Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 1.9e-67 259.2 152 100.0
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 1.5e-59 233.0 152 90.1
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 3.0e-28 129.0 148 58.1
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 8.8e-28 127.5 147 64.6
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 9.8e-27 124.0 146 58.2
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 9.8e-27 124.0 146 58.2
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 3.7e-26 122.1 148 60.8
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 3.7e-26 122.1 148 52.7
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 3.7e-26 122.1 148 52.7
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 1.4e-25 120.2 148 55.4
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.4e-25 120.2 148 52.0
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 1.4e-25 120.2 147 63.9
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 2.4e-25 119.4 148 52.0
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 3.1e-25 119.0 147 54.4
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 4.1e-25 118.6 152 53.3
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 5.4e-25 118.2 147 57.1
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 9.1e-25 117.5 146 59.6
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 1.2e-24 117.1 147 57.1
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.2e-24 117.1 149 51.0
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 5.9e-24 114.8 147 55.8
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 1.0e-23 114.0 145 53.8
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 2.9e-23 112.5 148 58.8
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 3.8e-23 112.1 147 58.5
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 3.8e-23 112.1 147 61.2
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 6.5e-23 111.3 148 52.7
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 1.1e-22 110.5 146 52.1
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.5e-22 110.2 148 52.7
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 3.2e-22 109.0 149 61.1
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 3.2e-22 109.0 147 49.0
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 4.2e-22 108.6 145 53.1
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 4.2e-22 108.6 146 52.7
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 1.2e-21 107.1 146 60.3
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 2.1e-21 106.3 147 57.1
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 2.1e-21 106.3 147 57.1
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 3.6e-21 105.5 148 52.7
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 6.1e-21 104.8 146 53.4
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 6.1e-21 104.8 148 49.3
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 6.1e-21 104.8 150 48.0
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 1.0e-20 104.0 146 48.6
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 1.8e-20 103.2 146 52.7
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 2.3e-20 102.8 147 60.5
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 5.2e-20 101.7 147 49.0
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 6.8e-20 101.3 149 55.7
VMungo1215G0575 Vigna mungo HOM05D006398 ORTHO05D007983 8.8e-20 100.9 143 58.0
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 1.2e-19 100.5 148 48.0
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 1.5e-19 100.1 143 56.6
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 2.0e-19 99.8 146 45.2
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 2.6e-19 99.4 147 55.1
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 2.6e-19 99.4 146 47.9
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 3.4e-19 99.0 130 56.2
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 3.4e-19 99.0 153 48.4
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 3.4e-19 99.0 147 49.7
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 4.4e-19 98.6 146 46.6
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 7.5e-19 97.8 136 53.7
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.7e-18 96.7 91 62.6
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 1.7e-18 96.7 148 54.7
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 2.2e-18 96.3 149 48.3
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 2.8e-18 95.9 87 64.4
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 3.7e-18 95.5 147 48.3
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 4.9e-18 95.1 133 51.9
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 4.9e-18 95.1 146 45.2
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 1.1e-17 94.0 139 60.4
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 1.1e-17 94.0 147 49.7
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 1.1e-17 94.0 129 47.3
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 1.4e-17 93.6 131 50.4
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.8e-17 93.2 142 54.2
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 2.4e-17 92.8 92 60.9
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 7.0e-17 91.3 92 60.9
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 1.6e-16 90.1 93 77.4
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 2.0e-16 89.7 132 47.0
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 7.8e-16 87.8 93 61.3
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 1.0e-15 87.4 129 58.9
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.3e-15 87.0 91 72.5
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 1.3e-15 87.0 154 44.8
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 1.7e-15 86.7 146 42.5
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 2.3e-15 86.3 146 42.5
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 2.3e-15 86.3 143 53.8
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 2.9e-15 85.9 146 47.3
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 2.9e-15 85.9 146 41.8
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 3.8e-15 85.5 139 43.9
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 3.8e-15 85.5 153 41.2
CAN.G883.23 Capsicum annuum HOM05D006398 ORTHO05D007983 8.6e-15 84.3 151 49.0
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 7.3e-14 81.3 90 56.7
TAR628G0945 Trochodendron aralioides HOM05D006398 ORTHO05D007983 1.2e-13 80.5 108 52.8
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 2.1e-13 79.7 93 51.6
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 1.0e-12 77.4 86 66.3
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 2.3e-12 76.3 145 40.0
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 3.0e-12 75.9 101 46.5
Sc03g0004180 Simmondsia chinensis HOM05D006398 ORTHO05D007983 1.2e-11 73.9 147 51.0
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 5.7e-11 71.6 153 38.6
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 7.5e-11 71.2 66 57.6
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 1.7e-10 70.1 147 36.7
AT3G51500 Arabidopsis thaliana HOM05D006398 ORTHO05D007983 1.4e-09 67.0 102 58.8
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 2.4e-09 66.2 162 37.7
Cpa.g.sc178.36 Carica papaya HOM05D006398 ORTHO05D007983 3.2e-09 65.9 105 45.7
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 5.4e-09 65.1 156 37.2
Lalb_Chr05g0215011 Lupinus albus HOM05D006398 ORTHO05D007983 9.2e-09 64.3 145 46.2
Zm00001eb236520 Zea mays HOM05D006398 ORTHO05D007983 9.2e-09 64.3 92 58.7
Carub.0005s1788 Capsella rubella HOM05D006398 ORTHO05D007983 1.2e-08 63.9 102 56.9
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 2.0e-08 63.2 138 38.4
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 3.5e-08 62.4 93 45.2
THA.LOC109117268 Tarenaya hassleriana HOM05D006398 ORTHO05D007983 7.8e-08 61.2 90 61.1
CARHR161080 Cardamine hirsuta HOM05D006398 ORTHO05D007983 1.7e-07 60.1 102 53.9
AL5G31940 Arabidopsis lyrata HOM05D006398 ORTHO05D007983 3.0e-07 59.3 103 57.3
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 8.6e-07 57.8 95 58.9
Aa31LG4G7260 Aethionema arabicum HOM05D000087 ORTHO05D002585 1.9e-06 56.6 66 71.2
SHI11157 Sapria himalayana HOM05D006398 ORTHO05D007983 1.9e-06 56.6 112 41.1
Sp5g10740 Schrenkiella parvula HOM05D006398 ORTHO05D007983 1.9e-06 56.6 105 57.1


User provided reference genes

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