Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 2.4e-67 258.8 145 100.0
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 2.4e-38 162.5 145 67.6
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 4.0e-38 161.8 145 66.2
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 1.2e-37 160.2 147 65.3
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 1.5e-37 159.8 147 65.3
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 1.5e-37 159.8 147 67.3
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 3.4e-37 158.7 147 65.3
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 4.5e-37 158.3 144 66.7
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 9.9e-37 157.1 143 64.3
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 3.8e-36 155.2 147 64.6
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 6.4e-36 154.5 147 64.6
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 8.4e-36 154.1 147 63.9
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 2.4e-35 152.5 145 64.8
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 3.2e-35 152.1 147 63.9
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 1.6e-34 149.8 146 61.6
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 1.6e-34 149.8 146 63.0
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 2.7e-34 149.1 148 63.5
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 3.5e-34 148.7 147 63.3
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 6.0e-34 147.9 145 64.8
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 1.0e-33 147.1 146 61.6
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 1.8e-33 146.4 143 62.2
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 1.8e-33 146.4 147 61.2
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 3.0e-33 145.6 145 62.8
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 3.0e-33 145.6 146 60.3
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 3.0e-33 145.6 150 64.7
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 6.7e-33 144.4 146 60.3
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 8.7e-33 144.1 146 61.0
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 1.1e-32 143.7 144 60.4
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 1.1e-32 143.7 150 62.7
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 2.5e-32 142.5 147 59.9
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 4.3e-32 141.7 147 61.2
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 5.6e-32 141.4 146 58.9
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 7.4e-32 141.0 147 60.5
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 1.3e-31 140.2 136 66.2
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 2.1e-31 139.4 146 60.3
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 2.1e-31 139.4 148 61.5
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 2.8e-31 139.0 146 58.9
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 2.8e-31 139.0 145 59.3
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 2.8e-31 139.0 147 59.2
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 3.7e-31 138.7 147 61.2
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 3.7e-31 138.7 148 60.8
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 3.7e-31 138.7 138 65.2
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 6.2e-31 137.9 146 58.9
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 8.1e-31 137.5 147 59.9
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 1.1e-30 137.1 147 59.2
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 2.4e-30 136.0 147 58.5
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 3.1e-30 135.6 147 59.2
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 3.1e-30 135.6 140 57.9
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 5.3e-30 134.8 132 62.1
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 9.0e-30 134.0 147 57.8
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 1.2e-29 133.7 147 55.1
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 2.0e-29 132.9 146 58.2
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 2.0e-29 132.9 147 59.9
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 2.0e-29 132.9 136 61.0
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 3.4e-29 132.1 148 56.8
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 4.5e-29 131.7 147 58.5
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 4.5e-29 131.7 150 56.0
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 5.8e-29 131.3 147 57.1
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 5.8e-29 131.3 149 59.7
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 1.7e-28 129.8 148 58.1
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 2.9e-28 129.0 152 57.2
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 2.9e-28 129.0 147 57.8
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 2.9e-28 129.0 147 60.5
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 2.9e-28 129.0 147 55.1
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 3.8e-28 128.6 150 56.0
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 4.9e-28 128.3 148 54.7
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 8.4e-28 127.5 149 56.4
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 1.9e-27 126.3 147 55.8
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 2.4e-27 125.9 152 54.6
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 2.4e-27 125.9 157 52.9
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 3.2e-27 125.6 151 56.3
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 3.2e-27 125.6 151 56.3
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 4.2e-27 125.2 151 55.6
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 4.2e-27 125.2 151 55.6
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 5.5e-27 124.8 153 54.9
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 9.3e-27 124.0 127 59.1
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 1.2e-26 123.6 88 76.1
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.2e-26 123.6 145 57.2
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 2.7e-26 122.5 159 50.3
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 4.6e-26 121.7 151 56.3
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 7.9e-26 120.9 154 53.2
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 7.9e-26 120.9 95 72.6
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.3e-25 120.2 134 60.4
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 1.3e-25 120.2 151 54.3
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 1.8e-25 119.8 138 55.8
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 2.3e-25 119.4 148 54.1
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 2.3e-25 119.4 111 63.1
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 6.7e-25 117.9 145 49.7
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.5e-24 116.7 134 59.0
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 2.5e-24 115.9 108 60.2
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 2.5e-24 115.9 81 77.8
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 4.3e-24 115.2 76 80.3
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 5.6e-24 114.8 138 54.3
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 9.6e-24 114.0 138 53.6
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 2.1e-23 112.8 76 76.3
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 3.7e-23 112.1 145 56.6
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 1.5e-21 106.7 77 75.3
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 4.5e-21 105.1 133 53.4
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 5.8e-21 104.8 149 51.0
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 4.2e-19 98.6 119 53.8
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 9.3e-19 97.4 133 49.6
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 3.5e-18 95.5 82 64.6
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 3.5e-18 95.5 74 63.5
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 3.1e-14 82.4 113 46.0
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 6.9e-14 81.3 92 48.9
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 6.9e-14 81.3 115 46.1
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 2.0e-13 79.7 98 54.1
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 3.4e-13 79.0 52 78.8
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 4.5e-13 78.6 97 46.4
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 4.5e-13 78.6 86 51.2
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 2.2e-12 76.3 126 41.3
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 3.8e-12 75.5 83 55.4
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 9.4e-11 70.9 113 46.9
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 2.1e-10 69.7 81 48.1
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.7e-07 60.1 94 43.6
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 5.3e-06 55.1 31 80.6


User provided reference genes

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