Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 2.0e-209 732.6 503 100.0
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 6.7e-144 515.0 315 81.6
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 8.7e-144 514.6 322 80.4
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 8.7e-144 514.6 316 81.0
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 9.7e-143 511.1 320 79.1
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 5.9e-140 501.9 316 79.4
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 5.9e-140 501.9 316 79.4
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 1.7e-139 500.4 316 79.7
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 3.8e-139 499.2 320 78.1
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 5.0e-139 498.8 321 79.1
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 6.5e-139 498.4 317 79.5
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 3.2e-138 496.1 320 79.7
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 1.6e-137 493.8 310 80.3
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 7.9e-137 491.5 318 78.9
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 8.8e-136 488.0 316 79.1
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 1.1e-135 487.6 317 77.9
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 1.9e-135 486.9 314 80.3
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 1.9e-135 486.9 311 78.5
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 5.7e-135 485.3 321 77.3
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 5.7e-135 485.3 315 78.4
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 7.4e-135 485.0 321 77.3
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 1.3e-134 484.2 321 76.9
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 1.3e-134 484.2 317 75.7
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 1.7e-134 483.8 320 76.9
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 2.8e-134 483.0 336 74.1
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 4.8e-134 482.3 318 78.0
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 1.1e-133 481.1 316 78.5
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 1.4e-133 480.7 314 76.8
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 1.4e-133 480.7 318 76.4
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 1.8e-133 480.3 315 76.5
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 3.1e-133 479.6 337 73.9
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 3.1e-133 479.6 312 78.8
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 4.1e-133 479.2 317 77.6
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 5.3e-133 478.8 312 78.2
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 9.1e-133 478.0 323 77.1
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 2.6e-132 476.5 314 77.4
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 2.6e-132 476.5 316 76.3
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 7.7e-132 474.9 312 77.6
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 1.0e-131 474.6 320 76.9
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 1.0e-131 474.6 310 76.5
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 1.3e-131 474.2 315 75.9
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 1.7e-131 473.8 315 75.2
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 2.2e-131 473.4 325 74.5
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 1.1e-130 471.1 315 75.6
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 1.1e-130 471.1 321 74.5
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 1.4e-130 470.7 315 77.1
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 2.5e-130 469.9 323 75.9
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 4.2e-130 469.2 315 76.5
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 5.5e-130 468.8 320 75.0
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 1.6e-129 467.2 310 77.4
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 1.6e-129 467.2 314 77.4
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 6.1e-129 465.3 313 75.7
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 6.1e-129 465.3 320 74.4
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 3.0e-128 463.0 351 68.9
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 1.5e-127 460.7 316 75.3
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 5.7e-127 458.8 314 73.6
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 9.7e-127 458.0 318 73.3
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 9.7e-127 458.0 315 76.5
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 9.7e-127 458.0 321 72.6
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 4.8e-126 455.7 316 74.7
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 6.3e-126 455.3 317 73.2
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 6.3e-126 455.3 316 74.1
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 6.3e-126 455.3 312 75.0
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 2.4e-125 453.4 317 71.0
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 5.3e-125 452.2 308 76.0
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 6.9e-125 451.8 320 71.9
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 2.0e-124 450.3 321 71.7
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 2.0e-124 450.3 321 71.7
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 3.4e-124 449.5 316 74.4
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 4.5e-124 449.1 320 71.2
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 5.9e-124 448.7 322 71.4
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 1.0e-123 448.0 322 72.0
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 1.3e-123 447.6 321 71.0
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 2.2e-123 446.8 317 70.3
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 1.9e-122 443.7 315 72.7
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 1.6e-121 440.7 319 69.9
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 4.7e-121 439.1 334 71.3
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.4e-120 437.6 349 68.5
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 3.0e-120 436.4 389 62.0
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 1.5e-119 434.1 314 70.4
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 1.5e-119 434.1 313 69.3
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 3.3e-119 433.0 314 70.4
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 8.2e-118 428.3 332 67.5
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 3.1e-117 426.4 293 73.0
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 1.0e-115 421.4 321 68.2
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 1.1e-114 417.9 320 68.4
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 1.0e-107 394.8 255 78.0
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 1.5e-106 391.0 556 44.6
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 8.0e-105 385.2 315 63.2
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 1.5e-103 380.9 306 65.7
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 2.0e-103 380.6 294 66.0
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 1.8e-101 374.0 265 71.7
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 3.6e-97 359.8 276 70.3
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 2.9e-91 340.1 229 76.0
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 4.4e-87 326.2 219 73.1
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 7.0e-85 318.9 286 57.3
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 7.8e-84 315.5 222 73.0
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 3.1e-72 276.9 187 75.4
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 4.6e-68 263.1 312 52.9
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 1.4e-64 251.5 188 72.3
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 4.9e-54 216.5 145 70.3
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 5.1e-51 206.5 151 68.2
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 7.6e-47 192.6 174 60.9
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 5.3e-40 169.9 260 37.3
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 1.9e-29 134.8 193 45.6
Os06g0708900 Oryza sativa ssp. japonica HOM05D006577 ORTHO05D008428 1.3e-27 128.6 93 71.0
Zm00001eb395460 Zea mays HOM05D006577 ORTHO05D008428 1.8e-27 128.3 103 68.0
Zm00001eb339160 Zea mays HOM05D006577 ORTHO05D008428 6.7e-27 126.3 79 78.5
CARHR123800 Cardamine hirsuta HOM05D006577 ORTHO05D008428 1.5e-26 125.2 69 81.2
VMungo0251G3731 Vigna mungo HOM05D006577 ORTHO05D008428 1.4e-24 118.6 90 67.8
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 4.5e-23 113.6 117 59.8
Nitab4.5_0000030g0480 Nicotiana tabacum HOM05D006577 ORTHO05D008428 3.9e-19 100.5 62 77.4
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 1.5e-18 98.6 64 78.1
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 5.7e-18 96.7 64 76.6
Lj3C28T3 Lonicera japonica HOM05D006577 ORTHO05D008428 6.3e-17 93.2 50 88.0
Lj3A8T28 Lonicera japonica HOM05D006577 ORTHO05D008428 5.3e-16 90.1 50 86.0
AUR62042461 Chenopodium quinoa HOM05D006577 ORTHO05D008428 9.1e-16 89.4 62 71.0
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 1.2e-15 89.0 65 73.8
TPR.G13376 Trifolium pratense HOM05D006577 ORTHO05D008428 6.5e-14 83.2 67 65.7
BcaB08g35318 Brassica carinata HOM05D006577 ORTHO05D008428 2.7e-12 77.8 38 86.8
FvH4_3g03932 Fragaria vesca HOM05D006577 ORTHO05D008428 6.1e-12 76.6 39 89.7
Cre06.g280700 Chlamydomonas reinhardtii HOM05D006577 ORTHO05D008428 7.9e-12 76.3 125 36.8


User provided reference genes

Program Settings