Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G0623 Punica granatum HOM05D007049 ORTHO05D008896 4.2e-44 181.0 94 100.0
COL.COLO4_06913 Corchorus olitorius HOM05D007049 ORTHO05D008896 3.7e-32 141.4 88 80.7
Nitab4.5_0000213g0160 Nicotiana tabacum HOM05D007049 ORTHO05D008896 6.2e-32 140.6 88 79.5
Duzib177G1207 Durio zibethinus HOM05D007049 ORTHO05D008896 1.8e-31 139.0 87 80.5
Nitab4.5_0000398g0030 Nicotiana tabacum HOM05D007049 ORTHO05D008896 1.8e-31 139.0 88 78.4
CAN.G4100.1 Capsicum annuum HOM05D007049 ORTHO05D008896 2.4e-31 138.7 90 75.6
QL04p010524 Quercus lobata HOM05D007049 ORTHO05D008896 2.4e-31 138.7 91 76.9
TWI12G1157 Tripterygium wilfordii HOM05D007049 ORTHO05D008896 3.1e-31 138.3 86 81.4
CiPaw.15G066500 Carya illinoinensis HOM05D007049 ORTHO05D008896 4.0e-31 137.9 92 73.9
Peaxi162Scf00078g00061 Petunia axillaris HOM05D007049 ORTHO05D008896 4.0e-31 137.9 88 76.1
Prupe.8G009200 Prunus persica HOM05D007049 ORTHO05D008896 4.0e-31 137.9 90 76.7
MD10G1006000 Malus domestica HOM05D007049 ORTHO05D008896 5.3e-31 137.5 89 78.7
LjContig00222g0016429 Lotus japonicus HOM05D007049 ORTHO05D008896 9.0e-31 136.7 89 79.8
Lalb_Chr03g0041921 Lupinus albus HOM05D007049 ORTHO05D008896 9.0e-31 136.7 85 83.5
Prupe.8G008400 Prunus persica HOM05D007049 ORTHO05D008896 1.2e-30 136.3 90 76.7
Gohir.D13G119000 Gossypium hirsutum HOM05D007049 ORTHO05D008896 1.5e-30 136.0 85 81.2
Gorai.013G133400 Gossypium raimondii HOM05D007049 ORTHO05D008896 1.5e-30 136.0 85 81.2
Gohir.A13G115800 Gossypium hirsutum HOM05D007049 ORTHO05D008896 2.0e-30 135.6 85 81.2
CAN.G608.33 Capsicum annuum HOM05D007049 ORTHO05D008896 2.6e-30 135.2 87 75.9
Cc10_g08690 Coffea canephora HOM05D007049 ORTHO05D008896 4.5e-30 134.4 91 74.7
Ca_24471_v3 Cicer arietinum L. HOM05D007049 ORTHO05D008896 5.8e-30 134.0 84 81.0
THA.LOC104824284 Tarenaya hassleriana HOM05D007049 ORTHO05D008896 5.8e-30 134.0 89 77.5
CANSAT25G3584 Cannabis sativa HOM05D007049 ORTHO05D008896 7.6e-30 133.7 82 82.9
Oeu023195.1 Olea europaea HOM05D007049 ORTHO05D008896 7.6e-30 133.7 88 76.1
Eucgr.F02581 Eucalyptus grandis HOM05D007049 ORTHO05D008896 9.9e-30 133.3 78 87.2
Solyc09g007070.1 Solanum lycopersicum HOM05D007049 ORTHO05D008896 1.3e-29 132.9 88 73.9
Sopen09g001930 Solanum pennellii HOM05D007049 ORTHO05D008896 1.3e-29 132.9 88 73.9
PGSC0003DMG401002024 Solanum tuberosum HOM05D007049 ORTHO05D008896 1.3e-29 132.9 88 73.9
Psat2g187280 Pisum sativum HOM05D007049 ORTHO05D008896 1.7e-29 132.5 85 81.2
FAN18G1167 Fragaria x ananassa HOM05D007049 ORTHO05D008896 2.2e-29 132.1 92 72.8
FAN18G2563 Fragaria x ananassa HOM05D007049 ORTHO05D008896 2.2e-29 132.1 92 72.8
Psat7g180160 Pisum sativum HOM05D007049 ORTHO05D008896 2.2e-29 132.1 85 81.2
Hma1.2p1_0400F.1_g144580 Hydrangea macrophylla HOM05D007049 ORTHO05D008896 2.9e-29 131.7 89 77.5
Sabra01G0012500 Salix brachista HOM05D007049 ORTHO05D008896 4.9e-29 131.0 92 72.8
Thecc.08G177900 Theobroma cacao HOM05D007049 ORTHO05D008896 4.9e-29 131.0 87 77.0
Cpa.g.sc19.285 Carica papaya HOM05D007049 ORTHO05D008896 6.4e-29 130.6 82 81.7
FAN08G2573 Fragaria x ananassa HOM05D007049 ORTHO05D008896 6.4e-29 130.6 81 81.5
VMungo1215G2220 Vigna mungo HOM05D007049 ORTHO05D008896 6.4e-29 130.6 85 81.2
Nn5g27287 Nelumbo nucifera HOM05D007049 ORTHO05D008896 8.4e-29 130.2 93 72.0
Migut.C01376 Erythranthe guttata HOM05D007049 ORTHO05D008896 1.1e-28 129.8 88 72.7
Glyma.11G013800 Glycine max HOM05D007049 ORTHO05D008896 1.1e-28 129.8 84 81.0
Phvul.002G036400 Phaseolus vulgaris HOM05D007049 ORTHO05D008896 1.1e-28 129.8 85 80.0
RcHm_v2.0_Chr7g0212661 Rosa chinensis HOM05D007049 ORTHO05D008896 1.1e-28 129.8 90 71.1
TPR.G37942 Trifolium pratense HOM05D007049 ORTHO05D008896 1.4e-28 129.4 82 81.7
Psat7g180120 Pisum sativum HOM05D007049 ORTHO05D008896 2.5e-28 128.6 85 78.8
TAR624G0348 Trochodendron aralioides HOM05D007049 ORTHO05D008896 2.5e-28 128.6 93 72.0
arahy.Tifrunner.gnm1.ann1.6H88WF Arachis hypogaea HOM05D007049 ORTHO05D008896 3.2e-28 128.3 88 75.0
CARHR134570 Cardamine hirsuta HOM05D007049 ORTHO05D008896 3.2e-28 128.3 89 74.2
Sed0002937 Sechium edule HOM05D007049 ORTHO05D008896 5.5e-28 127.5 93 72.0
Thhalv10017481m.g Eutrema salsugineum HOM05D007049 ORTHO05D008896 7.1e-28 127.1 89 73.0
RcHm_v2.0_Chr7g0212551 Rosa chinensis HOM05D007049 ORTHO05D008896 7.1e-28 127.1 82 76.8
Carub.0004s2178 Capsella rubella HOM05D007049 ORTHO05D008896 9.3e-28 126.7 89 74.2
RcHm_v2.0_Chr7g0212501 Rosa chinensis HOM05D007049 ORTHO05D008896 9.3e-28 126.7 85 75.3
SalBow7G2968 Salvia bowleyana HOM05D007049 ORTHO05D008896 1.6e-27 125.9 86 70.9
Medtr5g008340 Medicago truncatula HOM05D007049 ORTHO05D008896 2.1e-27 125.6 81 81.5
Psat7g180080 Pisum sativum HOM05D007049 ORTHO05D008896 2.1e-27 125.6 85 76.5
TAR624G1340 Trochodendron aralioides HOM05D007049 ORTHO05D008896 2.1e-27 125.6 81 79.0
Aa31LG5G19930 Aethionema arabicum HOM05D007049 ORTHO05D008896 2.7e-27 125.2 89 73.0
Cfa019294 Carpinus fangiana HOM05D007049 ORTHO05D008896 2.7e-27 125.2 93 73.1
BcaC02g07431 Brassica carinata HOM05D007049 ORTHO05D008896 4.6e-27 124.4 82 76.8
C04p67530 Brassica napus HOM05D007049 ORTHO05D008896 4.6e-27 124.4 82 76.8
CSS0000179 Camellia sinensis var. sinensis HOM05D007049 ORTHO05D008896 4.6e-27 124.4 91 69.2
AL4G37190 Arabidopsis lyrata HOM05D007049 ORTHO05D008896 6.0e-27 124.0 89 71.9
Ciclev10023082m.g Citrus clementina HOM05D007049 ORTHO05D008896 7.9e-27 123.6 78 79.5
ClCG08G001090 Citrullus lanatus HOM05D007049 ORTHO05D008896 1.3e-26 122.9 83 75.9
Sc20g0003280 Simmondsia chinensis HOM05D007049 ORTHO05D008896 1.3e-26 122.9 74 85.1
MBI13_g15314_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 1.8e-26 122.5 82 75.6
Psat7g195680 Pisum sativum HOM05D007049 ORTHO05D008896 1.8e-26 122.5 85 77.6
Rhsim08G0116100 Rhododendron simsii HOM05D007049 ORTHO05D008896 2.3e-26 122.1 77 81.8
arahy.Tifrunner.gnm1.ann1.CT79FY Arachis hypogaea HOM05D007049 ORTHO05D008896 3.9e-26 121.3 84 73.8
ECA248G1776 Erigeron canadensis HOM05D007049 ORTHO05D008896 5.1e-26 120.9 92 68.5
MBI13_g30327_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 5.1e-26 120.9 82 74.4
BcaB06g29104 Brassica carinata HOM05D007049 ORTHO05D008896 6.7e-26 120.6 83 75.9
BolC4t28250H Brassica oleracea HOM05D007049 ORTHO05D008896 6.7e-26 120.6 83 75.9
Sabra01G0012700 Salix brachista HOM05D007049 ORTHO05D008896 6.7e-26 120.6 85 72.9
A04p30310 Brassica napus HOM05D007049 ORTHO05D008896 8.7e-26 120.2 83 74.7
EL10Ac7g16149 Beta vulgaris HOM05D007049 ORTHO05D008896 1.5e-25 119.4 78 76.9
BraA04t18476Z Brassica rapa HOM05D007049 ORTHO05D008896 1.5e-25 119.4 83 74.7
MELO3C022175.2 Cucumis melo HOM05D007049 ORTHO05D008896 1.5e-25 119.4 78 75.6
DCAR_017595 Daucus carota HOM05D007049 ORTHO05D008896 1.9e-25 119.0 85 71.8
AT2G39725 Arabidopsis thaliana HOM05D007049 ORTHO05D008896 2.5e-25 118.6 89 69.7
Prupe.8G008800 Prunus persica HOM05D007049 ORTHO05D008896 2.5e-25 118.6 72 84.7
DCAR_006853 Daucus carota HOM05D007049 ORTHO05D008896 3.3e-25 118.2 85 70.6
Os08g0278600 Oryza sativa ssp. japonica HOM05D007049 ORTHO05D008896 3.3e-25 118.2 82 69.5
Ah.05g168610 Amaranthus hybridus HOM05D007049 ORTHO05D008896 4.3e-25 117.9 93 64.5
AUR62022356 Chenopodium quinoa HOM05D007049 ORTHO05D008896 4.3e-25 117.9 91 62.6
AUR62034352 Chenopodium quinoa HOM05D007049 ORTHO05D008896 4.3e-25 117.9 91 62.6
CsaV3_5G039970 Cucumis sativus L. HOM05D007049 ORTHO05D008896 4.3e-25 117.9 78 74.4
unitig_46.g17984 Utricularia gibba HOM05D007049 ORTHO05D008896 4.3e-25 117.9 88 70.5
Sp4g21990 Schrenkiella parvula HOM05D007049 ORTHO05D008896 7.4e-25 117.1 89 67.4
FAN04G0010 Fragaria x ananassa HOM05D007049 ORTHO05D008896 1.3e-24 116.3 80 72.5
Zm00001eb026180 Zea mays HOM05D007049 ORTHO05D008896 1.6e-24 115.9 89 61.8
HanXRQChr10g0289041 Helianthus annuus HOM05D007049 ORTHO05D008896 2.1e-24 115.5 88 67.0
RcHm_v2.0_Chr6g0251481 Rosa chinensis HOM05D007049 ORTHO05D008896 8.2e-24 113.6 76 77.6
HanXRQChr04g0114811 Helianthus annuus HOM05D007049 ORTHO05D008896 4.0e-23 111.3 88 64.8
Aqoxy3G02546 Aquilegia oxysepala HOM05D007049 ORTHO05D008896 3.4e-22 108.2 76 69.7
PSO017G7166 Papaver somniferum HOM05D007049 ORTHO05D008896 7.6e-22 107.1 83 67.5
HPP92_017350 Vanilla planifolia HOM05D007049 ORTHO05D008896 2.2e-21 105.5 88 65.9
FAN13G1882 Fragaria x ananassa HOM05D007049 ORTHO05D008896 6.5e-21 104.0 72 70.8
Potri.001G018100 Populus trichocarpa HOM05D007049 ORTHO05D008896 8.4e-21 103.6 63 84.1
SGA_v2.0_scaffold118G32610 Striga asiatica HOM05D007049 ORTHO05D008896 4.2e-20 101.3 68 75.0
SHI21473 Sapria himalayana HOM05D000105 ORTHO05D000023 9.3e-20 100.1 67 74.6
Manes.01G011600 Manihot esculenta HOM05D007049 ORTHO05D008896 1.2e-19 99.8 63 82.5
Prupe.8G009100 Prunus persica HOM05D007049 ORTHO05D008896 6.0e-19 97.4 88 60.2
ATR0057G071 Amborella trichopoda HOM05D007049 ORTHO05D008896 6.7e-18 94.0 77 61.0
SMO353G0203 Selaginella moellendorffii HOM05D007049 ORTHO05D008896 5.7e-17 90.9 76 60.5
Pp3c4_6780 Physcomitrium patens HOM05D007049 ORTHO05D008896 2.2e-16 89.0 77 63.6
MD05G1008200 Malus domestica HOM05D007049 ORTHO05D008896 6.9e-15 84.0 58 75.9
Mapoly0004s0187 Marchantia polymorpha HOM05D007049 ORTHO05D008896 2.6e-14 82.0 72 61.1
MCO05G024 Micromonas commoda HOM05D007049 ORTHO05D008896 5.7e-09 64.3 81 43.2
Lsat_1_v5_gn_1_45401 Lactuca sativa HOM05D007049 ORTHO05D008896 4.8e-08 61.2 46 63.0
A04p30320 Brassica napus HOM05D007049 ORTHO05D008896 2.4e-07 58.9 44 75.0


User provided reference genes

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