Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1193 Punica granatum HOM05D006195 ORTHO05D007710 4.9e-254 880.6 422 100.0
Eucgr.E03701 Eucalyptus grandis HOM05D006195 ORTHO05D007710 4.7e-188 661.4 387 77.5
CiPaw.09G158100 Carya illinoinensis HOM05D006195 ORTHO05D007710 1.4e-184 649.8 413 72.9
QL04p018330 Quercus lobata HOM05D006195 ORTHO05D007710 1.4e-184 649.8 394 76.1
Prupe.4G036600 Prunus persica HOM05D006195 ORTHO05D007710 1.2e-183 646.7 411 73.5
Gorai.009G173800 Gossypium raimondii HOM05D006195 ORTHO05D007710 1.3e-182 643.3 387 76.7
Gohir.A05G165600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 1.7e-182 642.9 410 73.7
MD10G1303200 Malus domestica HOM05D006195 ORTHO05D007710 6.6e-182 641.0 412 72.1
Gohir.D05G168600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 1.5e-181 639.8 387 76.2
TWI38G0511 Tripterygium wilfordii HOM05D006195 ORTHO05D007710 3.3e-181 638.6 416 72.4
Thecc.06G199000 Theobroma cacao HOM05D006195 ORTHO05D007710 7.3e-181 637.5 405 73.1
Atru.chr10.2006 Acer truncatum HOM05D006195 ORTHO05D007710 2.8e-180 635.6 404 74.3
GSVIVG01003194001 Vitis vinifera HOM05D006195 ORTHO05D007710 1.5e-178 629.8 405 72.1
Cpa.g.sc27.120 Carica papaya HOM05D006195 ORTHO05D007710 2.0e-178 629.4 416 70.2
COL.COLO4_31584 Corchorus olitorius HOM05D006195 ORTHO05D007710 3.7e-177 625.2 410 71.7
Potri.011G043000 Populus trichocarpa HOM05D006195 ORTHO05D007710 2.4e-176 622.5 379 76.0
Ciclev10015313m.g Citrus clementina HOM05D006195 ORTHO05D007710 5.4e-176 621.3 418 70.6
Actinidia24060 Actinidia chinensis HOM05D006195 ORTHO05D007710 1.2e-175 620.2 401 70.8
CANSAT56G3748 Cannabis sativa HOM05D006195 ORTHO05D007710 1.6e-175 619.8 415 71.1
ClCG03G005530 Citrullus lanatus HOM05D006195 ORTHO05D007710 1.6e-175 619.8 405 70.9
CsaV3_1G011800 Cucumis sativus L. HOM05D006195 ORTHO05D007710 1.6e-175 619.8 408 70.1
HanXRQChr14g0437281 Helianthus annuus HOM05D006195 ORTHO05D007710 1.6e-175 619.8 387 73.4
RcHm_v2.0_Chr5g0006371 Rosa chinensis HOM05D006195 ORTHO05D007710 2.7e-175 619.0 418 69.4
Sed0022279 Sechium edule HOM05D006195 ORTHO05D007710 1.0e-174 617.1 404 70.0
FvH4_3g04030 Fragaria vesca HOM05D006195 ORTHO05D007710 1.3e-174 616.7 415 70.4
Lsat_1_v5_gn_7_19641 Lactuca sativa HOM05D006195 ORTHO05D007710 3.0e-174 615.5 389 73.0
MD05G1325300 Malus domestica HOM05D006195 ORTHO05D007710 8.6e-174 614.0 416 70.4
Sc17g0006620 Simmondsia chinensis HOM05D006195 ORTHO05D007710 1.9e-173 612.8 393 71.8
EL10Ac8g20527 Beta vulgaris HOM05D006195 ORTHO05D007710 3.3e-173 612.1 386 71.2
Rhsim02G0120000 Rhododendron simsii HOM05D006195 ORTHO05D007710 3.3e-173 612.1 430 67.0
MBI14_g15641_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 9.5e-173 610.5 421 68.2
Cfa000355 Carpinus fangiana HOM05D006195 ORTHO05D007710 1.6e-172 609.8 415 70.8
Haze_06571 Corylus avellana HOM05D006195 ORTHO05D007710 3.6e-172 608.6 389 73.8
Cc02_g12450 Coffea canephora HOM05D006195 ORTHO05D007710 6.2e-172 607.8 396 69.7
Sopen02g023920 Solanum pennellii HOM05D006195 ORTHO05D007710 3.1e-171 605.5 405 69.4
AT4G21520 Arabidopsis thaliana HOM05D006195 ORTHO05D007710 6.8e-171 604.4 402 68.4
Solyc02g079110.3 Solanum lycopersicum HOM05D006195 ORTHO05D007710 6.8e-171 604.4 405 69.4
FAN11G1039 Fragaria x ananassa HOM05D006195 ORTHO05D007710 1.2e-170 603.6 419 68.7
arahy.Tifrunner.gnm1.ann1.IWY5CJ Arachis hypogaea HOM05D006195 ORTHO05D007710 2.6e-170 602.4 395 70.4
Medtr4g091080 Medicago truncatula HOM05D006195 ORTHO05D007710 2.6e-170 602.4 411 68.9
arahy.Tifrunner.gnm1.ann1.HDHM3Z Arachis hypogaea HOM05D006195 ORTHO05D007710 3.4e-170 602.1 391 70.8
Lj2A280G38 Lonicera japonica HOM05D006195 ORTHO05D007710 4.4e-170 601.7 440 65.7
TAR629G3096 Trochodendron aralioides HOM05D006195 ORTHO05D007710 4.4e-170 601.7 393 71.2
Aqoxy1G02740 Aquilegia oxysepala HOM05D006195 ORTHO05D007710 7.6e-170 600.9 389 70.7
PSO675G1294 Papaver somniferum HOM05D006195 ORTHO05D007710 7.6e-170 600.9 405 68.6
Thhalv10025271m.g Eutrema salsugineum HOM05D006195 ORTHO05D007710 2.9e-169 599.0 394 69.3
BcaNung02791 Brassica carinata HOM05D006195 ORTHO05D007710 3.8e-169 598.6 397 68.8
Manes.17G039200 Manihot esculenta HOM05D006195 ORTHO05D007710 3.8e-169 598.6 387 72.9
Carub.0007s1990 Capsella rubella HOM05D006195 ORTHO05D007710 6.4e-169 597.8 405 67.7
PGSC0003DMG400022408 Solanum tuberosum HOM05D006195 ORTHO05D007710 6.4e-169 597.8 390 70.5
AL7G32530 Arabidopsis lyrata HOM05D006195 ORTHO05D007710 8.4e-169 597.4 393 69.0
Lalb_Chr09g0327371 Lupinus albus HOM05D006195 ORTHO05D007710 8.4e-169 597.4 395 68.4
Oeu038214.1 Olea europaea HOM05D006195 ORTHO05D007710 1.1e-168 597.0 415 66.7
vmacro15867 Vaccinium macrocarpon HOM05D006195 ORTHO05D007710 2.4e-168 595.9 386 71.2
C01p15450 Brassica napus HOM05D006195 ORTHO05D007710 3.2e-168 595.5 410 68.0
BolC1t01499H Brassica oleracea HOM05D006195 ORTHO05D007710 3.2e-168 595.5 410 68.0
Sp7g19630 Schrenkiella parvula HOM05D006195 ORTHO05D007710 3.2e-168 595.5 404 67.6
CARHR228180 Cardamine hirsuta HOM05D006195 ORTHO05D007710 9.2e-168 594.0 406 66.7
THA.LOC104806275 Tarenaya hassleriana HOM05D006195 ORTHO05D007710 9.2e-168 594.0 402 68.2
A01p12830 Brassica napus HOM05D006195 ORTHO05D007710 2.7e-167 592.4 410 67.1
Ca_18483_v3 Cicer arietinum L. HOM05D006195 ORTHO05D007710 2.7e-167 592.4 426 65.7
Duzib235G1322 Durio zibethinus HOM05D006195 ORTHO05D007710 3.5e-167 592.0 406 68.5
BraA01t01227Z Brassica rapa HOM05D006195 ORTHO05D007710 7.8e-167 590.9 411 66.7
VMungo0251G2515 Vigna mungo HOM05D006195 ORTHO05D007710 1.0e-166 590.5 386 71.0
Aa31LG6G3540 Aethionema arabicum HOM05D006195 ORTHO05D007710 3.9e-166 588.6 393 68.4
SGA_v2.0_scaffold7G03951 Striga asiatica HOM05D006195 ORTHO05D007710 3.9e-166 588.6 417 65.9
Phvul.002G222200 Phaseolus vulgaris HOM05D006195 ORTHO05D007710 6.6e-166 587.8 403 67.7
Nitab4.5_0009994g0040 Nicotiana tabacum HOM05D006195 ORTHO05D007710 2.1e-164 582.8 445 63.8
Migut.M01211 Erythranthe guttata HOM05D006195 ORTHO05D007710 2.8e-164 582.4 413 66.1
Migut.I00196 Erythranthe guttata HOM05D006195 ORTHO05D007710 4.7e-164 581.6 372 71.2
Peaxi162Scf00355g00914 Petunia axillaris HOM05D006195 ORTHO05D007710 8.1e-164 580.9 421 66.0
MSTRG.8639 Avicennia marina HOM05D006195 ORTHO05D007710 1.1e-163 580.5 392 67.6
ECA236G2696 Erigeron canadensis HOM05D006195 ORTHO05D007710 4.0e-163 578.6 348 75.3
TPR.G32422 Trifolium pratense HOM05D006195 ORTHO05D007710 6.9e-163 577.8 382 69.9
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 1.2e-162 577.0 345 77.4
SalBow8G2471 Salvia bowleyana HOM05D006195 ORTHO05D007710 4.4e-162 575.1 404 66.3
Glyma.07G190200 Glycine max HOM05D006195 ORTHO05D007710 1.7e-161 573.2 415 66.0
FAN25G3765 Fragaria x ananassa HOM05D006195 ORTHO05D007710 7.1e-160 567.8 435 64.4
ATR0693G097 Amborella trichopoda HOM05D006195 ORTHO05D007710 6.0e-159 564.7 387 67.4
Lj4g0017156 Lotus japonicus HOM05D006195 ORTHO05D007710 1.1e-157 560.5 397 66.5
Os03g0738000 Oryza sativa ssp. japonica HOM05D006195 ORTHO05D007710 2.1e-156 556.2 379 67.3
CSS0049192 Camellia sinensis var. sinensis HOM05D006195 ORTHO05D007710 9.9e-154 547.4 359 70.2
MELO3C002557.2 Cucumis melo HOM05D006195 ORTHO05D007710 4.9e-153 545.0 404 64.9
FAN21G3429 Fragaria x ananassa HOM05D006195 ORTHO05D007710 1.1e-152 543.9 429 62.9
DCAR_008069 Daucus carota HOM05D006195 ORTHO05D007710 1.6e-148 530.0 420 60.0
Ah.14g088920 Amaranthus hybridus HOM05D006195 ORTHO05D007710 2.4e-147 526.2 409 61.6
Zm00001eb056530 Zea mays HOM05D006195 ORTHO05D007710 6.0e-143 511.5 421 59.9
Pp3c6_22670 Physcomitrium patens HOM05D006195 ORTHO05D007710 3.0e-142 509.2 406 60.1
AUR62014719 Chenopodium quinoa HOM05D006195 ORTHO05D007710 1.9e-141 506.5 421 60.6
Mapoly0082s0056 Marchantia polymorpha HOM05D006195 ORTHO05D007710 6.2e-140 501.5 388 60.3
CDE11G0466 Ceratophyllum demersum HOM05D006195 ORTHO05D007710 2.0e-138 496.5 336 66.4
AagrBONN_evm.TU.Sc2ySwM_344.4192 Anthoceros agrestis HOM05D006195 ORTHO05D007710 3.8e-137 492.3 390 60.0
AUR62016899 Chenopodium quinoa HOM05D006195 ORTHO05D007710 6.0e-135 485.0 409 59.4
MBI14_g13652_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 3.8e-129 465.7 418 57.2
Nitab4.5_0000190g0110 Nicotiana tabacum HOM05D006195 ORTHO05D007710 2.3e-126 456.4 318 67.9
SMO137G0351 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 1.5e-125 453.8 368 57.1
Hund23609 Selenicereus undatus HOM05D006195 ORTHO05D007710 2.6e-122 443.0 311 67.8
Dinv40483 Davidia involucrata HOM05D006195 ORTHO05D007710 3.8e-121 439.1 296 69.6
Psat7g108560 Pisum sativum HOM05D006195 ORTHO05D007710 6.5e-121 438.3 276 72.8
unitig_37.g12337 Utricularia gibba HOM05D006195 ORTHO05D007710 1.2e-119 434.1 396 55.3
CBR_g41455 Chara braunii HOM05D006195 ORTHO05D007710 5.7e-117 425.2 376 53.2
CBR_g20417 Chara braunii HOM05D006195 ORTHO05D007710 3.1e-115 419.5 434 48.4
Eucgr.L01396 Eucalyptus grandis HOM05D006195 ORTHO05D007710 2.2e-100 370.2 246 70.3
Potri.004G034600 Populus trichocarpa HOM05D006195 ORTHO05D007710 4.1e-91 339.3 245 66.1
SMO116G0485 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 1.5e-85 320.9 278 54.3
Cre07.g326350 Chlamydomonas reinhardtii HOM05D006195 ORTHO05D007710 4.9e-84 315.8 417 42.0
HPP92_018057 Vanilla planifolia HOM05D006195 ORTHO05D007710 1.0e-81 308.1 299 50.8
TPR.G37128 Trifolium pratense HOM05D006195 ORTHO05D007710 4.3e-80 302.8 179 75.4
Nn1g03899 Nelumbo nucifera HOM05D006195 ORTHO05D007710 2.3e-78 297.0 442 41.2
SalBow6G2099 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.9e-75 287.3 167 75.4
SalBow6G4337 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.9e-75 287.3 167 75.4
MCO07G204 Micromonas commoda HOM05D006195 ORTHO05D007710 1.9e-72 277.3 395 39.5
SalBow1G5137 Salvia bowleyana HOM05D006195 ORTHO05D007710 4.3e-64 249.6 146 75.3
Manes.10G084901 Manihot esculenta HOM05D006195 ORTHO05D007710 4.2e-51 206.5 127 77.2
Dinv18994 Davidia involucrata HOM05D006195 ORTHO05D007710 1.1e-48 198.4 226 48.2
GSVIVG01003189001 Vitis vinifera HOM05D006195 ORTHO05D007710 2.8e-47 193.7 129 69.0
SalBow4G2205 Salvia bowleyana HOM05D006195 ORTHO05D007710 2.2e-44 184.1 99 79.8
PRCOL_00004057 Prasinoderma coloniale HOM05D006195 ORTHO05D007710 5.4e-43 179.5 357 32.8
SHI02125 Sapria himalayana HOM05D006195 ORTHO05D007710 2.8e-39 167.2 101 69.3
SalBow1G7985 Salvia bowleyana HOM05D006195 ORTHO05D007710 6.2e-39 166.0 115 67.0
CSS0050458 Camellia sinensis var. sinensis HOM05D000911 ORTHO05D007710 1.5e-37 161.4 90 77.8
Nitab4.5_0003834g0010 Nicotiana tabacum HOM05D006195 ORTHO05D007710 4.5e-37 159.8 93 77.4
Thecc.06G199100 Theobroma cacao HOM05D006195 ORTHO05D007710 7.6e-37 159.1 101 70.3
SHI48938 Sapria himalayana HOM05D006195 ORTHO05D007710 2.8e-31 140.6 104 60.6
SEGI_17138 Sequoiadendron giganteum HOM05D006195 ORTHO05D007710 3.8e-28 130.2 80 66.2
HPP92_018063 Vanilla planifolia HOM05D006195 ORTHO05D007710 7.4e-24 115.9 155 40.0
SHI02124 Sapria himalayana HOM05D006195 ORTHO05D007710 6.9e-22 109.4 208 36.5
AL117U10020 Arabidopsis lyrata HOM05D064442 ORTHO05D011622 5.5e-19 99.8 114 47.4
Nitab4.5_0004238g0040 Nicotiana tabacum HOM05D002999 ORTHO05D003137 1.4e-09 68.6 227 26.4
CSS0013325 Camellia sinensis var. sinensis HOM05D006195 ORTHO05D007710 1.8e-09 68.2 66 50.0
HanXRQChr09g0256871 Helianthus annuus HOM05D002999 ORTHO05D003137 1.1e-08 65.5 348 23.3
Pp3c2_19830 Physcomitrium patens HOM05D002999 ORTHO05D003137 1.5e-08 65.1 252 25.0
BolC1t00419H Brassica oleracea HOM05D003825 ORTHO05D004491 2.0e-08 64.7 270 23.7
CARHR242280 Cardamine hirsuta HOM05D003825 ORTHO05D004491 2.5e-08 64.3 270 24.4
C01p04290 Brassica napus HOM05D003825 ORTHO05D004491 3.3e-08 63.9 270 23.7
HanXRQChr15g0466521 Helianthus annuus HOM05D002999 ORTHO05D003137 3.3e-08 63.9 348 23.3
TAR376G0761 Trochodendron aralioides HOM05D003825 ORTHO05D004491 4.3e-08 63.5 242 22.7
A01p03980 Brassica napus HOM05D003825 ORTHO05D004491 5.7e-08 63.2 270 23.7
BraA01t00386Z Brassica rapa HOM05D003825 ORTHO05D004491 5.7e-08 63.2 270 23.7
Migut.M00121 Erythranthe guttata HOM05D001610 ORTHO05D001585 5.7e-08 63.2 237 27.8
HanXRQChr00c0537g0575611 Helianthus annuus HOM05D002999 ORTHO05D003137 5.7e-08 63.2 348 22.7
Sp7g32260 Schrenkiella parvula HOM05D003825 ORTHO05D004491 7.4e-08 62.8 270 24.1
A08p16790 Brassica napus HOM05D003825 ORTHO05D004491 9.7e-08 62.4 250 22.8
C07p60600 Brassica napus HOM05D003825 ORTHO05D004491 9.7e-08 62.4 263 23.2
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 9.7e-08 62.4 263 23.2
Migut.M00119 Erythranthe guttata HOM05D001610 ORTHO05D001585 9.7e-08 62.4 252 27.8
C03p85750 Brassica napus HOM05D003825 ORTHO05D004491 1.3e-07 62.0 243 22.6
BolC3t20866H Brassica oleracea HOM05D003825 ORTHO05D004491 1.3e-07 62.0 243 22.6
BraA08t33644Z Brassica rapa HOM05D003825 ORTHO05D004491 1.3e-07 62.0 250 22.8
AUR62043984 Chenopodium quinoa HOM05D002999 ORTHO05D003137 1.3e-07 62.0 209 25.8
PSO170G3708 Papaver somniferum HOM05D002999 ORTHO05D003137 1.3e-07 62.0 248 23.4
PSO675G6008 Papaver somniferum HOM05D003825 ORTHO05D004491 1.7e-07 61.6 273 22.7
Thhalv10025475m.g Eutrema salsugineum HOM05D003825 ORTHO05D004491 2.2e-07 61.2 270 23.7
Pp3c10_3720 Physcomitrium patens HOM05D002999 ORTHO05D003137 2.2e-07 61.2 252 24.6
AT4G34460 Arabidopsis thaliana HOM05D003825 ORTHO05D004491 2.8e-07 60.8 270 23.7
BcaB03g11831 Brassica carinata HOM05D003825 ORTHO05D004491 2.8e-07 60.8 243 21.8
ECA247G2129 Erigeron canadensis HOM05D002999 ORTHO05D003137 4.8e-07 60.1 257 24.9
PSO302G0054 Papaver somniferum HOM05D002999 ORTHO05D003137 4.8e-07 60.1 239 23.8
Aqoxy2G03169 Aquilegia oxysepala HOM05D002999 ORTHO05D003137 6.3e-07 59.7 269 27.1
SGA_v2.0_scaffold142G35668 Striga asiatica HOM05D002999 ORTHO05D003137 6.3e-07 59.7 352 21.6
Zm00001eb354420 Zea mays HOM05D002999 ORTHO05D003137 6.3e-07 59.7 266 23.3
AagrBONN_evm.TU.Sc2ySwM_362.297 Anthoceros agrestis HOM05D002999 ORTHO05D003137 1.1e-06 58.9 251 24.3
AL7G16770 Arabidopsis lyrata HOM05D003825 ORTHO05D004491 1.1e-06 58.9 212 26.4
Hma1.2p1_0643F.1_g194600 Hydrangea macrophylla HOM05D002999 ORTHO05D003137 1.1e-06 58.9 256 23.8
Potri.014G136000 Populus trichocarpa HOM05D002999 ORTHO05D003137 1.1e-06 58.9 238 25.2
Nitab4.5_0000295g0130 Nicotiana tabacum HOM05D002999 ORTHO05D003137 1.4e-06 58.5 288 24.0
Lalb_Chr02g0142981 Lupinus albus HOM05D002999 ORTHO05D003137 5.3e-06 56.6 359 21.4
Sabra14G0102500 Salix brachista HOM05D002999 ORTHO05D003137 6.9e-06 56.2 150 30.0


User provided reference genes

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