Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1420 Punica granatum HOM05D006722 ORTHO05D007944 5.9e-61 237.7 147 100.0
Prupe.3G234900 Prunus persica HOM05D006722 ORTHO05D007944 8.3e-15 84.3 131 39.7
RcHm_v2.0_Chr2g0162351 Rosa chinensis HOM05D006722 ORTHO05D007944 8.3e-15 84.3 127 51.2
MD17G1079900 Malus domestica HOM05D006722 ORTHO05D007944 1.3e-12 77.0 131 40.5
Atru.chr6.3036 Acer truncatum HOM05D006722 ORTHO05D007944 8.6e-12 74.3 131 39.7
Duzib132G0356 Durio zibethinus HOM05D006722 ORTHO05D007944 8.6e-12 74.3 126 39.7
Lj3g0001103 Lotus japonicus HOM05D006722 ORTHO05D007944 8.6e-12 74.3 128 40.6
Lj8C115G8 Lonicera japonica HOM05D000389 ORTHO05D000287 1.1e-11 73.9 113 41.6
FAN14G5843 Fragaria x ananassa HOM05D006722 ORTHO05D007944 1.5e-11 73.6 127 41.7
Thecc.02G175500 Theobroma cacao HOM05D006722 ORTHO05D007944 1.9e-11 73.2 123 41.5
TWI36G1477 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 2.5e-11 72.8 129 40.3
TAR141G0004 Trochodendron aralioides HOM05D006722 ORTHO05D007944 3.3e-11 72.4 144 43.8
TWI75G0677 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 1.2e-10 70.5 129 39.5
CSS0017413 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 1.6e-10 70.1 108 43.5
Oeu029927.1 Olea europaea HOM05D006722 ORTHO05D007944 3.6e-10 68.9 119 42.9
Migut.H01052 Erythranthe guttata HOM05D006722 ORTHO05D007944 4.7e-10 68.6 129 39.5
Rhsim06G0148700 Rhododendron simsii HOM05D006722 ORTHO05D007944 6.1e-10 68.2 129 38.0
Migut.H01053 Erythranthe guttata HOM05D006722 ORTHO05D007944 8.0e-10 67.8 125 38.4
ATR0693G370 Amborella trichopoda HOM05D041462 ORTHO05D007944 1.0e-09 67.4 125 38.4
Glyma.13G299400 Glycine max HOM05D006722 ORTHO05D007944 1.0e-09 67.4 130 37.7
CSS0029289 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 1.4e-09 67.0 103 43.7
Solyc07g054310.3 Solanum lycopersicum HOM05D006722 ORTHO05D007944 1.4e-09 67.0 106 39.6
Sopen07g028260 Solanum pennellii HOM05D006722 ORTHO05D007944 1.4e-09 67.0 106 39.6
CSS0036536 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 1.8e-09 66.6 128 45.3
COL.COLO4_35406 Corchorus olitorius HOM05D006722 ORTHO05D007944 1.8e-09 66.6 129 49.6
Lalb_Chr14g0366741 Lupinus albus HOM05D006722 ORTHO05D007944 1.8e-09 66.6 133 36.1
ECA246G2923 Erigeron canadensis HOM05D006722 ORTHO05D007944 2.3e-09 66.2 131 39.7
Migut.H01051 Erythranthe guttata HOM05D006722 ORTHO05D007944 3.1e-09 65.9 141 37.6
Oeu029925.1 Olea europaea HOM05D006722 ORTHO05D007944 3.1e-09 65.9 127 38.6
CANSAT64G0061 Cannabis sativa HOM05D006722 ORTHO05D007944 4.0e-09 65.5 144 38.2
Eucgr.A01793 Eucalyptus grandis HOM05D006722 ORTHO05D007944 4.0e-09 65.5 128 36.7
Peaxi162Scf00132g00074 Petunia axillaris HOM05D006722 ORTHO05D007944 5.2e-09 65.1 126 39.7
DCAR_006245 Daucus carota HOM05D006722 ORTHO05D007944 6.8e-09 64.7 131 35.9
Medtr4g037480 Medicago truncatula HOM05D006722 ORTHO05D007944 8.9e-09 64.3 135 37.8
Aa31LG8G17780 Aethionema arabicum HOM05D006722 ORTHO05D007944 1.2e-08 63.9 133 36.1
Hma1.2p1_0875F.1_g231440 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 1.2e-08 63.9 131 35.1
Rhsim04G0066600 Rhododendron simsii HOM05D006722 ORTHO05D007944 1.2e-08 63.9 131 39.7
Sp3g34120 Schrenkiella parvula HOM05D006722 ORTHO05D007944 1.2e-08 63.9 130 36.2
HanXRQChr17g0559971 Helianthus annuus HOM05D006722 ORTHO05D007944 1.5e-08 63.5 134 35.1
Lj3g0012520 Lotus japonicus HOM05D006722 ORTHO05D007944 1.5e-08 63.5 142 41.5
Rhsim06G0148800 Rhododendron simsii HOM05D006722 ORTHO05D007944 2.6e-08 62.8 128 48.4
DCAR_023670 Daucus carota HOM05D006722 ORTHO05D007944 3.4e-08 62.4 131 37.4
BcaB08g34945 Brassica carinata HOM05D006722 ORTHO05D007944 4.4e-08 62.0 131 34.4
Duzib052G0119 Durio zibethinus HOM05D006722 ORTHO05D007944 4.4e-08 62.0 137 36.5
Duzib052G0455 Durio zibethinus HOM05D006722 ORTHO05D007944 4.4e-08 62.0 137 36.5
MSTRG.14198 Avicennia marina HOM05D006722 ORTHO05D007944 5.8e-08 61.6 133 38.3
Thhalv10002109m.g Eutrema salsugineum HOM05D006722 ORTHO05D007944 5.8e-08 61.6 133 35.3
Ciclev10017219m.g Citrus clementina HOM05D006722 ORTHO05D007944 1.3e-07 60.5 131 35.1
FAN02G2988 Fragaria x ananassa HOM05D006722 ORTHO05D007944 1.7e-07 60.1 123 37.4
A09p58680 Brassica napus HOM05D006722 ORTHO05D007944 2.2e-07 59.7 131 32.8
Manes.13G149300 Manihot esculenta HOM05D006722 ORTHO05D007944 2.2e-07 59.7 145 36.6
TPR.G35552 Trifolium pratense HOM05D006722 ORTHO05D007944 2.2e-07 59.7 125 39.2
BcaC07g41191 Brassica carinata HOM05D006722 ORTHO05D007944 2.9e-07 59.3 131 32.8
C08p41970 Brassica napus HOM05D006722 ORTHO05D007944 2.9e-07 59.3 131 32.8
BolC8t51760H Brassica oleracea HOM05D006722 ORTHO05D007944 2.9e-07 59.3 131 32.8
BraA09t41254Z Brassica rapa HOM05D006722 ORTHO05D007944 2.9e-07 59.3 131 32.8
Glyma.06G296300 Glycine max HOM05D006722 ORTHO05D007944 2.9e-07 59.3 129 34.9
Medtr4g037560 Medicago truncatula HOM05D006722 ORTHO05D007944 2.9e-07 59.3 135 44.4
DCAR_006246 Daucus carota HOM05D006722 ORTHO05D007944 4.9e-07 58.5 121 37.2
AL3G54120 Arabidopsis lyrata HOM05D006722 ORTHO05D007944 8.3e-07 57.8 130 33.1
AT2G20870 Arabidopsis thaliana HOM05D006722 ORTHO05D007944 1.1e-06 57.4 140 30.0
Medtr2g090185 Medicago truncatula HOM05D006722 ORTHO05D007944 1.1e-06 57.4 127 34.6
ATR0693G039 Amborella trichopoda HOM05D041462 ORTHO05D007944 1.4e-06 57.0 131 35.1
Carub.0003s3553 Capsella rubella HOM05D006722 ORTHO05D007944 1.4e-06 57.0 133 32.3
VMungo1080G0484 Vigna mungo HOM05D006722 ORTHO05D007944 1.4e-06 57.0 136 45.6
CARHR111610 Cardamine hirsuta HOM05D006722 ORTHO05D007944 2.4e-06 56.2 131 34.4
PGSC0003DMG400018315 Solanum tuberosum HOM05D006722 ORTHO05D007944 4.1e-06 55.5 124 46.0
THA.LOC104824711 Tarenaya hassleriana HOM05D006722 ORTHO05D007944 4.1e-06 55.5 130 33.8
ClCG02G017440 Citrullus lanatus HOM05D006722 ORTHO05D007944 5.4e-06 55.1 128 34.4
Lsat_1_v5_gn_3_39421 Lactuca sativa HOM05D006722 ORTHO05D007944 5.4e-06 55.1 105 40.0
Ca_01515_v3 Cicer arietinum L. HOM05D006722 ORTHO05D007944 7.0e-06 54.7 129 37.2
Gohir.D12G141200 Gossypium hirsutum HOM05D006722 ORTHO05D007944 9.2e-06 54.3 126 38.9


User provided reference genes

Program Settings