 85.9 256 33.2
HanXRQChr15g0478301 Helianthus annuus HOM05D000120 ORTHO05D009410 1.1e-14 84.7 224 32.1
ECA240G4650 Erigeron canadensis HOM05D000120 ORTHO05D009410 3.1e-14 83.2 228 31.6
CAN.G170.96 Capsicum annuum HOM05D000120 ORTHO05D009410 1.2e-13 81.3 214 32.2
Aqoxy5G01485 Aquilegia oxysepala HOM05D000120 ORTHO05D009410 2.0e-13 80.5 242 32.6
SalBow6G2916 Salvia bowleyana HOM05D000120 ORTHO05D009410 9.9e-13 78.2 292 27.4
Sed0016080 Sechium edule HOM05D000120 ORTHO05D009410 1.7e-12 77.4 293 27.6
DCAR_022914 Daucus carota HOM05D000120 ORTHO05D009410 6.4e-12 75.5 242 29.3
SGA_v2.0_scaffold32G13221 Striga asiatica HOM05D000120 ORTHO05D009410 1.4e-11 74.3 239 28.5
Os02g0469000 Oryza sativa ssp. japonica HOM05D000120 ORTHO05D009410 1.1e-08 64.7 218 28.4
Migut.B00178 Erythranthe guttata HOM05D000120 ORTHO05D009410 4.3e-08 62.8 225 30.2
Psat4g137840 Pisum sativum HOM05D000120 ORTHO05D009410 5.6e-08 62.4 286 25.9
PSO170G1560 Papaver somniferum HOM05D000120 ORTHO05D009410 4.8e-07 59.3 108 37.0
Aa31LG6G16270 Aethionema arabicum HOM05D011065 ORTHO05D009410 8.1e-07 58.5 259 26.3
ATR0661G359 Amborella trichopoda HOM05D000120 ORTHO05D009410 5.3e-06 55.8 256 28.1
Thhalv10027283m.g Eutrema salsugineum HOM05D011065 ORTHO05D009410 6.9e-06 55.5 268 28.0


User provided reference genes

Program Settings