Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 7.1e-162 573.9 304 100.0
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 3.5e-116 422.2 305 72.5
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 3.2e-114 415.6 295 73.9
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 3.6e-113 412.1 277 75.5
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.4e-112 410.2 288 74.0
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 1.5e-111 406.8 246 81.7
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 2.6e-111 406.0 303 70.0
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 3.4e-111 405.6 295 73.9
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.3e-110 403.7 263 76.0
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.3e-110 403.7 263 75.7
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 2.2e-110 402.9 274 75.9
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 2.2e-110 402.9 250 78.4
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 3.7e-110 402.1 267 76.0
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 3.7e-110 402.1 304 71.7
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 6.3e-110 401.4 298 70.1
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 8.3e-110 401.0 277 74.0
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 1.2e-108 397.1 299 70.2
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 2.7e-108 396.0 309 67.3
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 5.9e-108 394.8 310 70.0
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 7.7e-108 394.4 306 69.3
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 7.7e-108 394.4 309 69.9
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 7.7e-108 394.4 245 80.0
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 2.3e-107 392.9 290 70.7
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 3.8e-107 392.1 341 63.9
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 5.0e-107 391.7 291 70.4
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 6.6e-107 391.3 310 67.7
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 6.6e-107 391.3 302 70.2
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 6.6e-107 391.3 282 74.1
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 6.6e-107 391.3 286 72.0
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.9e-106 389.8 298 69.1
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 1.2e-105 387.1 309 67.0
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 2.1e-105 386.3 263 74.5
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 2.1e-105 386.3 289 71.3
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 3.6e-105 385.6 253 75.9
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 1.0e-104 384.0 275 72.4
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 1.4e-104 383.6 270 73.3
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 1.4e-104 383.6 248 79.4
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 4.0e-104 382.1 279 70.6
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 4.0e-104 382.1 284 71.1
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 4.0e-104 382.1 284 71.1
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 8.9e-104 380.9 279 70.6
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 1.2e-103 380.6 248 77.0
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 1.2e-103 380.6 300 67.3
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 3.4e-103 379.0 277 70.4
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 5.7e-103 378.3 212 86.3
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 7.5e-103 377.9 247 76.1
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 7.5e-103 377.9 272 72.1
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 7.5e-103 377.9 283 69.6
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 1.3e-102 377.1 331 62.2
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 1.7e-102 376.7 303 66.3
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 1.7e-102 376.7 284 70.8
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 3.7e-102 375.6 284 70.4
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 4.9e-102 375.2 305 66.2
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 1.1e-101 374.0 242 76.9
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 1.4e-101 373.6 262 71.0
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 1.8e-101 373.2 312 65.1
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 1.8e-101 373.2 279 69.2
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 4.1e-101 372.1 286 69.6
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 7.0e-101 371.3 286 69.2
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 9.2e-101 370.9 239 78.7
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 1.2e-100 370.5 211 84.8
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 1.2e-100 370.5 211 84.8
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 1.2e-100 370.5 210 84.8
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 2.0e-100 369.8 301 65.4
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 2.7e-100 369.4 317 64.0
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 2.7e-100 369.4 211 84.4
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 3.5e-100 369.0 300 65.0
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 1.0e-99 367.5 316 63.9
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 1.0e-99 367.5 294 67.7
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 2.3e-99 366.3 317 63.1
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 2.9e-99 365.9 305 64.6
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 3.9e-99 365.5 241 75.9
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 6.6e-99 364.8 280 67.9
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 6.6e-99 364.8 301 68.8
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 6.6e-99 364.8 301 68.8
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 8.6e-99 364.4 302 64.2
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 1.1e-98 364.0 300 65.7
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 1.1e-98 364.0 315 63.8
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 1.9e-98 363.2 274 67.9
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 2.5e-98 362.8 333 63.1
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 5.6e-98 361.7 315 63.2
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 1.2e-97 360.5 386 54.9
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 1.2e-97 360.5 257 71.6
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 1.2e-97 360.5 303 64.4
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 2.1e-97 359.8 271 69.4
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 3.6e-97 359.0 332 60.8
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 6.1e-97 358.2 317 62.8
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 8.0e-97 357.8 314 63.1
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.8e-96 356.7 317 62.8
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 3.1e-96 355.9 317 62.5
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 6.8e-96 354.8 250 74.0
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 1.2e-95 354.0 246 72.8
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 2.6e-95 352.8 245 72.7
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 2.2e-94 349.7 293 62.5
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 8.3e-94 347.8 212 77.4
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 1.1e-93 347.4 223 76.7
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 2.2e-86 323.2 255 63.5
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 6.4e-86 321.6 307 59.3
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 9.9e-79 297.7 258 62.8
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 3.7e-78 295.8 193 76.2
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 3.7e-78 295.8 280 58.9
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.5e-74 283.9 209 70.8
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 3.6e-73 279.3 286 56.3
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 4.7e-73 278.9 206 64.6
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 1.5e-71 273.9 202 63.9
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 3.2e-69 266.2 250 59.6
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 8.1e-65 251.5 229 60.7
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 5.3e-64 248.8 196 61.2
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 2.2e-38 163.7 177 54.8
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 2.2e-38 163.7 279 39.4
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.2e-36 157.9 95 86.3
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 1.4e-32 144.4 152 48.7
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 4.5e-31 139.4 94 77.7
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 1.9e-29 134.0 210 36.7
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 3.2e-29 133.3 302 33.1
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 3.0e-27 126.7 128 55.5
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 2.6e-23 113.6 131 43.5
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 5.3e-08 62.8 114 37.7


User provided reference genes

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