Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 1.1e-78 296.6 149 100.0
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 7.8e-45 184.1 149 65.1
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 1.0e-44 183.7 149 65.8
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 2.3e-44 182.6 148 65.5
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 1.5e-43 179.9 143 64.3
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 1.5e-43 179.9 143 63.6
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 1.9e-43 179.5 149 65.8
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 1.9e-43 179.5 136 68.4
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 4.3e-43 178.3 149 62.4
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 7.3e-43 177.6 143 62.9
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 2.1e-42 176.0 149 64.4
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 4.7e-42 174.9 147 61.9
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 6.2e-42 174.5 147 61.9
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 6.2e-42 174.5 146 63.0
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 1.4e-41 173.3 142 63.4
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 1.4e-41 173.3 146 60.3
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 1.4e-41 173.3 144 66.0
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 5.2e-41 171.4 145 62.8
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 5.2e-41 171.4 150 62.7
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 1.5e-40 169.9 150 61.3
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 2.0e-40 169.5 139 64.0
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 2.6e-40 169.1 149 63.8
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 9.9e-40 167.2 139 61.9
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 1.7e-39 166.4 142 62.7
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 1.7e-39 166.4 137 66.4
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 6.4e-39 164.5 154 59.1
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 2.4e-38 162.5 143 60.8
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 2.4e-38 162.5 138 58.7
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 4.1e-38 161.8 151 61.6
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 5.4e-38 161.4 91 85.7
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 7.1e-38 161.0 148 62.2
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 9.2e-38 160.6 138 61.6
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 1.2e-37 160.2 124 67.7
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 1.6e-37 159.8 153 58.8
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 2.1e-37 159.5 109 70.6
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 2.7e-37 159.1 130 63.1
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 2.7e-37 159.1 111 71.2
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 2.7e-37 159.1 131 67.2
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 3.5e-37 158.7 109 70.6
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 3.5e-37 158.7 109 70.6
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 3.5e-37 158.7 109 70.6
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 3.5e-37 158.7 146 60.3
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 4.6e-37 158.3 90 84.4
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 6.0e-37 157.9 109 70.6
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 7.8e-37 157.5 117 69.2
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 1.0e-36 157.1 109 70.6
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 1.7e-36 156.4 110 69.1
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 1.7e-36 156.4 86 87.2
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 3.0e-36 155.6 111 70.3
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 3.9e-36 155.2 140 61.4
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 3.9e-36 155.2 86 86.0
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 5.1e-36 154.8 155 56.8
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 6.6e-36 154.5 90 84.4
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 6.6e-36 154.5 108 72.2
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 8.6e-36 154.1 128 62.5
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 1.5e-35 153.3 100 74.0
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 1.5e-35 153.3 156 55.8
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 1.9e-35 152.9 99 74.7
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 1.9e-35 152.9 120 67.5
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 2.5e-35 152.5 113 69.0
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 2.5e-35 152.5 113 69.0
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 2.5e-35 152.5 99 77.8
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 3.3e-35 152.1 102 76.5
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 5.6e-35 151.4 125 60.8
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 5.6e-35 151.4 84 84.5
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 7.3e-35 151.0 99 73.7
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 7.3e-35 151.0 86 87.2
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 7.3e-35 151.0 86 87.2
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 9.5e-35 150.6 98 72.4
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 9.5e-35 150.6 102 74.5
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 1.2e-34 150.2 98 78.6
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 1.6e-34 149.8 98 72.4
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 2.8e-34 149.1 86 84.9
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 3.6e-34 148.7 108 72.2
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 6.2e-34 147.9 97 72.2
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 6.2e-34 147.9 148 59.5
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 1.4e-33 146.7 108 68.5
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 1.8e-33 146.4 84 85.7
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 2.4e-33 146.0 97 72.2
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 3.1e-33 145.6 115 63.5
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 3.1e-33 145.6 141 55.3
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 5.2e-33 144.8 113 65.5
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 5.2e-33 144.8 108 70.4
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 1.2e-32 143.7 99 71.7
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 1.5e-32 143.3 91 73.6
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 2.6e-32 142.5 100 73.0
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 1.3e-31 140.2 88 78.4
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 2.9e-31 139.0 82 81.7
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 8.4e-31 137.5 83 80.7
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 1.9e-30 136.3 80 81.2
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 4.1e-30 135.2 104 67.3
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 1.3e-28 130.2 74 83.8
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 4.3e-27 125.2 70 85.7
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 9.6e-27 124.0 108 64.8
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 2.1e-26 122.9 76 75.0
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 3.6e-26 122.1 143 50.3
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 4.7e-26 121.7 80 70.0
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 1.2e-24 117.1 76 69.7
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 8.4e-23 110.9 76 68.4
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 3.2e-22 109.0 75 69.3
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 3.9e-20 102.1 79 63.3
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 5.6e-19 98.2 123 49.6
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 3.6e-18 95.5 52 84.6
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 4.5e-16 88.6 65 69.2
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 9.9e-16 87.4 69 69.6
BcaNung00854 Brassica carinata HOM05D007380 ORTHO05D009269 2.4e-09 66.2 89 42.7


User provided reference genes

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