Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 3.3e-56 221.5 112 100.0
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 1.3e-41 172.9 112 79.5
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 6.7e-41 170.6 112 75.0
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 8.7e-41 170.2 112 75.0
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 1.5e-40 169.5 112 77.7
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 3.3e-40 168.3 112 76.8
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 3.3e-40 168.3 111 78.4
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 4.3e-40 167.9 112 77.7
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 4.3e-40 167.9 112 74.1
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 9.7e-40 166.8 112 76.8
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 9.7e-40 166.8 112 77.7
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 1.3e-39 166.4 110 78.2
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 1.7e-39 166.0 111 76.6
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 2.2e-39 165.6 112 74.1
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 6.3e-39 164.1 112 75.9
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 6.3e-39 164.1 110 76.4
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 6.3e-39 164.1 110 76.4
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 6.3e-39 164.1 113 74.3
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 6.3e-39 164.1 112 75.9
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 8.2e-39 163.7 112 75.0
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 1.1e-38 163.3 112 74.1
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 1.1e-38 163.3 110 76.4
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 1.8e-38 162.5 110 75.5
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 1.8e-38 162.5 116 73.3
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 3.1e-38 161.8 114 71.1
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 3.1e-38 161.8 112 75.0
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 4.1e-38 161.4 111 73.0
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 4.1e-38 161.4 112 74.1
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 5.3e-38 161.0 112 75.0
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 5.3e-38 161.0 112 74.1
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 6.9e-38 160.6 114 71.1
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 6.9e-38 160.6 112 74.1
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 6.9e-38 160.6 112 72.3
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 9.1e-38 160.2 110 74.5
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 9.1e-38 160.2 112 73.2
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 9.1e-38 160.2 118 70.3
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 9.1e-38 160.2 110 72.7
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 1.5e-37 159.5 90 83.3
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 1.5e-37 159.5 114 71.1
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 1.5e-37 159.5 114 70.2
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 1.5e-37 159.5 114 71.1
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 1.5e-37 159.5 112 75.0
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 2.0e-37 159.1 110 73.6
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 2.6e-37 158.7 114 70.2
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 2.6e-37 158.7 112 73.2
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 4.5e-37 157.9 112 74.1
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 4.5e-37 157.9 112 69.6
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 4.5e-37 157.9 115 69.6
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 4.5e-37 157.9 112 73.2
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 5.9e-37 157.5 90 82.2
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 5.9e-37 157.5 112 75.0
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 7.7e-37 157.1 112 73.2
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.7e-36 156.0 112 72.3
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 1.7e-36 156.0 111 71.2
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 2.2e-36 155.6 115 67.0
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 2.2e-36 155.6 114 71.1
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 2.9e-36 155.2 112 70.5
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 2.9e-36 155.2 112 68.8
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 3.8e-36 154.8 113 69.0
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 3.8e-36 154.8 112 70.5
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 3.8e-36 154.8 112 70.5
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 3.8e-36 154.8 111 70.3
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 3.8e-36 154.8 112 71.4
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 5.0e-36 154.5 114 69.3
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 5.0e-36 154.5 114 69.3
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 5.0e-36 154.5 119 69.7
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 6.5e-36 154.1 112 72.3
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 8.5e-36 153.7 111 68.5
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 8.5e-36 153.7 111 69.4
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 8.5e-36 153.7 112 67.9
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 1.1e-35 153.3 112 67.0
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 1.4e-35 152.9 114 70.2
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 1.9e-35 152.5 115 67.8
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 2.5e-35 152.1 112 67.9
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 2.5e-35 152.1 77 87.0
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 2.5e-35 152.1 117 66.7
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 3.2e-35 151.8 113 69.0
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 3.2e-35 151.8 114 66.7
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 4.2e-35 151.4 115 65.2
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 5.5e-35 151.0 115 67.0
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 7.2e-35 150.6 103 69.9
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 9.4e-35 150.2 114 65.8
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 9.4e-35 150.2 112 67.9
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 9.4e-35 150.2 112 67.9
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 9.4e-35 150.2 112 67.9
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 6.1e-34 147.5 112 65.2
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 7.9e-34 147.1 116 66.4
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 7.9e-34 147.1 113 67.3
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 1.4e-33 146.4 126 62.7
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 3.0e-33 145.2 111 66.7
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 5.1e-33 144.4 121 63.6
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 6.7e-33 144.1 111 67.6
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 8.8e-33 143.7 111 68.5
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 4.4e-32 141.4 111 67.6
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 4.4e-32 141.4 66 95.5
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 5.7e-32 141.0 110 68.2
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 2.2e-31 139.0 112 61.6
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 8.2e-31 137.1 115 62.6
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 9.1e-30 133.7 82 73.2
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 9.1e-30 133.7 64 92.2
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 2.0e-29 132.5 110 60.9
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 4.5e-29 131.3 95 66.3
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 1.3e-28 129.8 82 74.4
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 8.5e-28 127.1 65 89.2
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 7.2e-27 124.0 111 55.9
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 1.2e-26 123.2 62 90.3
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 2.7e-26 122.1 100 64.0
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 2.7e-26 122.1 72 72.2
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 1.4e-25 119.8 118 55.1
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 5.2e-25 117.9 107 58.9
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 3.3e-24 115.2 65 83.1
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 1.1e-22 110.2 76 68.4
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 2.1e-18 95.9 75 76.0
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 8.0e-18 94.0 77 61.0
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 6.3e-15 84.3 75 66.7
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 8.2e-15 84.0 74 58.1
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 3.1e-14 82.0 76 61.8
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 4.2e-11 71.6 72 52.8
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 3.0e-09 65.5 35 77.1


User provided reference genes

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