Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1005 Punica granatum HOM05D006899 ORTHO05D008566 1.6e-95 352.8 184 100.0
Cfa023072 Carpinus fangiana HOM05D006899 ORTHO05D008566 2.0e-58 229.6 195 66.7
QL08p044873 Quercus lobata HOM05D006899 ORTHO05D008566 3.4e-58 228.8 195 67.2
Gohir.D07G086300 Gossypium hirsutum HOM05D006899 ORTHO05D008566 3.5e-55 218.8 150 77.3
Gorai.001G092300 Gossypium raimondii HOM05D006899 ORTHO05D008566 4.6e-55 218.4 150 76.7
CiPaw.04G138700 Carya illinoinensis HOM05D006899 ORTHO05D008566 6.0e-55 218.0 194 65.5
Gohir.A07G080700 Gossypium hirsutum HOM05D006899 ORTHO05D008566 3.0e-54 215.7 194 64.9
Potri.002G058000 Populus trichocarpa HOM05D006899 ORTHO05D008566 6.6e-54 214.5 187 66.8
Oeu013822.1 Olea europaea HOM05D006899 ORTHO05D008566 1.1e-53 213.8 187 66.3
Oeu020934.1 Olea europaea HOM05D006899 ORTHO05D008566 1.5e-53 213.4 187 66.3
Haze_13530 Corylus avellana HOM05D006899 ORTHO05D008566 2.1e-52 209.5 230 55.7
Potri.005G204200 Populus trichocarpa HOM05D006899 ORTHO05D008566 2.1e-52 209.5 172 70.3
GSVIVG01020847001 Vitis vinifera HOM05D006899 ORTHO05D008566 2.1e-52 209.5 158 74.1
Rhsim04G0081600 Rhododendron simsii HOM05D006899 ORTHO05D008566 3.6e-52 208.8 195 64.1
vmacro09192 Vaccinium macrocarpon HOM05D006899 ORTHO05D008566 2.4e-51 206.1 194 63.4
Glyma.02G285100 Glycine max HOM05D006899 ORTHO05D008566 4.0e-51 205.3 175 66.3
Nn4g26539 Nelumbo nucifera HOM05D006899 ORTHO05D008566 5.3e-51 204.9 178 68.0
Peaxi162Scf00111g00221 Petunia axillaris HOM05D006899 ORTHO05D008566 9.0e-51 204.1 191 66.0
TWI59G0652 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 9.0e-51 204.1 191 66.0
Sabra02G0047300 Salix brachista HOM05D006899 ORTHO05D008566 1.2e-50 203.8 182 67.6
Thecc.01G170200 Theobroma cacao HOM05D006899 ORTHO05D008566 1.5e-50 203.4 190 64.7
COL.COLO4_08896 Corchorus olitorius HOM05D006899 ORTHO05D008566 2.0e-50 203.0 166 70.5
Nitab4.5_0001883g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.0e-50 203.0 190 65.8
Cpa.g.sc50.104 Carica papaya HOM05D006899 ORTHO05D008566 4.5e-50 201.8 125 84.8
Phvul.008G193700 Phaseolus vulgaris HOM05D006899 ORTHO05D008566 5.8e-50 201.4 189 63.0
VMungo0647G1903 Vigna mungo HOM05D006899 ORTHO05D008566 7.6e-50 201.1 176 65.3
CsaV3_4G031920 Cucumis sativus L. HOM05D006899 ORTHO05D008566 9.9e-50 200.7 150 74.0
Nitab4.5_0002251g0050 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.3e-49 200.3 190 65.3
Ciclev10032884m.g Citrus clementina HOM05D006899 ORTHO05D008566 2.2e-49 199.5 193 62.2
MELO3C026968.2 Cucumis melo HOM05D006899 ORTHO05D008566 2.9e-49 199.1 194 64.4
Prupe.3G176400 Prunus persica HOM05D006899 ORTHO05D008566 2.9e-49 199.1 192 63.0
TPR.G12679 Trifolium pratense HOM05D006899 ORTHO05D008566 4.9e-49 198.4 146 71.9
Glyma.14G029700 Glycine max HOM05D006899 ORTHO05D008566 8.4e-49 197.6 176 65.3
Cc05_g09700 Coffea canephora HOM05D006899 ORTHO05D008566 1.4e-48 196.8 173 66.5
MD09G1149700 Malus domestica HOM05D006899 ORTHO05D008566 1.9e-48 196.4 157 72.0
Medtr5g091190 Medicago truncatula HOM05D006899 ORTHO05D008566 2.4e-48 196.1 167 67.7
PGSC0003DMG400017304 Solanum tuberosum HOM05D006899 ORTHO05D008566 9.3e-48 194.1 143 76.9
FAN09G4704 Fragaria x ananassa HOM05D006899 ORTHO05D008566 1.2e-47 193.7 189 63.5
MD17G1136600 Malus domestica HOM05D006899 ORTHO05D008566 1.6e-47 193.4 172 64.0
Sed0025977 Sechium edule HOM05D006899 ORTHO05D008566 1.6e-47 193.4 191 63.4
LjContig00049g0021241 Lotus japonicus HOM05D006899 ORTHO05D008566 2.1e-47 193.0 187 62.0
FvH4_6g38570 Fragaria vesca HOM05D006899 ORTHO05D008566 2.7e-47 192.6 189 63.0
CANSAT64G2357 Cannabis sativa HOM05D006899 ORTHO05D008566 3.5e-47 192.2 181 64.6
Eucgr.A02015 Eucalyptus grandis HOM05D006899 ORTHO05D008566 4.6e-47 191.8 166 70.5
Sopen07g029600 Solanum pennellii HOM05D006899 ORTHO05D008566 6.0e-47 191.4 143 74.1
MSTRG.12841 Avicennia marina HOM05D006899 ORTHO05D008566 7.9e-47 191.0 173 67.1
Atru.chr6.2058 Acer truncatum HOM05D006899 ORTHO05D008566 1.8e-46 189.9 148 70.9
Duzib138G0065 Durio zibethinus HOM05D006899 ORTHO05D008566 2.3e-46 189.5 182 62.6
Solyc07g056240.3 Solanum lycopersicum HOM05D006899 ORTHO05D008566 3.0e-46 189.1 143 72.7
Aa31LG1G24750 Aethionema arabicum HOM05D006899 ORTHO05D008566 3.9e-46 188.7 189 58.7
arahy.Tifrunner.gnm1.ann1.226PX6 Arachis hypogaea HOM05D006899 ORTHO05D008566 3.9e-46 188.7 176 64.8
TAR627G0648 Trochodendron aralioides HOM05D006899 ORTHO05D008566 5.1e-46 188.3 171 64.9
FAN05G4631 Fragaria x ananassa HOM05D006899 ORTHO05D008566 6.7e-46 188.0 191 60.7
Manes.10G088300 Manihot esculenta HOM05D006899 ORTHO05D008566 6.7e-46 188.0 199 60.3
ClCG11G016470 Citrullus lanatus HOM05D006899 ORTHO05D008566 1.5e-45 186.8 150 69.3
SalBow7G1887 Salvia bowleyana HOM05D006899 ORTHO05D008566 1.5e-45 186.8 164 67.1
SGA_v2.0_scaffold4G02123 Striga asiatica HOM05D006899 ORTHO05D008566 1.9e-45 186.4 191 61.3
arahy.Tifrunner.gnm1.ann1.SNQ1P9 Arachis hypogaea HOM05D006899 ORTHO05D008566 3.3e-45 185.7 176 63.1
THA.LOC104802283 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 5.6e-45 184.9 154 66.9
Actinidia03641 Actinidia chinensis HOM05D006899 ORTHO05D008566 7.4e-45 184.5 124 79.8
AUR62015134 Chenopodium quinoa HOM05D006899 ORTHO05D008566 6.2e-44 181.4 193 59.6
FAN02G3475 Fragaria x ananassa HOM05D006899 ORTHO05D008566 1.1e-43 180.6 185 58.9
Sp4g25100 Schrenkiella parvula HOM05D006899 ORTHO05D008566 1.4e-43 180.3 159 67.9
Migut.E01772 Erythranthe guttata HOM05D006899 ORTHO05D008566 1.8e-43 179.9 183 61.2
RcHm_v2.0_Chr2g0151981 Rosa chinensis HOM05D006899 ORTHO05D008566 3.1e-43 179.1 159 67.3
THA.LOC104803370 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 5.3e-43 178.3 144 68.8
FAN14G2046 Fragaria x ananassa HOM05D006899 ORTHO05D008566 4.5e-42 175.3 121 76.9
BcaC02g07213 Brassica carinata HOM05D006899 ORTHO05D008566 5.8e-42 174.9 178 60.7
C04p70000 Brassica napus HOM05D006899 ORTHO05D008566 5.8e-42 174.9 178 60.7
BolC4t28500H Brassica oleracea HOM05D006899 ORTHO05D008566 5.8e-42 174.9 178 60.7
EL10Ac9g22843 Beta vulgaris HOM05D006899 ORTHO05D008566 4.9e-41 171.8 148 68.2
AUR62017595 Chenopodium quinoa HOM05D006899 ORTHO05D008566 4.9e-41 171.8 181 58.6
AT2G42975 Arabidopsis thaliana HOM05D006899 ORTHO05D008566 6.5e-41 171.4 120 78.3
Sc13g0007020 Simmondsia chinensis HOM05D006899 ORTHO05D008566 6.5e-41 171.4 151 64.9
Dinv09142 Davidia involucrata HOM05D006899 ORTHO05D008566 1.4e-40 170.2 169 60.9
AL4G41610 Arabidopsis lyrata HOM05D006899 ORTHO05D008566 1.9e-40 169.9 120 76.7
Duzib133G1045 Durio zibethinus HOM05D006899 ORTHO05D008566 1.9e-40 169.9 195 53.8
Aqoxy1G02918 Aquilegia oxysepala HOM05D006899 ORTHO05D008566 3.2e-40 169.1 140 69.3
BraA04t18701Z Brassica rapa HOM05D006899 ORTHO05D008566 7.1e-40 167.9 195 55.9
Thhalv10017256m.g Eutrema salsugineum HOM05D006899 ORTHO05D008566 1.2e-39 167.2 119 74.8
CSS0032532 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 1.6e-39 166.8 161 64.6
BcaB06g29274 Brassica carinata HOM05D006899 ORTHO05D008566 2.7e-39 166.0 149 65.8
BNapus_Darmor_BZH_scaffold_64p00160 Brassica napus HOM05D006899 ORTHO05D008566 4.6e-39 165.2 144 66.0
Carub.0004s2544 Capsella rubella HOM05D006899 ORTHO05D008566 4.6e-39 165.2 119 73.1
Hund24233 Selenicereus undatus HOM05D006899 ORTHO05D008566 4.6e-39 165.2 194 55.7
CARHR138030 Cardamine hirsuta HOM05D006899 ORTHO05D008566 1.0e-38 164.1 206 53.9
MBI10_g21113_MAGBIO Magnolia biondii HOM05D006899 ORTHO05D008566 4.8e-36 155.2 188 52.7
Lalb_Chr04g0248871 Lupinus albus HOM05D006899 ORTHO05D008566 1.4e-35 153.7 98 80.6
Lj1P601T16 Lonicera japonica HOM05D006899 ORTHO05D008566 4.1e-35 152.1 87 87.4
Ah.01g013620 Amaranthus hybridus HOM05D006899 ORTHO05D008566 1.2e-34 150.6 100 79.0
CSS0025344 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 1.3e-33 147.1 162 59.3
ECA233G0523 Erigeron canadensis HOM05D006899 ORTHO05D008566 1.3e-33 147.1 139 61.9
HanXRQChr17g0554721 Helianthus annuus HOM05D006899 ORTHO05D008566 2.2e-33 146.4 139 61.2
PSO675G8667 Papaver somniferum HOM05D006899 ORTHO05D008566 4.2e-32 142.1 201 52.7
PSO478G1301 Papaver somniferum HOM05D006899 ORTHO05D008566 2.1e-31 139.8 201 52.2
Os01g0666600 Oryza sativa ssp. japonica HOM05D006899 ORTHO05D008566 1.0e-30 137.5 146 56.2
Lsat_1_v5_gn_8_137860 Lactuca sativa HOM05D006899 ORTHO05D008566 6.7e-30 134.8 138 58.7
CDE05G0801 Ceratophyllum demersum HOM05D006899 ORTHO05D008566 1.6e-28 130.2 132 58.3
PSO541G6147 Papaver somniferum HOM05D006899 ORTHO05D008566 4.8e-28 128.6 127 62.2
ATR0585G139 Amborella trichopoda HOM05D006899 ORTHO05D008566 2.6e-26 122.9 107 61.7
unitig_60.g25592 Utricularia gibba HOM05D006899 ORTHO05D008566 3.4e-26 122.5 135 54.8
Zm00001eb157430 Zea mays HOM05D006899 ORTHO05D008566 7.7e-26 121.3 152 48.7
HPP92_010055 Vanilla planifolia HOM05D006899 ORTHO05D008566 1.7e-25 120.2 120 59.2
Nitab4.5_0004243g0030 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.6e-23 113.6 83 73.5
Hund24244 Selenicereus undatus HOM05D006899 ORTHO05D008566 4.6e-23 112.1 97 66.0
TWI23G0441 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 1.4e-22 110.5 112 62.5
Nitab4.5_0004950g0010 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.0e-21 106.7 81 72.8
Nitab4.5_0009604g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.0e-21 106.7 81 72.8
Pp3c13_6560 Physcomitrium patens HOM05D006899 ORTHO05D008566 1.7e-20 103.6 150 42.0
Mapoly0120s0054 Marchantia polymorpha HOM05D006899 ORTHO05D008566 5.9e-18 95.1 127 45.7
AagrBONN_evm.TU.Sc2ySwM_368.298 Anthoceros agrestis HOM05D006899 ORTHO05D008566 3.2e-16 89.4 97 51.5
Medtr5g016040 Medicago truncatula HOM05D006899 ORTHO05D008566 2.1e-15 86.7 80 61.2
Nitab4.5_0002251g0080 Nicotiana tabacum HOM05D006899 ORTHO05D008566 4.7e-15 85.5 111 48.6
SMO353G0201 Selaginella moellendorffii HOM05D006899 ORTHO05D008566 2.0e-10 70.1 90 47.8
Medtr7g035145 Medicago truncatula HOM05D006899 ORTHO05D008566 2.1e-07 60.1 69 39.1
Duzib130G0001 Durio zibethinus HOM05D006899 ORTHO05D008566 1.4e-06 57.4 90 47.8


User provided reference genes

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